RNA–Protein interactions for RNA: ENST00000427490.1

RAB28P5-201, Transcript of RAB28, member RAS oncogene family pseudogene 5, humanhuman

BASIC

Gene RAB28P5, Length 651 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P5-201ENST00000427490 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
RAB28P5-201ENST00000427490 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
RAB28P5-201ENST00000427490 POTEDQ86YR6 584 aa15.22■□□□□ 0.03
RAB28P5-201ENST00000427490 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
RAB28P5-201ENST00000427490 PHF23Q9BUL5 403 aaPredicted RBP14.39□□□□□ -0.11
RAB28P5-201ENST00000427490 FOXD1Q16676 465 aa13.86□□□□□ -0.19
RAB28P5-201ENST00000427490 MSH5O43196 834 aa13.5□□□□□ -0.25
RAB28P5-201ENST00000427490 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
RAB28P5-201ENST00000427490 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
RAB28P5-201ENST00000427490 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
RAB28P5-201ENST00000427490 ADRA2BP18089 450 aa12.07□□□□□ -0.48
RAB28P5-201ENST00000427490 PLPPR3Q6T4P5 718 aa11.98□□□□□ -0.49
RAB28P5-201ENST00000427490 POTEHQ6S545 545 aa11.72□□□□□ -0.53
RAB28P5-201ENST00000427490 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
RAB28P5-201ENST00000427490 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
RAB28P5-201ENST00000427490 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
RAB28P5-201ENST00000427490 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
RAB28P5-201ENST00000427490 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
RAB28P5-201ENST00000427490 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
RAB28P5-201ENST00000427490 HOXD11P31277 338 aaPredicted RBP10.64□□□□□ -0.71
RAB28P5-201ENST00000427490 PPP4R3CPQ6ZMV5 832 aa10.41□□□□□ -0.74
RAB28P5-201ENST00000427490 SP7Q8TDD2 431 aaPredicted RBP10.41□□□□□ -0.74
RAB28P5-201ENST00000427490 RNF216Q9NWF9 866 aaPredicted RBP10.41□□□□□ -0.74
RAB28P5-201ENST00000427490 DNAJC5BQ9UF47 199 aa10.39□□□□□ -0.75
RAB28P5-201ENST00000427490 CNKSR2Q8WXI2 1034 aa10.36□□□□□ -0.75
RAB28P5-201ENST00000427490 PLSCR2Q9NRY7 297 aa10.3□□□□□ -0.76
RAB28P5-201ENST00000427490 DSG3P32926 999 aa10.24□□□□□ -0.77
RAB28P5-201ENST00000427490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAB28P5-201ENST00000427490 CAPN15O75808 1086 aa10.12□□□□□ -0.79
RAB28P5-201ENST00000427490 CHRDL2Q6WN34 429 aa10.11□□□□□ -0.79
RAB28P5-201ENST00000427490 SPINK5Q9NQ38 1064 aaPredicted RBP9.99□□□□□ -0.81
RAB28P5-201ENST00000427490 NCBP3Q53F19 620 aaKnown RBP9.86□□□□□ -0.83
RAB28P5-201ENST00000427490 U3KPZ7 1027 aaPredicted RBP9.86□□□□□ -0.83
RAB28P5-201ENST00000427490 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
RAB28P5-201ENST00000427490 HAX1O00165 279 aa9.84□□□□□ -0.83
RAB28P5-201ENST00000427490 LHX8Q68G74 356 aa9.77□□□□□ -0.85
RAB28P5-201ENST00000427490 ABCB7O75027 752 aa9.75□□□□□ -0.85
RAB28P5-201ENST00000427490 TRHP20396 242 aaPredicted RBP9.68□□□□□ -0.86
RAB28P5-201ENST00000427490 NPM3O75607 178 aaKnown RBP9.66□□□□□ -0.86
RAB28P5-201ENST00000427490 ZNF219Q9P2Y4 722 aaPredicted RBP9.62□□□□□ -0.87
RAB28P5-201ENST00000427490 APLP2Q06481 763 aa9.6□□□□□ -0.87
RAB28P5-201ENST00000427490 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
RAB28P5-201ENST00000427490 EVX2Q03828 476 aa9.5□□□□□ -0.89
RAB28P5-201ENST00000427490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.42□□□□□ -0.9
RAB28P5-201ENST00000427490 HNRNPUL2Q1KMD3 747 aaKnown RBP9.42□□□□□ -0.9
RAB28P5-201ENST00000427490 SLC4A2P04920 1241 aa9.36□□□□□ -0.91
RAB28P5-201ENST00000427490 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
RAB28P5-201ENST00000427490 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
RAB28P5-201ENST00000427490 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
RAB28P5-201ENST00000427490 POTEMA6NI47 508 aa9.28□□□□□ -0.92
RAB28P5-201ENST00000427490 GABBR2O75899 941 aa9.26□□□□□ -0.93
RAB28P5-201ENST00000427490 POLA2Q14181 598 aa9.26□□□□□ -0.93
RAB28P5-201ENST00000427490 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
RAB28P5-201ENST00000427490 POTEGQ6S5H5 508 aa9.2□□□□□ -0.94
RAB28P5-201ENST00000427490 PCDH10Q9P2E7 1040 aa9.17□□□□□ -0.94
RAB28P5-201ENST00000427490 PITPNM1O00562 1244 aa9.16□□□□□ -0.94
RAB28P5-201ENST00000427490 C19orf67A6NJJ6 358 aa9.05□□□□□ -0.96
RAB28P5-201ENST00000427490 ZBTB12Q9Y330 459 aaPredicted RBP9.02□□□□□ -0.97
RAB28P5-201ENST00000427490 POTEIP0CG38 1075 aa9□□□□□ -0.97
RAB28P5-201ENST00000427490 MYCNP04198 464 aaPredicted RBP8.97□□□□□ -0.97
RAB28P5-201ENST00000427490 PRKAR2AP13861 404 aaKnown RBP8.96□□□□□ -0.98
RAB28P5-201ENST00000427490 OSCARQ8IYS5 282 aa8.96□□□□□ -0.98
RAB28P5-201ENST00000427490 OTUD5Q96G74 571 aa8.93□□□□□ -0.98
RAB28P5-201ENST00000427490 KCNA4P22459 653 aa8.92□□□□□ -0.98
RAB28P5-201ENST00000427490 DCBLD2Q96PD2 775 aa8.84□□□□□ -0.99
RAB28P5-201ENST00000427490 ATF5Q9Y2D1 282 aaPredicted RBP8.78□□□□□ -1
RAB28P5-201ENST00000427490 CLEC11AQ9Y240 323 aa8.76□□□□□ -1.01
RAB28P5-201ENST00000427490 POTEB2H3BUK9 544 aa8.69□□□□□ -1.02
RAB28P5-201ENST00000427490 CLCN6P51797 869 aa8.69□□□□□ -1.02
RAB28P5-201ENST00000427490 SPDYE1Q8NFV5 336 aaPredicted RBP8.69□□□□□ -1.02
RAB28P5-201ENST00000427490 FAM163AQ96GL9 167 aaPredicted RBP8.68□□□□□ -1.02
RAB28P5-201ENST00000427490 SPDYE2BA6NHP3 402 aa8.67□□□□□ -1.02
RAB28P5-201ENST00000427490 SPDYE6P0CI01 402 aa8.67□□□□□ -1.02
RAB28P5-201ENST00000427490 SPDYE2Q495Y8 402 aa8.67□□□□□ -1.02
RAB28P5-201ENST00000427490 CHADLQ6NUI6 762 aa8.61□□□□□ -1.03
RAB28P5-201ENST00000427490 CD44P16070 742 aaKnown RBP8.6□□□□□ -1.03
RAB28P5-201ENST00000427490 CDAN1Q8IWY9 1227 aa8.59□□□□□ -1.03
RAB28P5-201ENST00000427490 LCE2DQ5TA82 110 aaPredicted RBP8.58□□□□□ -1.04
RAB28P5-201ENST00000427490 FBLN2P98095 1184 aa8.55□□□□□ -1.04
RAB28P5-201ENST00000427490 FOXD4L1Q9NU39 408 aa8.54□□□□□ -1.04
RAB28P5-201ENST00000427490 MMRN1Q13201 1228 aa8.51□□□□□ -1.05
RAB28P5-201ENST00000427490 ZNF692Q9BU19 519 aaPredicted RBP8.51□□□□□ -1.05
RAB28P5-201ENST00000427490 PRR29P0C7W0 189 aa8.5□□□□□ -1.05
RAB28P5-201ENST00000427490 MAMSTRQ6ZN01 415 aa8.45□□□□□ -1.06
RAB28P5-201ENST00000427490 SSUH2Q9Y2M2 353 aa8.45□□□□□ -1.06
RAB28P5-201ENST00000427490 FARP1Q9Y4F1 1045 aaPredicted RBP8.4□□□□□ -1.06
RAB28P5-201ENST00000427490 SPNS2Q8IVW8 549 aa8.38□□□□□ -1.07
RAB28P5-201ENST00000427490 GALR2O43603 387 aaPredicted RBP8.37□□□□□ -1.07
RAB28P5-201ENST00000427490 SCUBE2Q9NQ36 999 aa8.36□□□□□ -1.07
RAB28P5-201ENST00000427490 PABPN1Q86U42 306 aaKnown RBP eCLIP8.34□□□□□ -1.07
RAB28P5-201ENST00000427490 ZNF579Q8NAF0 562 aaKnown RBP8.34□□□□□ -1.07
RAB28P5-201ENST00000427490 SLC4A1APQ9BWU0 796 aaKnown RBP8.34□□□□□ -1.07
RAB28P5-201ENST00000427490 POTEJP0CG39 1038 aa8.33□□□□□ -1.08
RAB28P5-201ENST00000427490 MKRN4PQ13434 485 aaPredicted RBP8.33□□□□□ -1.08
RAB28P5-201ENST00000427490 ZRANB1Q9UGI0 708 aa8.33□□□□□ -1.08
RAB28P5-201ENST00000427490 ATXN8OSP0DMR3 200 aa8.32□□□□□ -1.08
RAB28P5-201ENST00000427490 METRNQ9UJH8 293 aa8.3□□□□□ -1.08
RAB28P5-201ENST00000427490 PELP1Q8IZL8 1130 aaKnown RBP8.28□□□□□ -1.08
RAB28P5-201ENST00000427490 C7P10643 843 aa8.22□□□□□ -1.09
RAB28P5-201ENST00000427490 SLC39A7Q92504 469 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms