RNA–Protein interactions for RNA: ENST00000427247.1

AC024601.1-201, humanhuman

TSL 3 BASIC

Gene AC024601.1, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC024601.1-201ENST00000427247 AEBP2Q6ZN18 517 aaPredicted RBP30.71■■■□□ 2.51
AC024601.1-201ENST00000427247 CHIC1Q5VXU3 224 aa29.63■■■□□ 2.33
AC024601.1-201ENST00000427247 SENP3Q9H4L4 574 aaPredicted RBP26.15■■□□□ 1.78
AC024601.1-201ENST00000427247 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
AC024601.1-201ENST00000427247 FOXD1Q16676 465 aa24.3■■□□□ 1.48
AC024601.1-201ENST00000427247 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
AC024601.1-201ENST00000427247 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
AC024601.1-201ENST00000427247 ADRA2BP18089 450 aa22.98■■□□□ 1.27
AC024601.1-201ENST00000427247 PIAS4Q8N2W9 510 aaPredicted RBP22.78■■□□□ 1.24
AC024601.1-201ENST00000427247 MSH5O43196 834 aa22.6■■□□□ 1.21
AC024601.1-201ENST00000427247 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
AC024601.1-201ENST00000427247 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.97
AC024601.1-201ENST00000427247 PPP4R3CPQ6ZMV5 832 aa20.97■□□□□ 0.95
AC024601.1-201ENST00000427247 MAPK8IP2Q13387 824 aaPredicted RBP20.96■□□□□ 0.95
AC024601.1-201ENST00000427247 DMRT2Q9Y5R5 561 aa20.82■□□□□ 0.92
AC024601.1-201ENST00000427247 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
AC024601.1-201ENST00000427247 NCBP3Q53F19 620 aaKnown RBP20.31■□□□□ 0.84
AC024601.1-201ENST00000427247 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
AC024601.1-201ENST00000427247 RNF216Q9NWF9 866 aaPredicted RBP20.21■□□□□ 0.83
AC024601.1-201ENST00000427247 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
AC024601.1-201ENST00000427247 KCNA4P22459 653 aa19.99■□□□□ 0.79
AC024601.1-201ENST00000427247 DCAF8L1A6NGE4 600 aa19.8■□□□□ 0.76
AC024601.1-201ENST00000427247 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
AC024601.1-201ENST00000427247 RNF39Q9H2S5 420 aa19.32■□□□□ 0.68
AC024601.1-201ENST00000427247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.2■□□□□ 0.66
AC024601.1-201ENST00000427247 C1QBPQ07021 282 aaKnown RBP19.08■□□□□ 0.64
AC024601.1-201ENST00000427247 CACNB1Q02641 598 aaPredicted RBP19.05■□□□□ 0.64
AC024601.1-201ENST00000427247 SLC4A2P04920 1241 aa19■□□□□ 0.63
AC024601.1-201ENST00000427247 SLC4A1APQ9BWU0 796 aaKnown RBP18.96■□□□□ 0.63
AC024601.1-201ENST00000427247 U3KPZ7 1027 aaPredicted RBP18.89■□□□□ 0.61
AC024601.1-201ENST00000427247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
AC024601.1-201ENST00000427247 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
AC024601.1-201ENST00000427247 FOXD4L1Q9NU39 408 aa18.54■□□□□ 0.56
AC024601.1-201ENST00000427247 MYCNP04198 464 aaPredicted RBP18.51■□□□□ 0.55
AC024601.1-201ENST00000427247 APLP2Q06481 763 aa18.45■□□□□ 0.54
AC024601.1-201ENST00000427247 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
AC024601.1-201ENST00000427247 SPINK5Q9NQ38 1064 aaPredicted RBP18.44■□□□□ 0.54
AC024601.1-201ENST00000427247 ZBTB22O15209 634 aa18.39■□□□□ 0.53
AC024601.1-201ENST00000427247 CAPN15O75808 1086 aa18.37■□□□□ 0.53
AC024601.1-201ENST00000427247 ZNF219Q9P2Y4 722 aaPredicted RBP18.24■□□□□ 0.51
AC024601.1-201ENST00000427247 DSG3P32926 999 aa18.23■□□□□ 0.51
AC024601.1-201ENST00000427247 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
AC024601.1-201ENST00000427247 ATXN8OSP0DMR3 200 aa18■□□□□ 0.47
AC024601.1-201ENST00000427247 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
AC024601.1-201ENST00000427247 ABCB7O75027 752 aa17.97■□□□□ 0.47
AC024601.1-201ENST00000427247 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
AC024601.1-201ENST00000427247 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
AC024601.1-201ENST00000427247 POLA2Q14181 598 aa17.83■□□□□ 0.44
AC024601.1-201ENST00000427247 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
AC024601.1-201ENST00000427247 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
AC024601.1-201ENST00000427247 FBLN2P98095 1184 aa17.28■□□□□ 0.36
AC024601.1-201ENST00000427247 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
AC024601.1-201ENST00000427247 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
AC024601.1-201ENST00000427247 AKT1S1Q96B36 256 aa17.1■□□□□ 0.33
AC024601.1-201ENST00000427247 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
AC024601.1-201ENST00000427247 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
AC024601.1-201ENST00000427247 SPDYE2Q495Y8 402 aa17.06■□□□□ 0.32
AC024601.1-201ENST00000427247 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
AC024601.1-201ENST00000427247 SSUH2Q9Y2M2 353 aa16.89■□□□□ 0.29
AC024601.1-201ENST00000427247 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
AC024601.1-201ENST00000427247 CHRDL2Q6WN34 429 aa16.8■□□□□ 0.28
AC024601.1-201ENST00000427247 POTEHQ6S545 545 aa16.74■□□□□ 0.27
AC024601.1-201ENST00000427247 PITPNM1O00562 1244 aa16.71■□□□□ 0.27
AC024601.1-201ENST00000427247 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
AC024601.1-201ENST00000427247 SPDYE1Q8NFV5 336 aaPredicted RBP16.63■□□□□ 0.25
AC024601.1-201ENST00000427247 SPDYE4A6NLX3 237 aa16.62■□□□□ 0.25
AC024601.1-201ENST00000427247 FXR2P51116 673 aaKnown RBP eCLIP16.52■□□□□ 0.24
AC024601.1-201ENST00000427247 PIP4P2Q8N4L2 257 aa16.51■□□□□ 0.23
AC024601.1-201ENST00000427247 CLEC11AQ9Y240 323 aa16.49■□□□□ 0.23
AC024601.1-201ENST00000427247 PROM2Q8N271 834 aa16.39■□□□□ 0.21
AC024601.1-201ENST00000427247 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
AC024601.1-201ENST00000427247 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
AC024601.1-201ENST00000427247 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
AC024601.1-201ENST00000427247 FKBP8Q14318 412 aa16.21■□□□□ 0.19
AC024601.1-201ENST00000427247 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
AC024601.1-201ENST00000427247 NISCHQ9Y2I1 1504 aa16.13■□□□□ 0.17
AC024601.1-201ENST00000427247 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
AC024601.1-201ENST00000427247 HAX1O00165 279 aa16.03■□□□□ 0.16
AC024601.1-201ENST00000427247 FARP1Q9Y4F1 1045 aaPredicted RBP16.01■□□□□ 0.15
AC024601.1-201ENST00000427247 C19orf67A6NJJ6 358 aa15.97■□□□□ 0.15
AC024601.1-201ENST00000427247 SP7Q8TDD2 431 aaPredicted RBP15.91■□□□□ 0.14
AC024601.1-201ENST00000427247 EVX2Q03828 476 aa15.9■□□□□ 0.14
AC024601.1-201ENST00000427247 MNX1P50219 401 aaPredicted RBP15.88■□□□□ 0.13
AC024601.1-201ENST00000427247 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
AC024601.1-201ENST00000427247 NPM1P06748 294 aaKnown RBP eCLIP15.79■□□□□ 0.12
AC024601.1-201ENST00000427247 MIER1Q8N108 512 aa15.78■□□□□ 0.12
AC024601.1-201ENST00000427247 CD44P16070 742 aaKnown RBP15.77■□□□□ 0.12
AC024601.1-201ENST00000427247 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
AC024601.1-201ENST00000427247 PLCD3Q8N3E9 789 aa15.7■□□□□ 0.1
AC024601.1-201ENST00000427247 ZBTB47Q9UFB7 747 aaPredicted RBP15.62■□□□□ 0.09
AC024601.1-201ENST00000427247 ZNF579Q8NAF0 562 aaKnown RBP15.61■□□□□ 0.09
AC024601.1-201ENST00000427247 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
AC024601.1-201ENST00000427247 CLCN6P51797 869 aa15.6■□□□□ 0.09
AC024601.1-201ENST00000427247 GABBR2O75899 941 aa15.59■□□□□ 0.09
AC024601.1-201ENST00000427247 PAK3O75914 559 aaPredicted RBP15.59■□□□□ 0.09
AC024601.1-201ENST00000427247 VASPP50552 380 aaPredicted RBP15.59■□□□□ 0.09
AC024601.1-201ENST00000427247 NUBP1P53384 320 aa15.48■□□□□ 0.07
AC024601.1-201ENST00000427247 RASEFQ8IZ41 740 aa15.47■□□□□ 0.07
AC024601.1-201ENST00000427247 TSPYL2Q9H2G4 693 aaPredicted RBP15.44■□□□□ 0.06
AC024601.1-201ENST00000427247 CCDC61Q9Y6R9 512 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms