RNA–Protein interactions for RNA: ENST00000424441.1

BRWD1-206, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 1 (best)

Gene BRWD1, Length 1,356 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-206ENST00000424441 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
BRWD1-206ENST00000424441 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
BRWD1-206ENST00000424441 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
BRWD1-206ENST00000424441 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
BRWD1-206ENST00000424441 FOXD1Q16676 465 aa17.7■□□□□ 0.42
BRWD1-206ENST00000424441 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
BRWD1-206ENST00000424441 MSH5O43196 834 aa16.85■□□□□ 0.29
BRWD1-206ENST00000424441 PIAS4Q8N2W9 510 aaPredicted RBP16.42■□□□□ 0.22
BRWD1-206ENST00000424441 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
BRWD1-206ENST00000424441 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
BRWD1-206ENST00000424441 ADRA2BP18089 450 aa16■□□□□ 0.15
BRWD1-206ENST00000424441 DMRT2Q9Y5R5 561 aa14.93□□□□□ -0.02
BRWD1-206ENST00000424441 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
BRWD1-206ENST00000424441 CACNB1Q02641 598 aaPredicted RBP14.81□□□□□ -0.04
BRWD1-206ENST00000424441 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
BRWD1-206ENST00000424441 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
BRWD1-206ENST00000424441 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
BRWD1-206ENST00000424441 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
BRWD1-206ENST00000424441 C1QBPQ07021 282 aaKnown RBP14.08□□□□□ -0.16
BRWD1-206ENST00000424441 PPP4R3CPQ6ZMV5 832 aa13.96□□□□□ -0.18
BRWD1-206ENST00000424441 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
BRWD1-206ENST00000424441 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
BRWD1-206ENST00000424441 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
BRWD1-206ENST00000424441 POTEHQ6S545 545 aa13.55□□□□□ -0.24
BRWD1-206ENST00000424441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.254e-7■■■■□ 22.7
BRWD1-206ENST00000424441 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
BRWD1-206ENST00000424441 DSG3P32926 999 aa13.18□□□□□ -0.3
BRWD1-206ENST00000424441 CAPN15O75808 1086 aa13.14□□□□□ -0.31
BRWD1-206ENST00000424441 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
BRWD1-206ENST00000424441 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
BRWD1-206ENST00000424441 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
BRWD1-206ENST00000424441 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
BRWD1-206ENST00000424441 APLP2Q06481 763 aa12.76□□□□□ -0.37
BRWD1-206ENST00000424441 ABCB7O75027 752 aa12.75□□□□□ -0.37
BRWD1-206ENST00000424441 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
BRWD1-206ENST00000424441 KCNA4P22459 653 aa12.64□□□□□ -0.39
BRWD1-206ENST00000424441 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
BRWD1-206ENST00000424441 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
BRWD1-206ENST00000424441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
BRWD1-206ENST00000424441 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
BRWD1-206ENST00000424441 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
BRWD1-206ENST00000424441 SAMD1Q6SPF0 538 aaPredicted RBP12.47□□□□□ -0.41
BRWD1-206ENST00000424441 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
BRWD1-206ENST00000424441 POLA2Q14181 598 aa12.3□□□□□ -0.44
BRWD1-206ENST00000424441 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
BRWD1-206ENST00000424441 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
BRWD1-206ENST00000424441 HAX1O00165 279 aa12.1□□□□□ -0.47
BRWD1-206ENST00000424441 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
BRWD1-206ENST00000424441 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
BRWD1-206ENST00000424441 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
BRWD1-206ENST00000424441 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
BRWD1-206ENST00000424441 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.497e-7■■■□□ 16.9
BRWD1-206ENST00000424441 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
BRWD1-206ENST00000424441 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
BRWD1-206ENST00000424441 EVX2Q03828 476 aa11.84□□□□□ -0.51
BRWD1-206ENST00000424441 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
BRWD1-206ENST00000424441 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
BRWD1-206ENST00000424441 ZBTB22O15209 634 aa11.68□□□□□ -0.54
BRWD1-206ENST00000424441 LHX8Q68G74 356 aa11.65□□□□□ -0.55
BRWD1-206ENST00000424441 CSRNP3Q8WYN3 585 aa11.65□□□□□ -0.55
BRWD1-206ENST00000424441 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.55
BRWD1-206ENST00000424441 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
BRWD1-206ENST00000424441 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
BRWD1-206ENST00000424441 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
BRWD1-206ENST00000424441 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
BRWD1-206ENST00000424441 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
BRWD1-206ENST00000424441 GABBR2O75899 941 aa11.57□□□□□ -0.56
BRWD1-206ENST00000424441 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
BRWD1-206ENST00000424441 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
BRWD1-206ENST00000424441 FBLN2P98095 1184 aa11.48□□□□□ -0.57
BRWD1-206ENST00000424441 PLSCR2Q9NRY7 297 aa11.41□□□□□ -0.58
BRWD1-206ENST00000424441 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
BRWD1-206ENST00000424441 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
BRWD1-206ENST00000424441 CHADLQ6NUI6 762 aa11.35□□□□□ -0.59
BRWD1-206ENST00000424441 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
BRWD1-206ENST00000424441 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
BRWD1-206ENST00000424441 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
BRWD1-206ENST00000424441 MKRN4PQ13434 485 aaPredicted RBP11.26□□□□□ -0.61
BRWD1-206ENST00000424441 CLCN6P51797 869 aa11.25□□□□□ -0.61
BRWD1-206ENST00000424441 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
BRWD1-206ENST00000424441 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
BRWD1-206ENST00000424441 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
BRWD1-206ENST00000424441 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
BRWD1-206ENST00000424441 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
BRWD1-206ENST00000424441 OTUD5Q96G74 571 aa11.02□□□□□ -0.65
BRWD1-206ENST00000424441 POTEMA6NI47 508 aa10.99□□□□□ -0.65
BRWD1-206ENST00000424441 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
BRWD1-206ENST00000424441 POTEGQ6S5H5 508 aa10.94□□□□□ -0.66
BRWD1-206ENST00000424441 POTEB2H3BUK9 544 aa10.91□□□□□ -0.66
BRWD1-206ENST00000424441 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
BRWD1-206ENST00000424441 PCDH10Q9P2E7 1040 aa10.9□□□□□ -0.67
BRWD1-206ENST00000424441 CREBZFQ9NS37 354 aa10.82□□□□□ -0.68
BRWD1-206ENST00000424441 PAK3O75914 559 aaPredicted RBP10.8□□□□□ -0.68
BRWD1-206ENST00000424441 PELP1Q8IZL8 1130 aaKnown RBP10.76□□□□□ -0.69
BRWD1-206ENST00000424441 PHF12Q96QT6 1004 aa10.76□□□□□ -0.69
BRWD1-206ENST00000424441 STAG3Q9UJ98 1225 aa10.76□□□□□ -0.69
BRWD1-206ENST00000424441 MAMSTRQ6ZN01 415 aa10.71□□□□□ -0.69
BRWD1-206ENST00000424441 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
BRWD1-206ENST00000424441 C7P10643 843 aa10.68□□□□□ -0.7
BRWD1-206ENST00000424441 SLC39A7Q92504 469 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms