RNA–Protein interactions for RNA: ENST00000424947.6

SENP6-203, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 2,685 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-203ENST00000424947 AEBP2Q6ZN18 517 aaPredicted RBP14.42□□□□□ -0.1
SENP6-203ENST00000424947 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.12
SENP6-203ENST00000424947 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
SENP6-203ENST00000424947 SENP3Q9H4L4 574 aaPredicted RBP11.94□□□□□ -0.5
SENP6-203ENST00000424947 NISCHQ9Y2I1 1504 aa11.86□□□□□ -0.51
SENP6-203ENST00000424947 PLPPR3Q6T4P5 718 aa11.71□□□□□ -0.54
SENP6-203ENST00000424947 ADRA2BP18089 450 aa11.22□□□□□ -0.61
SENP6-203ENST00000424947 FOXD1Q16676 465 aa11.2□□□□□ -0.62
SENP6-203ENST00000424947 PPP6R1Q9UPN7 881 aa11.18□□□□□ -0.62
SENP6-203ENST00000424947 KCNA4P22459 653 aa10.75□□□□□ -0.69
SENP6-203ENST00000424947 PIAS4Q8N2W9 510 aaPredicted RBP10.63□□□□□ -0.71
SENP6-203ENST00000424947 EHMT2Q96KQ7 1210 aa10.51□□□□□ -0.73
SENP6-203ENST00000424947 PPP4R3CPQ6ZMV5 832 aa10.43□□□□□ -0.74
SENP6-203ENST00000424947 CCDC180Q9P1Z9 1646 aa10.25□□□□□ -0.77
SENP6-203ENST00000424947 SLC4A1APQ9BWU0 796 aaKnown RBP10.19□□□□□ -0.78
SENP6-203ENST00000424947 NPM3O75607 178 aaKnown RBP10.17□□□□□ -0.78
SENP6-203ENST00000424947 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
SENP6-203ENST00000424947 NCBP3Q53F19 620 aaKnown RBP10.1□□□□□ -0.79
SENP6-203ENST00000424947 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
SENP6-203ENST00000424947 MSH5O43196 834 aa10.03□□□□□ -0.8
SENP6-203ENST00000424947 POTEDQ86YR6 584 aa10□□□□□ -0.81
SENP6-203ENST00000424947 CNKSR2Q8WXI2 1034 aa9.97□□□□□ -0.81
SENP6-203ENST00000424947 ZCCHC6Q5VYS8 1495 aaKnown RBP9.97□□□□□ -0.81
SENP6-203ENST00000424947 ZBTB22O15209 634 aa9.96□□□□□ -0.82
SENP6-203ENST00000424947 SCAF1Q9H7N4 1312 aaKnown RBP9.94□□□□□ -0.82
SENP6-203ENST00000424947 DCAF1Q9Y4B6 1507 aa9.81□□□□□ -0.84
SENP6-203ENST00000424947 SHROOM4Q9ULL8 1493 aa9.74□□□□□ -0.85
SENP6-203ENST00000424947 DCAF8L2P0C7V8 631 aa9.74□□□□□ -0.85
SENP6-203ENST00000424947 RNF216Q9NWF9 866 aaPredicted RBP9.68□□□□□ -0.86
SENP6-203ENST00000424947 MYO15BQ96JP2 1530 aa9.64□□□□□ -0.87
SENP6-203ENST00000424947 FOXD4L1Q9NU39 408 aa9.63□□□□□ -0.87
SENP6-203ENST00000424947 DMRT2Q9Y5R5 561 aa9.62□□□□□ -0.87
SENP6-203ENST00000424947 DNAJC5BQ9UF47 199 aa9.59□□□□□ -0.88
SENP6-203ENST00000424947 ABCC9O60706 1549 aa9.57□□□□□ -0.88
SENP6-203ENST00000424947 HOXD11P31277 338 aaPredicted RBP9.56□□□□□ -0.88
SENP6-203ENST00000424947 SLC4A2P04920 1241 aa9.55□□□□□ -0.88
SENP6-203ENST00000424947 NACADO15069 1562 aa9.53□□□□□ -0.88
SENP6-203ENST00000424947 SUPT5HO00267 1087 aaKnown RBP9.46□□□□□ -0.9
SENP6-203ENST00000424947 SCRIBQ14160 1630 aa9.44□□□□□ -0.9
SENP6-203ENST00000424947 RB1CC1Q8TDY2 1594 aa9.4□□□□□ -0.9
SENP6-203ENST00000424947 DCAF8L1A6NGE4 600 aa9.33□□□□□ -0.92
SENP6-203ENST00000424947 MYCNP04198 464 aaPredicted RBP9.27□□□□□ -0.93
SENP6-203ENST00000424947 RSF1Q96T23 1441 aaPredicted RBP9.26□□□□□ -0.93
SENP6-203ENST00000424947 UNC13AQ9UPW8 1703 aa9.25□□□□□ -0.93
SENP6-203ENST00000424947 ATF5Q9Y2D1 282 aaPredicted RBP9.22□□□□□ -0.93
SENP6-203ENST00000424947 CECR2Q9BXF3 1484 aa9.21□□□□□ -0.93
SENP6-203ENST00000424947 MROH2BQ7Z745 1585 aa9.17□□□□□ -0.94
SENP6-203ENST00000424947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.16□□□□□ -0.946e-7■□□□□ 10.4
SENP6-203ENST00000424947 BICRAQ9NZM4 1560 aa9.15□□□□□ -0.94
SENP6-203ENST00000424947 FKBP8Q14318 412 aa9.13□□□□□ -0.95
SENP6-203ENST00000424947 U3KPZ7 1027 aaPredicted RBP9.12□□□□□ -0.95
SENP6-203ENST00000424947 BAZ1AQ9NRL2 1556 aaPredicted RBP9.12□□□□□ -0.95
SENP6-203ENST00000424947 ATXN8OSP0DMR3 200 aa9.12□□□□□ -0.95
SENP6-203ENST00000424947 WIZO95785 1651 aa9.1□□□□□ -0.95
SENP6-203ENST00000424947 PABPN1Q86U42 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
SENP6-203ENST00000424947 SMARCA4P51532 1647 aa9.07□□□□□ -0.96
SENP6-203ENST00000424947 RTN4Q9NQC3 1192 aaKnown RBP9.06□□□□□ -0.96
SENP6-203ENST00000424947 TOP2AP11388 1531 aaKnown RBP8.99□□□□□ -0.97
SENP6-203ENST00000424947 PEG3Q9GZU2 1588 aa8.97□□□□□ -0.97
SENP6-203ENST00000424947 SAMD1Q6SPF0 538 aaPredicted RBP8.94□□□□□ -0.98
SENP6-203ENST00000424947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.93□□□□□ -0.98
SENP6-203ENST00000424947 HNRNPUL2Q1KMD3 747 aaKnown RBP8.93□□□□□ -0.98
SENP6-203ENST00000424947 CCDC88BA6NC98 1476 aa8.93□□□□□ -0.98
SENP6-203ENST00000424947 SMARCA2P51531 1590 aa8.92□□□□□ -0.98
SENP6-203ENST00000424947 ATAD2BQ9ULI0 1458 aa8.9□□□□□ -0.98
SENP6-203ENST00000424947 EIF4G1Q04637 1599 aaKnown RBP8.9□□□□□ -0.99
SENP6-203ENST00000424947 TRIM41Q8WV44 630 aa8.89□□□□□ -0.99
SENP6-203ENST00000424947 ZNF219Q9P2Y4 722 aaPredicted RBP8.86□□□□□ -0.99
SENP6-203ENST00000424947 SPINK5Q9NQ38 1064 aaPredicted RBP8.84□□□□□ -0.99
SENP6-203ENST00000424947 BAZ1BQ9UIG0 1483 aaKnown RBP8.83□□□□□ -1
SENP6-203ENST00000424947 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
SENP6-203ENST00000424947 AMER1Q5JTC6 1135 aaPredicted RBP8.82□□□□□ -1
SENP6-203ENST00000424947 NCAPD3P42695 1498 aa8.81□□□□□ -1
SENP6-203ENST00000424947 MKRN4PQ13434 485 aaPredicted RBP8.79□□□□□ -1
SENP6-203ENST00000424947 HMGXB3Q12766 1538 aa8.78□□□□□ -1
SENP6-203ENST00000424947 TRHP20396 242 aaPredicted RBP8.77□□□□□ -1
SENP6-203ENST00000424947 ABCC8Q09428 1581 aa8.76□□□□□ -1.01
SENP6-203ENST00000424947 APLP2Q06481 763 aa8.75□□□□□ -1.01
SENP6-203ENST00000424947 FAM9AQ8IZU1 332 aaPredicted RBP8.72□□□□□ -1.01
SENP6-203ENST00000424947 POLA2Q14181 598 aa8.7□□□□□ -1.02
SENP6-203ENST00000424947 RNF39Q9H2S5 420 aa8.7□□□□□ -1.02
SENP6-203ENST00000424947 SLC24A1O60721 1099 aa8.69□□□□□ -1.02
SENP6-203ENST00000424947 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
SENP6-203ENST00000424947 CC2D2AQ9P2K1 1620 aa8.68□□□□□ -1.02
SENP6-203ENST00000424947 SPDYE4A6NLX3 237 aa8.68□□□□□ -1.02
SENP6-203ENST00000424947 CAPN15O75808 1086 aa8.68□□□□□ -1.02
SENP6-203ENST00000424947 CFTRP13569 1480 aa8.65□□□□□ -1.03
SENP6-203ENST00000424947 SYNJ1O43426 1573 aa8.65□□□□□ -1.03
SENP6-203ENST00000424947 ABCB7O75027 752 aa8.65□□□□□ -1.03
SENP6-203ENST00000424947 SOGA1O94964 1423 aa8.64□□□□□ -1.03
SENP6-203ENST00000424947 EEA1Q15075 1411 aa8.63□□□□□ -1.03
SENP6-203ENST00000424947 RUSC2Q8N2Y8 1516 aa8.62□□□□□ -1.03
SENP6-203ENST00000424947 TOP2BQ02880 1626 aa8.61□□□□□ -1.03
SENP6-203ENST00000424947 BIVM-ERCC5R4GMW8 1640 aa8.59□□□□□ -1.03
SENP6-203ENST00000424947 PRDM2Q13029 1718 aa8.59□□□□□ -1.03
SENP6-203ENST00000424947 CADPSQ9ULU8 1353 aa8.59□□□□□ -1.03
SENP6-203ENST00000424947 CUX1P39880 1505 aa8.56□□□□□ -1.04
SENP6-203ENST00000424947 C1QBPQ07021 282 aaKnown RBP8.55□□□□□ -1.04
SENP6-203ENST00000424947 TNIKQ9UKE5 1360 aa8.54□□□□□ -1.04
SENP6-203ENST00000424947 FBLN2P98095 1184 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms