RNA–Protein interactions for RNA: ENST00000422734.1

NUP35P1-201, Transcript of nucleoporin 35 pseudogene 1, humanhuman

BASIC

Gene NUP35P1, Length 947 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35P1-201ENST00000422734 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
NUP35P1-201ENST00000422734 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
NUP35P1-201ENST00000422734 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
NUP35P1-201ENST00000422734 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
NUP35P1-201ENST00000422734 FOXD1Q16676 465 aa19.51■□□□□ 0.71
NUP35P1-201ENST00000422734 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
NUP35P1-201ENST00000422734 MSH5O43196 834 aa18.54■□□□□ 0.56
NUP35P1-201ENST00000422734 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.48
NUP35P1-201ENST00000422734 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
NUP35P1-201ENST00000422734 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
NUP35P1-201ENST00000422734 ADRA2BP18089 450 aa17.63■□□□□ 0.41
NUP35P1-201ENST00000422734 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
NUP35P1-201ENST00000422734 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
NUP35P1-201ENST00000422734 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
NUP35P1-201ENST00000422734 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
NUP35P1-201ENST00000422734 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
NUP35P1-201ENST00000422734 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
NUP35P1-201ENST00000422734 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
NUP35P1-201ENST00000422734 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
NUP35P1-201ENST00000422734 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
NUP35P1-201ENST00000422734 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
NUP35P1-201ENST00000422734 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
NUP35P1-201ENST00000422734 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
NUP35P1-201ENST00000422734 POTEHQ6S545 545 aa14.93□□□□□ -0.02
NUP35P1-201ENST00000422734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
NUP35P1-201ENST00000422734 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
NUP35P1-201ENST00000422734 DSG3P32926 999 aa14.52□□□□□ -0.09
NUP35P1-201ENST00000422734 CAPN15O75808 1086 aa14.45□□□□□ -0.1
NUP35P1-201ENST00000422734 U3KPZ7 1027 aaPredicted RBP14.45□□□□□ -0.1
NUP35P1-201ENST00000422734 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
NUP35P1-201ENST00000422734 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
NUP35P1-201ENST00000422734 TRHP20396 242 aaPredicted RBP14.06□□□□□ -0.16
NUP35P1-201ENST00000422734 ABCB7O75027 752 aa14.05□□□□□ -0.16
NUP35P1-201ENST00000422734 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
NUP35P1-201ENST00000422734 APLP2Q06481 763 aa14□□□□□ -0.17
NUP35P1-201ENST00000422734 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
NUP35P1-201ENST00000422734 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
NUP35P1-201ENST00000422734 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
NUP35P1-201ENST00000422734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
NUP35P1-201ENST00000422734 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
NUP35P1-201ENST00000422734 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
NUP35P1-201ENST00000422734 SP7Q8TDD2 431 aaPredicted RBP13.69□□□□□ -0.22
NUP35P1-201ENST00000422734 POLA2Q14181 598 aa13.52□□□□□ -0.25
NUP35P1-201ENST00000422734 KCNA4P22459 653 aa13.48□□□□□ -0.25
NUP35P1-201ENST00000422734 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
NUP35P1-201ENST00000422734 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
NUP35P1-201ENST00000422734 HAX1O00165 279 aa13.31□□□□□ -0.28
NUP35P1-201ENST00000422734 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
NUP35P1-201ENST00000422734 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
NUP35P1-201ENST00000422734 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
NUP35P1-201ENST00000422734 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
NUP35P1-201ENST00000422734 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
NUP35P1-201ENST00000422734 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
NUP35P1-201ENST00000422734 EVX2Q03828 476 aa13.07□□□□□ -0.32
NUP35P1-201ENST00000422734 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
NUP35P1-201ENST00000422734 LHX8Q68G74 356 aa12.83□□□□□ -0.36
NUP35P1-201ENST00000422734 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
NUP35P1-201ENST00000422734 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
NUP35P1-201ENST00000422734 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
NUP35P1-201ENST00000422734 GABBR2O75899 941 aa12.76□□□□□ -0.37
NUP35P1-201ENST00000422734 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
NUP35P1-201ENST00000422734 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
NUP35P1-201ENST00000422734 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
NUP35P1-201ENST00000422734 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
NUP35P1-201ENST00000422734 SPDYE1Q8NFV5 336 aaPredicted RBP12.69□□□□□ -0.38
NUP35P1-201ENST00000422734 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
NUP35P1-201ENST00000422734 FBLN2P98095 1184 aa12.6□□□□□ -0.39
NUP35P1-201ENST00000422734 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
NUP35P1-201ENST00000422734 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
NUP35P1-201ENST00000422734 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
NUP35P1-201ENST00000422734 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
NUP35P1-201ENST00000422734 ZNF692Q9BU19 519 aaPredicted RBP12.48□□□□□ -0.41
NUP35P1-201ENST00000422734 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
NUP35P1-201ENST00000422734 MKRN4PQ13434 485 aaPredicted RBP12.4□□□□□ -0.42
NUP35P1-201ENST00000422734 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
NUP35P1-201ENST00000422734 ZBTB22O15209 634 aa12.37□□□□□ -0.43
NUP35P1-201ENST00000422734 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
NUP35P1-201ENST00000422734 CLCN6P51797 869 aa12.34□□□□□ -0.43
NUP35P1-201ENST00000422734 DCBLD2Q96PD2 775 aa12.28□□□□□ -0.44
NUP35P1-201ENST00000422734 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
NUP35P1-201ENST00000422734 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
NUP35P1-201ENST00000422734 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
NUP35P1-201ENST00000422734 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
NUP35P1-201ENST00000422734 POTEMA6NI47 508 aa12.12□□□□□ -0.47
NUP35P1-201ENST00000422734 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
NUP35P1-201ENST00000422734 POTEGQ6S5H5 508 aa12.06□□□□□ -0.48
NUP35P1-201ENST00000422734 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
NUP35P1-201ENST00000422734 GALR2O43603 387 aaPredicted RBP12.04□□□□□ -0.48
NUP35P1-201ENST00000422734 PCDH10Q9P2E7 1040 aa11.96□□□□□ -0.49
NUP35P1-201ENST00000422734 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
NUP35P1-201ENST00000422734 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
NUP35P1-201ENST00000422734 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
NUP35P1-201ENST00000422734 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
NUP35P1-201ENST00000422734 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
NUP35P1-201ENST00000422734 METRNQ9UJH8 293 aa11.79□□□□□ -0.52
NUP35P1-201ENST00000422734 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
NUP35P1-201ENST00000422734 MAMSTRQ6ZN01 415 aa11.76□□□□□ -0.53
NUP35P1-201ENST00000422734 C7P10643 843 aa11.74□□□□□ -0.53
NUP35P1-201ENST00000422734 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
NUP35P1-201ENST00000422734 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms