RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 NISCHQ9Y2I1 1504 aa29.85■■■□□ 2.37
CDCA3-202ENST00000422785 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
CDCA3-202ENST00000422785 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
CDCA3-202ENST00000422785 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.57
CDCA3-202ENST00000422785 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.54
CDCA3-202ENST00000422785 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
CDCA3-202ENST00000422785 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
CDCA3-202ENST00000422785 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
CDCA3-202ENST00000422785 ABCC9O60706 1549 aa23.89■■□□□ 1.42
CDCA3-202ENST00000422785 NACADO15069 1562 aa23.83■■□□□ 1.41
CDCA3-202ENST00000422785 SCRIBQ14160 1630 aa23.79■■□□□ 1.4
CDCA3-202ENST00000422785 RB1CC1Q8TDY2 1594 aa23.5■■□□□ 1.35
CDCA3-202ENST00000422785 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
CDCA3-202ENST00000422785 RSF1Q96T23 1441 aaPredicted RBP23.4■■□□□ 1.34
CDCA3-202ENST00000422785 CECR2Q9BXF3 1484 aa23.19■■□□□ 1.3
CDCA3-202ENST00000422785 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
CDCA3-202ENST00000422785 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
CDCA3-202ENST00000422785 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
CDCA3-202ENST00000422785 WIZO95785 1651 aa22.95■■□□□ 1.26
CDCA3-202ENST00000422785 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
CDCA3-202ENST00000422785 BICRAQ9NZM4 1560 aa22.82■■□□□ 1.24
CDCA3-202ENST00000422785 TOP2AP11388 1531 aaKnown RBP22.69■■□□□ 1.22
CDCA3-202ENST00000422785 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
CDCA3-202ENST00000422785 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
CDCA3-202ENST00000422785 LOC105371045A0A1W2PR82 267 aa22.59■■□□□ 1.21
CDCA3-202ENST00000422785 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
CDCA3-202ENST00000422785 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
CDCA3-202ENST00000422785 CCDC88BA6NC98 1476 aa22.51■■□□□ 1.19
CDCA3-202ENST00000422785 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
CDCA3-202ENST00000422785 ATAD2BQ9ULI0 1458 aa22.32■■□□□ 1.16
CDCA3-202ENST00000422785 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
CDCA3-202ENST00000422785 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
CDCA3-202ENST00000422785 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
CDCA3-202ENST00000422785 PCGF6Q9BYE7 350 aa22.15■■□□□ 1.14
CDCA3-202ENST00000422785 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
CDCA3-202ENST00000422785 HMGXB3Q12766 1538 aa22.02■■□□□ 1.11
CDCA3-202ENST00000422785 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.11
CDCA3-202ENST00000422785 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
CDCA3-202ENST00000422785 TRIM26Q12899 539 aaPredicted RBP21.98■■□□□ 1.11
CDCA3-202ENST00000422785 HRCP23327 699 aa21.96■■□□□ 1.11
CDCA3-202ENST00000422785 EEA1Q15075 1411 aa21.96■■□□□ 1.11
CDCA3-202ENST00000422785 SOGA1O94964 1423 aa21.94■■□□□ 1.1
CDCA3-202ENST00000422785 SYNJ1O43426 1573 aa21.89■■□□□ 1.09
CDCA3-202ENST00000422785 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.09
CDCA3-202ENST00000422785 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.08
CDCA3-202ENST00000422785 TNIKQ9UKE5 1360 aa21.75■■□□□ 1.07
CDCA3-202ENST00000422785 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
CDCA3-202ENST00000422785 CFTRP13569 1480 aa21.7■■□□□ 1.06
CDCA3-202ENST00000422785 GOLGA3Q08378 1498 aa21.7■■□□□ 1.06
CDCA3-202ENST00000422785 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
CDCA3-202ENST00000422785 CEP162Q5TB80 1403 aa21.69■■□□□ 1.06
CDCA3-202ENST00000422785 KIF21BO75037 1637 aa21.64■■□□□ 1.06
CDCA3-202ENST00000422785 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
CDCA3-202ENST00000422785 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
CDCA3-202ENST00000422785 CC2D2AQ9P2K1 1620 aa21.61■■□□□ 1.05
CDCA3-202ENST00000422785 PRDM2Q13029 1718 aa21.57■■□□□ 1.04
CDCA3-202ENST00000422785 CUX1P39880 1505 aa21.56■■□□□ 1.04
CDCA3-202ENST00000422785 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
CDCA3-202ENST00000422785 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
CDCA3-202ENST00000422785 RAPGEF2Q9Y4G8 1499 aa21.46■■□□□ 1.03
CDCA3-202ENST00000422785 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
CDCA3-202ENST00000422785 PRXQ9BXM0 1461 aa21.39■■□□□ 1.01
CDCA3-202ENST00000422785 CLIP1P30622 1438 aa21.39■■□□□ 1.01
CDCA3-202ENST00000422785 KIF27Q86VH2 1401 aa21.39■■□□□ 1.01
CDCA3-202ENST00000422785 ZEB1P37275 1124 aaPredicted RBP21.37■■□□□ 1.01
CDCA3-202ENST00000422785 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
CDCA3-202ENST00000422785 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
CDCA3-202ENST00000422785 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
CDCA3-202ENST00000422785 CUX2O14529 1486 aa21.21■□□□□ 0.99
CDCA3-202ENST00000422785 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
CDCA3-202ENST00000422785 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
CDCA3-202ENST00000422785 NESP48681 1621 aa21.16■□□□□ 0.98
CDCA3-202ENST00000422785 IGF1RP08069 1367 aa21.16■□□□□ 0.98
CDCA3-202ENST00000422785 LAMC3Q9Y6N6 1575 aa21.16■□□□□ 0.98
CDCA3-202ENST00000422785 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
CDCA3-202ENST00000422785 TOPBP1Q92547 1522 aa21.11■□□□□ 0.97
CDCA3-202ENST00000422785 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
CDCA3-202ENST00000422785 APLP2Q06481 763 aa21.1■□□□□ 0.97
CDCA3-202ENST00000422785 CARMIL1Q5VZK9 1371 aa21.06■□□□□ 0.96
CDCA3-202ENST00000422785 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
CDCA3-202ENST00000422785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.05■□□□□ 0.96
CDCA3-202ENST00000422785 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
CDCA3-202ENST00000422785 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
CDCA3-202ENST00000422785 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
CDCA3-202ENST00000422785 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
CDCA3-202ENST00000422785 PDS5BQ9NTI5 1447 aa20.99■□□□□ 0.95
CDCA3-202ENST00000422785 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
CDCA3-202ENST00000422785 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
CDCA3-202ENST00000422785 WDR97A6NE52 1622 aa20.91■□□□□ 0.94
CDCA3-202ENST00000422785 CUL7Q14999 1698 aa20.9■□□□□ 0.94
CDCA3-202ENST00000422785 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
CDCA3-202ENST00000422785 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
CDCA3-202ENST00000422785 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
CDCA3-202ENST00000422785 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
CDCA3-202ENST00000422785 MAP3K1Q13233 1512 aa20.78■□□□□ 0.92
CDCA3-202ENST00000422785 GAPVD1Q14C86 1478 aa20.77■□□□□ 0.92
CDCA3-202ENST00000422785 TDRD9Q8NDG6 1382 aaKnown RBP20.77■□□□□ 0.91
CDCA3-202ENST00000422785 CTTNBP2Q8WZ74 1663 aa20.75■□□□□ 0.91
CDCA3-202ENST00000422785 FHAD1B1AJZ9 1412 aa20.75■□□□□ 0.91
CDCA3-202ENST00000422785 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms