RNA–Protein interactions for RNA: ENST00000424747.1

SLC52A1-202, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,412 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-202ENST00000424747 NISCHQ9Y2I1 1504 aa35.67■■■■□ 3.3
SLC52A1-202ENST00000424747 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
SLC52A1-202ENST00000424747 ZCCHC6Q5VYS8 1495 aaKnown RBP30.08■■■□□ 2.41
SLC52A1-202ENST00000424747 SHROOM4Q9ULL8 1493 aa29.98■■■□□ 2.39
SLC52A1-202ENST00000424747 DCAF8L2P0C7V8 631 aa29.61■■■□□ 2.33
SLC52A1-202ENST00000424747 DCAF1Q9Y4B6 1507 aa29.33■■■□□ 2.29
SLC52A1-202ENST00000424747 SUPT5HO00267 1087 aaKnown RBP29.21■■■□□ 2.27
SLC52A1-202ENST00000424747 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
SLC52A1-202ENST00000424747 ABCC9O60706 1549 aa28.6■■■□□ 2.17
SLC52A1-202ENST00000424747 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
SLC52A1-202ENST00000424747 CHIC1Q5VXU3 224 aa28.47■■■□□ 2.15
SLC52A1-202ENST00000424747 NACADO15069 1562 aa28.38■■■□□ 2.13
SLC52A1-202ENST00000424747 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
SLC52A1-202ENST00000424747 RB1CC1Q8TDY2 1594 aa28■■■□□ 2.07
SLC52A1-202ENST00000424747 HRCP23327 699 aa27.81■■■□□ 2.04
SLC52A1-202ENST00000424747 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
SLC52A1-202ENST00000424747 MROH2BQ7Z745 1585 aa27.68■■■□□ 2.02
SLC52A1-202ENST00000424747 PCGF6Q9BYE7 350 aa27.63■■■□□ 2.01
SLC52A1-202ENST00000424747 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
SLC52A1-202ENST00000424747 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
SLC52A1-202ENST00000424747 WIZO95785 1651 aa27.51■■□□□ 1.99
SLC52A1-202ENST00000424747 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
SLC52A1-202ENST00000424747 TRIM41Q8WV44 630 aa27.3■■□□□ 1.96
SLC52A1-202ENST00000424747 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
SLC52A1-202ENST00000424747 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
SLC52A1-202ENST00000424747 BICRAQ9NZM4 1560 aa27.21■■□□□ 1.95
SLC52A1-202ENST00000424747 TRIM26Q12899 539 aaPredicted RBP27.17■■□□□ 1.94
SLC52A1-202ENST00000424747 PPARGC1BQ86YN6 1023 aaKnown RBP27.11■■□□□ 1.93
SLC52A1-202ENST00000424747 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
SLC52A1-202ENST00000424747 FAM9AQ8IZU1 332 aaPredicted RBP26.99■■□□□ 1.91
SLC52A1-202ENST00000424747 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
SLC52A1-202ENST00000424747 EIF4G1Q04637 1599 aaKnown RBP26.95■■□□□ 1.91
SLC52A1-202ENST00000424747 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
SLC52A1-202ENST00000424747 PEG3Q9GZU2 1588 aa26.78■■□□□ 1.88
SLC52A1-202ENST00000424747 EHMT2Q96KQ7 1210 aa26.73■■□□□ 1.87
SLC52A1-202ENST00000424747 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
SLC52A1-202ENST00000424747 ZEB1P37275 1124 aaPredicted RBP26.66■■□□□ 1.86
SLC52A1-202ENST00000424747 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
SLC52A1-202ENST00000424747 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
SLC52A1-202ENST00000424747 SOGA1O94964 1423 aa26.38■■□□□ 1.81
SLC52A1-202ENST00000424747 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
SLC52A1-202ENST00000424747 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
SLC52A1-202ENST00000424747 EEA1Q15075 1411 aa26.25■■□□□ 1.79
SLC52A1-202ENST00000424747 NCAPD3P42695 1498 aa26.24■■□□□ 1.79
SLC52A1-202ENST00000424747 SYNJ1O43426 1573 aa26.23■■□□□ 1.79
SLC52A1-202ENST00000424747 CSRNP3Q8WYN3 585 aa26.23■■□□□ 1.79
SLC52A1-202ENST00000424747 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
SLC52A1-202ENST00000424747 CEP162Q5TB80 1403 aa26.11■■□□□ 1.77
SLC52A1-202ENST00000424747 TNIKQ9UKE5 1360 aa26.09■■□□□ 1.77
SLC52A1-202ENST00000424747 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
SLC52A1-202ENST00000424747 GOLGA3Q08378 1498 aa26.02■■□□□ 1.76
SLC52A1-202ENST00000424747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.98■■□□□ 1.75
SLC52A1-202ENST00000424747 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
SLC52A1-202ENST00000424747 CCER1Q8TC90 406 aaPredicted RBP25.94■■□□□ 1.74
SLC52A1-202ENST00000424747 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
SLC52A1-202ENST00000424747 BIVM-ERCC5R4GMW8 1640 aa25.91■■□□□ 1.74
SLC52A1-202ENST00000424747 KIF21BO75037 1637 aa25.89■■□□□ 1.74
SLC52A1-202ENST00000424747 CFTRP13569 1480 aa25.89■■□□□ 1.74
SLC52A1-202ENST00000424747 CUX1P39880 1505 aa25.8■■□□□ 1.72
SLC52A1-202ENST00000424747 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
SLC52A1-202ENST00000424747 TTBK1Q5TCY1 1321 aaPredicted RBP25.78■■□□□ 1.72
SLC52A1-202ENST00000424747 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
SLC52A1-202ENST00000424747 PRDM2Q13029 1718 aa25.7■■□□□ 1.71
SLC52A1-202ENST00000424747 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
SLC52A1-202ENST00000424747 CLIP1P30622 1438 aa25.69■■□□□ 1.7
SLC52A1-202ENST00000424747 SCAF1Q9H7N4 1312 aaKnown RBP25.65■■□□□ 1.7
SLC52A1-202ENST00000424747 KIF27Q86VH2 1401 aa25.6■■□□□ 1.69
SLC52A1-202ENST00000424747 RANGAP1P46060 587 aaPredicted RBP25.59■■□□□ 1.69
SLC52A1-202ENST00000424747 PRXQ9BXM0 1461 aa25.59■■□□□ 1.69
SLC52A1-202ENST00000424747 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
SLC52A1-202ENST00000424747 VPS8Q8N3P4 1428 aa25.53■■□□□ 1.68
SLC52A1-202ENST00000424747 DIEXFQ68CQ4 756 aaKnown RBP25.52■■□□□ 1.68
SLC52A1-202ENST00000424747 FANCD2Q9BXW9 1451 aa25.43■■□□□ 1.66
SLC52A1-202ENST00000424747 CUX2O14529 1486 aa25.42■■□□□ 1.66
SLC52A1-202ENST00000424747 FGD5Q6ZNL6 1462 aa25.41■■□□□ 1.66
SLC52A1-202ENST00000424747 APLP2Q06481 763 aa25.41■■□□□ 1.66
SLC52A1-202ENST00000424747 ACIN1Q9UKV3 1341 aaKnown RBP25.41■■□□□ 1.66
SLC52A1-202ENST00000424747 NESP48681 1621 aa25.35■■□□□ 1.65
SLC52A1-202ENST00000424747 IGF1RP08069 1367 aa25.35■■□□□ 1.65
SLC52A1-202ENST00000424747 ZNF316A6NFI3 1004 aaPredicted RBP25.33■■□□□ 1.65
SLC52A1-202ENST00000424747 NEUROD1Q13562 356 aa25.33■■□□□ 1.65
SLC52A1-202ENST00000424747 HNRNPUL2Q1KMD3 747 aaKnown RBP25.33■■□□□ 1.64
SLC52A1-202ENST00000424747 PELP1Q8IZL8 1130 aaKnown RBP25.32■■□□□ 1.64
SLC52A1-202ENST00000424747 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
SLC52A1-202ENST00000424747 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
SLC52A1-202ENST00000424747 CENPBP07199 599 aaPredicted RBP25.25■■□□□ 1.63
SLC52A1-202ENST00000424747 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
SLC52A1-202ENST00000424747 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
SLC52A1-202ENST00000424747 LAMC3Q9Y6N6 1575 aa25.2■■□□□ 1.62
SLC52A1-202ENST00000424747 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
SLC52A1-202ENST00000424747 ARHGAP35Q9NRY4 1499 aa25.18■■□□□ 1.62
SLC52A1-202ENST00000424747 POLA1P09884 1462 aaPredicted RBP25.17■■□□□ 1.62
SLC52A1-202ENST00000424747 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
SLC52A1-202ENST00000424747 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
SLC52A1-202ENST00000424747 KANK4Q5T7N3 995 aaPredicted RBP25.1■■□□□ 1.61
SLC52A1-202ENST00000424747 URB2Q14146 1524 aaKnown RBP25.08■■□□□ 1.61
SLC52A1-202ENST00000424747 GTF3C3Q9Y5Q9 886 aa25.07■■□□□ 1.6
SLC52A1-202ENST00000424747 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
SLC52A1-202ENST00000424747 CLSPNQ9HAW4 1339 aa25.01■■□□□ 1.59
SLC52A1-202ENST00000424747 RRBP1Q9P2E9 1410 aaKnown RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms