RNA–Protein interactions for RNA: ENST00000423971.2

ACTBP13-201, Transcript of actin, beta pseudogene 13, humanhuman

BASIC

Gene ACTBP13, Length 3,959 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP13-201ENST00000423971 NISCHQ9Y2I1 1504 aa17.41■□□□□ 0.38
ACTBP13-201ENST00000423971 DCAF8L2P0C7V8 631 aa15.92■□□□□ 0.14
ACTBP13-201ENST00000423971 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
ACTBP13-201ENST00000423971 SUPT5HO00267 1087 aaKnown RBP15.28■□□□□ 0.04
ACTBP13-201ENST00000423971 ABCC9O60706 1549 aa14.73□□□□□ -0.05
ACTBP13-201ENST00000423971 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
ACTBP13-201ENST00000423971 ZCCHC6Q5VYS8 1495 aaKnown RBP14.54□□□□□ -0.08
ACTBP13-201ENST00000423971 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
ACTBP13-201ENST00000423971 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.11
ACTBP13-201ENST00000423971 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
ACTBP13-201ENST00000423971 SCRIBQ14160 1630 aa14.27□□□□□ -0.13
ACTBP13-201ENST00000423971 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
ACTBP13-201ENST00000423971 CHIC1Q5VXU3 224 aa14.17□□□□□ -0.14
ACTBP13-201ENST00000423971 LOC105371045A0A1W2PR82 267 aa14.11□□□□□ -0.15
ACTBP13-201ENST00000423971 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
ACTBP13-201ENST00000423971 MYT1Q01538 1121 aa13.93□□□□□ -0.18
ACTBP13-201ENST00000423971 TTBK1Q5TCY1 1321 aaPredicted RBP13.92□□□□□ -0.18
ACTBP13-201ENST00000423971 CECR2Q9BXF3 1484 aa13.91□□□□□ -0.18
ACTBP13-201ENST00000423971 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
ACTBP13-201ENST00000423971 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
ACTBP13-201ENST00000423971 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
ACTBP13-201ENST00000423971 PCGF6Q9BYE7 350 aa13.84□□□□□ -0.19
ACTBP13-201ENST00000423971 DCAF1Q9Y4B6 1507 aa13.83□□□□□ -0.2
ACTBP13-201ENST00000423971 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
ACTBP13-201ENST00000423971 NACADO15069 1562 aa13.74□□□□□ -0.21
ACTBP13-201ENST00000423971 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
ACTBP13-201ENST00000423971 MROH2BQ7Z745 1585 aa13.69□□□□□ -0.22
ACTBP13-201ENST00000423971 WIZO95785 1651 aa13.58□□□□□ -0.24
ACTBP13-201ENST00000423971 UBTFP17480 764 aaKnown RBP13.56□□□□□ -0.24
ACTBP13-201ENST00000423971 HRCP23327 699 aa13.54□□□□□ -0.24
ACTBP13-201ENST00000423971 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
ACTBP13-201ENST00000423971 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
ACTBP13-201ENST00000423971 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
ACTBP13-201ENST00000423971 ATP1B4Q9UN42 357 aaPredicted RBP13.29□□□□□ -0.28
ACTBP13-201ENST00000423971 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
ACTBP13-201ENST00000423971 SMARCA4P51532 1647 aa13.27□□□□□ -0.28
ACTBP13-201ENST00000423971 BICRAQ9NZM4 1560 aa13.26□□□□□ -0.29
ACTBP13-201ENST00000423971 BAZ1BQ9UIG0 1483 aaKnown RBP13.25□□□□□ -0.29
ACTBP13-201ENST00000423971 SOGA1O94964 1423 aa13.24□□□□□ -0.29
ACTBP13-201ENST00000423971 TRIM26Q12899 539 aaPredicted RBP13.24□□□□□ -0.29
ACTBP13-201ENST00000423971 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
ACTBP13-201ENST00000423971 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
ACTBP13-201ENST00000423971 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
ACTBP13-201ENST00000423971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
ACTBP13-201ENST00000423971 APLP2Q06481 763 aa13.17□□□□□ -0.3
ACTBP13-201ENST00000423971 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
ACTBP13-201ENST00000423971 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
ACTBP13-201ENST00000423971 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
ACTBP13-201ENST00000423971 HNRNPUL2Q1KMD3 747 aaKnown RBP13.14□□□□□ -0.31
ACTBP13-201ENST00000423971 ITGAEP38570 1179 aa13.13□□□□□ -0.31
ACTBP13-201ENST00000423971 WRNQ14191 1432 aaPredicted RBP eCLIP13.12□□□□□ -0.31
ACTBP13-201ENST00000423971 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
ACTBP13-201ENST00000423971 CCER1Q8TC90 406 aaPredicted RBP13.1□□□□□ -0.31
ACTBP13-201ENST00000423971 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
ACTBP13-201ENST00000423971 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
ACTBP13-201ENST00000423971 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
ACTBP13-201ENST00000423971 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
ACTBP13-201ENST00000423971 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
ACTBP13-201ENST00000423971 FBLN2P98095 1184 aa12.93□□□□□ -0.34
ACTBP13-201ENST00000423971 GTF3C3Q9Y5Q9 886 aa12.9□□□□□ -0.34
ACTBP13-201ENST00000423971 NESP48681 1621 aa12.9□□□□□ -0.35
ACTBP13-201ENST00000423971 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
ACTBP13-201ENST00000423971 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
ACTBP13-201ENST00000423971 CLIP1P30622 1438 aa12.85□□□□□ -0.35
ACTBP13-201ENST00000423971 RAPGEF2Q9Y4G8 1499 aa12.84□□□□□ -0.35
ACTBP13-201ENST00000423971 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
ACTBP13-201ENST00000423971 NCAPD3P42695 1498 aa12.82□□□□□ -0.36
ACTBP13-201ENST00000423971 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
ACTBP13-201ENST00000423971 CUX2O14529 1486 aa12.82□□□□□ -0.36
ACTBP13-201ENST00000423971 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
ACTBP13-201ENST00000423971 GOLGA3Q08378 1498 aa12.81□□□□□ -0.36
ACTBP13-201ENST00000423971 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
ACTBP13-201ENST00000423971 TNIKQ9UKE5 1360 aa12.8□□□□□ -0.36
ACTBP13-201ENST00000423971 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
ACTBP13-201ENST00000423971 ACIN1Q9UKV3 1341 aaKnown RBP12.77□□□□□ -0.36
ACTBP13-201ENST00000423971 KANK4Q5T7N3 995 aaPredicted RBP12.77□□□□□ -0.37
ACTBP13-201ENST00000423971 RAD54L2Q9Y4B4 1467 aa12.76□□□□□ -0.37
ACTBP13-201ENST00000423971 BCL11AQ9H165 835 aa12.76□□□□□ -0.37
ACTBP13-201ENST00000423971 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
ACTBP13-201ENST00000423971 CEP164Q9UPV0 1460 aa12.73□□□□□ -0.37
ACTBP13-201ENST00000423971 FANCD2Q9BXW9 1451 aa12.71□□□□□ -0.37
ACTBP13-201ENST00000423971 CUX1P39880 1505 aa12.7□□□□□ -0.38
ACTBP13-201ENST00000423971 EEA1Q15075 1411 aa12.7□□□□□ -0.38
ACTBP13-201ENST00000423971 PEG3Q9GZU2 1588 aa12.69□□□□□ -0.38
ACTBP13-201ENST00000423971 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
ACTBP13-201ENST00000423971 CARMIL1Q5VZK9 1371 aa12.69□□□□□ -0.38
ACTBP13-201ENST00000423971 CFTRP13569 1480 aa12.68□□□□□ -0.38
ACTBP13-201ENST00000423971 NEUROD1Q13562 356 aa12.67□□□□□ -0.38
ACTBP13-201ENST00000423971 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
ACTBP13-201ENST00000423971 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
ACTBP13-201ENST00000423971 IGF1RP08069 1367 aa12.62□□□□□ -0.39
ACTBP13-201ENST00000423971 CHIC2Q9UKJ5 165 aa12.59□□□□□ -0.39
ACTBP13-201ENST00000423971 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
ACTBP13-201ENST00000423971 TOP2BQ02880 1626 aa12.57□□□□□ -0.4
ACTBP13-201ENST00000423971 CHMP7Q8WUX9 453 aaPredicted RBP12.56□□□□□ -0.4
ACTBP13-201ENST00000423971 FHOD3Q2V2M9 1422 aa12.55□□□□□ -0.4
ACTBP13-201ENST00000423971 VPS8Q8N3P4 1428 aa12.55□□□□□ -0.4
ACTBP13-201ENST00000423971 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.4
ACTBP13-201ENST00000423971 ZNF777Q9ULD5 760 aaPredicted RBP12.54□□□□□ -0.4
ACTBP13-201ENST00000423971 PDS5BQ9NTI5 1447 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms