RNA–Protein interactions for RNA: ENST00000423105.5

NIFK-202, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 3

Gene NIFK, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-202ENST00000423105 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
NIFK-202ENST00000423105 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
NIFK-202ENST00000423105 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
NIFK-202ENST00000423105 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
NIFK-202ENST00000423105 FOXD1Q16676 465 aa21.21■□□□□ 0.99
NIFK-202ENST00000423105 POTEDQ86YR6 584 aa21.05■□□□□ 0.96
NIFK-202ENST00000423105 MSH5O43196 834 aa20■□□□□ 0.79
NIFK-202ENST00000423105 PIAS4Q8N2W9 510 aaPredicted RBP19.53■□□□□ 0.72
NIFK-202ENST00000423105 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
NIFK-202ENST00000423105 ADRA2BP18089 450 aa19.11■□□□□ 0.65
NIFK-202ENST00000423105 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
NIFK-202ENST00000423105 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
NIFK-202ENST00000423105 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
NIFK-202ENST00000423105 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
NIFK-202ENST00000423105 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
NIFK-202ENST00000423105 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
NIFK-202ENST00000423105 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
NIFK-202ENST00000423105 HOXD11P31277 338 aaPredicted RBP16.81■□□□□ 0.28
NIFK-202ENST00000423105 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
NIFK-202ENST00000423105 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
NIFK-202ENST00000423105 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
NIFK-202ENST00000423105 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
NIFK-202ENST00000423105 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
NIFK-202ENST00000423105 POTEHQ6S545 545 aa16.29■□□□□ 0.2
NIFK-202ENST00000423105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.147e-11■□□□□ 10.2
NIFK-202ENST00000423105 DSG3P32926 999 aa15.74■□□□□ 0.11
NIFK-202ENST00000423105 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
NIFK-202ENST00000423105 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
NIFK-202ENST00000423105 CAPN15O75808 1086 aa15.56■□□□□ 0.08
NIFK-202ENST00000423105 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
NIFK-202ENST00000423105 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
NIFK-202ENST00000423105 KCNA4P22459 653 aa15.46■□□□□ 0.07
NIFK-202ENST00000423105 ABCB7O75027 752 aa15.21■□□□□ 0.03
NIFK-202ENST00000423105 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
NIFK-202ENST00000423105 SLC4A2P04920 1241 aa15.03■□□□□ -0
NIFK-202ENST00000423105 ZNF219Q9P2Y4 722 aaPredicted RBP15□□□□□ -0.01
NIFK-202ENST00000423105 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
NIFK-202ENST00000423105 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
NIFK-202ENST00000423105 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
NIFK-202ENST00000423105 APLP2Q06481 763 aa14.82□□□□□ -0.04
NIFK-202ENST00000423105 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
NIFK-202ENST00000423105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.67□□□□□ -0.06
NIFK-202ENST00000423105 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
NIFK-202ENST00000423105 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
NIFK-202ENST00000423105 POLA2Q14181 598 aa14.56□□□□□ -0.08
NIFK-202ENST00000423105 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
NIFK-202ENST00000423105 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
NIFK-202ENST00000423105 HAX1O00165 279 aa14.38□□□□□ -0.11
NIFK-202ENST00000423105 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
NIFK-202ENST00000423105 EVX2Q03828 476 aa14.33□□□□□ -0.12
NIFK-202ENST00000423105 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
NIFK-202ENST00000423105 FXR2P51116 673 aaKnown RBP eCLIP14.27□□□□□ -0.13
NIFK-202ENST00000423105 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
NIFK-202ENST00000423105 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
NIFK-202ENST00000423105 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
NIFK-202ENST00000423105 ZBTB22O15209 634 aa14.18□□□□□ -0.14
NIFK-202ENST00000423105 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
NIFK-202ENST00000423105 ATF5Q9Y2D1 282 aaPredicted RBP14.14□□□□□ -0.15
NIFK-202ENST00000423105 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
NIFK-202ENST00000423105 ZBTB12Q9Y330 459 aaPredicted RBP14.04□□□□□ -0.16
NIFK-202ENST00000423105 LHX8Q68G74 356 aa13.93□□□□□ -0.18
NIFK-202ENST00000423105 GABBR2O75899 941 aa13.85□□□□□ -0.19
NIFK-202ENST00000423105 ATXN8OSP0DMR3 200 aa13.85□□□□□ -0.19
NIFK-202ENST00000423105 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
NIFK-202ENST00000423105 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
NIFK-202ENST00000423105 PLSCR2Q9NRY7 297 aa13.7□□□□□ -0.22
NIFK-202ENST00000423105 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
NIFK-202ENST00000423105 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
NIFK-202ENST00000423105 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
NIFK-202ENST00000423105 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
NIFK-202ENST00000423105 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
NIFK-202ENST00000423105 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
NIFK-202ENST00000423105 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
NIFK-202ENST00000423105 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
NIFK-202ENST00000423105 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
NIFK-202ENST00000423105 FBLN2P98095 1184 aa13.39□□□□□ -0.27
NIFK-202ENST00000423105 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
NIFK-202ENST00000423105 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
NIFK-202ENST00000423105 PRR29P0C7W0 189 aa13.26□□□□□ -0.29
NIFK-202ENST00000423105 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
NIFK-202ENST00000423105 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
NIFK-202ENST00000423105 POTEB2H3BUK9 544 aa13.2□□□□□ -0.3
NIFK-202ENST00000423105 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
NIFK-202ENST00000423105 POTEMA6NI47 508 aa13.17□□□□□ -0.3
NIFK-202ENST00000423105 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
NIFK-202ENST00000423105 CLCN6P51797 869 aa13.15□□□□□ -0.3
NIFK-202ENST00000423105 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
NIFK-202ENST00000423105 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
NIFK-202ENST00000423105 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
NIFK-202ENST00000423105 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
NIFK-202ENST00000423105 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
NIFK-202ENST00000423105 LCE2DQ5TA82 110 aaPredicted RBP12.9□□□□□ -0.34
NIFK-202ENST00000423105 POTEJP0CG39 1038 aa12.88□□□□□ -0.35
NIFK-202ENST00000423105 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
NIFK-202ENST00000423105 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
NIFK-202ENST00000423105 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
NIFK-202ENST00000423105 PHF12Q96QT6 1004 aa12.82□□□□□ -0.36
NIFK-202ENST00000423105 FKBP8Q14318 412 aa12.77□□□□□ -0.37
NIFK-202ENST00000423105 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
NIFK-202ENST00000423105 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms