RNA–Protein interactions for RNA: ENST00000426541.1

RBSN-202, Transcript of rabenosyn, RAB effector, humanhuman

TSL 3

Gene RBSN, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBSN-202ENST00000426541 AEBP2Q6ZN18 517 aaPredicted RBP26.96■■□□□ 1.91
RBSN-202ENST00000426541 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
RBSN-202ENST00000426541 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
RBSN-202ENST00000426541 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
RBSN-202ENST00000426541 FOXD1Q16676 465 aa21.41■■□□□ 1.02
RBSN-202ENST00000426541 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
RBSN-202ENST00000426541 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
RBSN-202ENST00000426541 ADRA2BP18089 450 aa20.16■□□□□ 0.82
RBSN-202ENST00000426541 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
RBSN-202ENST00000426541 MSH5O43196 834 aa20.02■□□□□ 0.8
RBSN-202ENST00000426541 POTEDQ86YR6 584 aa19.07■□□□□ 0.64
RBSN-202ENST00000426541 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
RBSN-202ENST00000426541 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
RBSN-202ENST00000426541 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
RBSN-202ENST00000426541 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
RBSN-202ENST00000426541 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
RBSN-202ENST00000426541 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
RBSN-202ENST00000426541 HOXD11P31277 338 aaPredicted RBP17.7■□□□□ 0.42
RBSN-202ENST00000426541 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
RBSN-202ENST00000426541 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
RBSN-202ENST00000426541 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
RBSN-202ENST00000426541 KCNA4P22459 653 aa17.24■□□□□ 0.35
RBSN-202ENST00000426541 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
RBSN-202ENST00000426541 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
RBSN-202ENST00000426541 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
RBSN-202ENST00000426541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.31
RBSN-202ENST00000426541 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
RBSN-202ENST00000426541 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
RBSN-202ENST00000426541 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
RBSN-202ENST00000426541 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
RBSN-202ENST00000426541 CAPN15O75808 1086 aa16.27■□□□□ 0.2
RBSN-202ENST00000426541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
RBSN-202ENST00000426541 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
RBSN-202ENST00000426541 APLP2Q06481 763 aa16.23■□□□□ 0.19
RBSN-202ENST00000426541 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
RBSN-202ENST00000426541 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
RBSN-202ENST00000426541 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
RBSN-202ENST00000426541 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
RBSN-202ENST00000426541 DSG3P32926 999 aa16.05■□□□□ 0.16
RBSN-202ENST00000426541 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
RBSN-202ENST00000426541 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
RBSN-202ENST00000426541 ABCB7O75027 752 aa15.87■□□□□ 0.13
RBSN-202ENST00000426541 ZBTB22O15209 634 aa15.81■□□□□ 0.12
RBSN-202ENST00000426541 POLA2Q14181 598 aa15.66■□□□□ 0.1
RBSN-202ENST00000426541 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
RBSN-202ENST00000426541 ATXN8OSP0DMR3 200 aa15.55■□□□□ 0.08
RBSN-202ENST00000426541 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
RBSN-202ENST00000426541 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
RBSN-202ENST00000426541 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
RBSN-202ENST00000426541 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
RBSN-202ENST00000426541 FBLN2P98095 1184 aa15.14■□□□□ 0.01
RBSN-202ENST00000426541 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
RBSN-202ENST00000426541 AKT1S1Q96B36 256 aa15.05■□□□□ -0
RBSN-202ENST00000426541 POTEHQ6S545 545 aa15.02■□□□□ -0
RBSN-202ENST00000426541 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
RBSN-202ENST00000426541 SPDYE2BA6NHP3 402 aa14.91□□□□□ -0.02
RBSN-202ENST00000426541 SPDYE6P0CI01 402 aa14.91□□□□□ -0.02
RBSN-202ENST00000426541 SPDYE2Q495Y8 402 aa14.91□□□□□ -0.02
RBSN-202ENST00000426541 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
RBSN-202ENST00000426541 REM2Q8IYK8 340 aaPredicted RBP14.89□□□□□ -0.03
RBSN-202ENST00000426541 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
RBSN-202ENST00000426541 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
RBSN-202ENST00000426541 SSUH2Q9Y2M2 353 aa14.69□□□□□ -0.06
RBSN-202ENST00000426541 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
RBSN-202ENST00000426541 PIP4P2Q8N4L2 257 aa14.59□□□□□ -0.07
RBSN-202ENST00000426541 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
RBSN-202ENST00000426541 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
RBSN-202ENST00000426541 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
RBSN-202ENST00000426541 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
RBSN-202ENST00000426541 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
RBSN-202ENST00000426541 PRKAR2AP13861 404 aaKnown RBP14.37□□□□□ -0.11
RBSN-202ENST00000426541 HAX1O00165 279 aa14.32□□□□□ -0.12
RBSN-202ENST00000426541 STAG3Q9UJ98 1225 aa14.26□□□□□ -0.13
RBSN-202ENST00000426541 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
RBSN-202ENST00000426541 SP7Q8TDD2 431 aaPredicted RBP14.2□□□□□ -0.14
RBSN-202ENST00000426541 FARP1Q9Y4F1 1045 aaPredicted RBP14.07□□□□□ -0.16
RBSN-202ENST00000426541 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
RBSN-202ENST00000426541 EVX2Q03828 476 aa14.05□□□□□ -0.16
RBSN-202ENST00000426541 PROM2Q8N271 834 aa14.03□□□□□ -0.16
RBSN-202ENST00000426541 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
RBSN-202ENST00000426541 FKBP8Q14318 412 aa13.94□□□□□ -0.18
RBSN-202ENST00000426541 CD44P16070 742 aaKnown RBP13.93□□□□□ -0.18
RBSN-202ENST00000426541 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
RBSN-202ENST00000426541 GABBR2O75899 941 aa13.81□□□□□ -0.2
RBSN-202ENST00000426541 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
RBSN-202ENST00000426541 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
RBSN-202ENST00000426541 MIER1Q8N108 512 aa13.78□□□□□ -0.2
RBSN-202ENST00000426541 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
RBSN-202ENST00000426541 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
RBSN-202ENST00000426541 CLCN6P51797 869 aa13.74□□□□□ -0.21
RBSN-202ENST00000426541 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
RBSN-202ENST00000426541 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
RBSN-202ENST00000426541 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
RBSN-202ENST00000426541 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
RBSN-202ENST00000426541 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
RBSN-202ENST00000426541 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
RBSN-202ENST00000426541 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
RBSN-202ENST00000426541 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
RBSN-202ENST00000426541 RASEFQ8IZ41 740 aa13.46□□□□□ -0.25
RBSN-202ENST00000426541 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms