RNA–Protein interactions for RNA: ENST00000424493.1

AC024560.1-201, humanhuman

TSL 3 BASIC

Gene AC024560.1, Length 1,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC024560.1-201ENST00000424493 NISCHQ9Y2I1 1504 aa29.09■■■□□ 2.25
AC024560.1-201ENST00000424493 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
AC024560.1-201ENST00000424493 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
AC024560.1-201ENST00000424493 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
AC024560.1-201ENST00000424493 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
AC024560.1-201ENST00000424493 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
AC024560.1-201ENST00000424493 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
AC024560.1-201ENST00000424493 ABCC9O60706 1549 aa23.39■■□□□ 1.33
AC024560.1-201ENST00000424493 NACADO15069 1562 aa23.35■■□□□ 1.33
AC024560.1-201ENST00000424493 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
AC024560.1-201ENST00000424493 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
AC024560.1-201ENST00000424493 RB1CC1Q8TDY2 1594 aa23.04■■□□□ 1.28
AC024560.1-201ENST00000424493 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
AC024560.1-201ENST00000424493 UNC13AQ9UPW8 1703 aa22.55■■□□□ 1.2
AC024560.1-201ENST00000424493 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
AC024560.1-201ENST00000424493 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
AC024560.1-201ENST00000424493 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
AC024560.1-201ENST00000424493 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
AC024560.1-201ENST00000424493 BICRAQ9NZM4 1560 aa22.32■■□□□ 1.16
AC024560.1-201ENST00000424493 WIZO95785 1651 aa22.31■■□□□ 1.16
AC024560.1-201ENST00000424493 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
AC024560.1-201ENST00000424493 TOP2AP11388 1531 aaKnown RBP22.14■■□□□ 1.13
AC024560.1-201ENST00000424493 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.13
AC024560.1-201ENST00000424493 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
AC024560.1-201ENST00000424493 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
AC024560.1-201ENST00000424493 SMARCA2P51531 1590 aa21.92■■□□□ 1.1
AC024560.1-201ENST00000424493 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
AC024560.1-201ENST00000424493 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
AC024560.1-201ENST00000424493 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
AC024560.1-201ENST00000424493 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
AC024560.1-201ENST00000424493 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
AC024560.1-201ENST00000424493 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
AC024560.1-201ENST00000424493 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
AC024560.1-201ENST00000424493 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
AC024560.1-201ENST00000424493 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
AC024560.1-201ENST00000424493 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
AC024560.1-201ENST00000424493 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.01
AC024560.1-201ENST00000424493 EEA1Q15075 1411 aa21.35■■□□□ 1.01
AC024560.1-201ENST00000424493 SYNJ1O43426 1573 aa21.27■■□□□ 1
AC024560.1-201ENST00000424493 SOGA1O94964 1423 aa21.24■□□□□ 0.99
AC024560.1-201ENST00000424493 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
AC024560.1-201ENST00000424493 CFTRP13569 1480 aa21.18■□□□□ 0.98
AC024560.1-201ENST00000424493 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
AC024560.1-201ENST00000424493 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
AC024560.1-201ENST00000424493 PCGF6Q9BYE7 350 aa21.14■□□□□ 0.98
AC024560.1-201ENST00000424493 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
AC024560.1-201ENST00000424493 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
AC024560.1-201ENST00000424493 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
AC024560.1-201ENST00000424493 PRDM2Q13029 1718 aa21.1■□□□□ 0.97
AC024560.1-201ENST00000424493 TRIM26Q12899 539 aaPredicted RBP21.08■□□□□ 0.97
AC024560.1-201ENST00000424493 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
AC024560.1-201ENST00000424493 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
AC024560.1-201ENST00000424493 KIF21BO75037 1637 aa21.03■□□□□ 0.96
AC024560.1-201ENST00000424493 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
AC024560.1-201ENST00000424493 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
AC024560.1-201ENST00000424493 CUX1P39880 1505 aa21■□□□□ 0.95
AC024560.1-201ENST00000424493 CEP162Q5TB80 1403 aa20.98■□□□□ 0.95
AC024560.1-201ENST00000424493 HRCP23327 699 aa20.94■□□□□ 0.94
AC024560.1-201ENST00000424493 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
AC024560.1-201ENST00000424493 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
AC024560.1-201ENST00000424493 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
AC024560.1-201ENST00000424493 RAPGEF2Q9Y4G8 1499 aa20.79■□□□□ 0.92
AC024560.1-201ENST00000424493 PRXQ9BXM0 1461 aa20.79■□□□□ 0.92
AC024560.1-201ENST00000424493 FANCD2Q9BXW9 1451 aa20.79■□□□□ 0.92
AC024560.1-201ENST00000424493 LAMC3Q9Y6N6 1575 aa20.75■□□□□ 0.91
AC024560.1-201ENST00000424493 CLIP1P30622 1438 aa20.72■□□□□ 0.91
AC024560.1-201ENST00000424493 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.91
AC024560.1-201ENST00000424493 DNMBPQ6XZF7 1577 aa20.7■□□□□ 0.9
AC024560.1-201ENST00000424493 NESP48681 1621 aa20.66■□□□□ 0.9
AC024560.1-201ENST00000424493 CUX2O14529 1486 aa20.65■□□□□ 0.9
AC024560.1-201ENST00000424493 TOPBP1Q92547 1522 aa20.62■□□□□ 0.89
AC024560.1-201ENST00000424493 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
AC024560.1-201ENST00000424493 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
AC024560.1-201ENST00000424493 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
AC024560.1-201ENST00000424493 IGF1RP08069 1367 aa20.56■□□□□ 0.88
AC024560.1-201ENST00000424493 ABCA10Q8WWZ4 1543 aa20.55■□□□□ 0.88
AC024560.1-201ENST00000424493 POLA1P09884 1462 aaPredicted RBP20.54■□□□□ 0.88
AC024560.1-201ENST00000424493 ZEB1P37275 1124 aaPredicted RBP20.5■□□□□ 0.87
AC024560.1-201ENST00000424493 URB2Q14146 1524 aaKnown RBP20.5■□□□□ 0.87
AC024560.1-201ENST00000424493 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
AC024560.1-201ENST00000424493 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
AC024560.1-201ENST00000424493 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
AC024560.1-201ENST00000424493 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
AC024560.1-201ENST00000424493 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
AC024560.1-201ENST00000424493 CUL7Q14999 1698 aa20.4■□□□□ 0.86
AC024560.1-201ENST00000424493 APLP2Q06481 763 aa20.39■□□□□ 0.85
AC024560.1-201ENST00000424493 RANGAP1P46060 587 aaPredicted RBP20.37■□□□□ 0.85
AC024560.1-201ENST00000424493 ARHGAP35Q9NRY4 1499 aa20.37■□□□□ 0.85
AC024560.1-201ENST00000424493 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
AC024560.1-201ENST00000424493 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
AC024560.1-201ENST00000424493 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
AC024560.1-201ENST00000424493 GAPVD1Q14C86 1478 aa20.26■□□□□ 0.83
AC024560.1-201ENST00000424493 TARBP1Q13395 1621 aaKnown RBP20.26■□□□□ 0.83
AC024560.1-201ENST00000424493 CTTNBP2Q8WZ74 1663 aa20.22■□□□□ 0.83
AC024560.1-201ENST00000424493 EFCAB5A4FU69 1503 aa20.21■□□□□ 0.83
AC024560.1-201ENST00000424493 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
AC024560.1-201ENST00000424493 MAP3K1Q13233 1512 aa20.19■□□□□ 0.82
AC024560.1-201ENST00000424493 FHAD1B1AJZ9 1412 aa20.17■□□□□ 0.82
AC024560.1-201ENST00000424493 WDR62O43379 1518 aa20.16■□□□□ 0.82
AC024560.1-201ENST00000424493 CCER1Q8TC90 406 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms