RNA–Protein interactions for RNA: ENST00000420933.2

ZNF839-201, Transcript of zinc finger protein 839, humanhuman

TSL 2

Gene ZNF839, Length 2,123 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF839-201ENST00000420933 NISCHQ9Y2I1 1504 aa27.24■■□□□ 1.95
ZNF839-201ENST00000420933 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
ZNF839-201ENST00000420933 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
ZNF839-201ENST00000420933 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
ZNF839-201ENST00000420933 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
ZNF839-201ENST00000420933 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
ZNF839-201ENST00000420933 DCAF8L2P0C7V8 631 aa22.19■■□□□ 1.14
ZNF839-201ENST00000420933 MYO15BQ96JP2 1530 aa22.09■■□□□ 1.13
ZNF839-201ENST00000420933 ABCC9O60706 1549 aa21.98■■□□□ 1.11
ZNF839-201ENST00000420933 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.08
ZNF839-201ENST00000420933 PELP1Q8IZL8 1130 aaKnown RBP21.77■■□□□ 1.08
ZNF839-201ENST00000420933 NACADO15069 1562 aa21.72■■□□□ 1.07
ZNF839-201ENST00000420933 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
ZNF839-201ENST00000420933 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
ZNF839-201ENST00000420933 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
ZNF839-201ENST00000420933 HRCP23327 699 aa21.37■■□□□ 1.01
ZNF839-201ENST00000420933 MYT1Q01538 1121 aa21.23■□□□□ 0.99
ZNF839-201ENST00000420933 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
ZNF839-201ENST00000420933 CECR2Q9BXF3 1484 aa21.06■□□□□ 0.96
ZNF839-201ENST00000420933 LOC105371045A0A1W2PR82 267 aa21.05■□□□□ 0.96
ZNF839-201ENST00000420933 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
ZNF839-201ENST00000420933 BAZ1AQ9NRL2 1556 aaPredicted RBP21.01■□□□□ 0.95
ZNF839-201ENST00000420933 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
ZNF839-201ENST00000420933 WIZO95785 1651 aa20.91■□□□□ 0.94
ZNF839-201ENST00000420933 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
ZNF839-201ENST00000420933 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
ZNF839-201ENST00000420933 PPARGC1BQ86YN6 1023 aaKnown RBP20.76■□□□□ 0.91
ZNF839-201ENST00000420933 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
ZNF839-201ENST00000420933 TOP2AP11388 1531 aaKnown RBP20.75■□□□□ 0.91
ZNF839-201ENST00000420933 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
ZNF839-201ENST00000420933 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
ZNF839-201ENST00000420933 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
ZNF839-201ENST00000420933 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
ZNF839-201ENST00000420933 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
ZNF839-201ENST00000420933 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
ZNF839-201ENST00000420933 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
ZNF839-201ENST00000420933 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
ZNF839-201ENST00000420933 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
ZNF839-201ENST00000420933 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
ZNF839-201ENST00000420933 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
ZNF839-201ENST00000420933 ABCC8Q09428 1581 aa20.27■□□□□ 0.84
ZNF839-201ENST00000420933 EEA1Q15075 1411 aa20.24■□□□□ 0.83
ZNF839-201ENST00000420933 BAZ1BQ9UIG0 1483 aaKnown RBP20.22■□□□□ 0.83
ZNF839-201ENST00000420933 TTBK1Q5TCY1 1321 aaPredicted RBP20.2■□□□□ 0.82
ZNF839-201ENST00000420933 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.82
ZNF839-201ENST00000420933 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
ZNF839-201ENST00000420933 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
ZNF839-201ENST00000420933 CEP162Q5TB80 1403 aa20.05■□□□□ 0.8
ZNF839-201ENST00000420933 SOGA1O94964 1423 aa20.04■□□□□ 0.8
ZNF839-201ENST00000420933 TNIKQ9UKE5 1360 aa20.04■□□□□ 0.8
ZNF839-201ENST00000420933 NCAPD3P42695 1498 aa20.02■□□□□ 0.8
ZNF839-201ENST00000420933 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
ZNF839-201ENST00000420933 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
ZNF839-201ENST00000420933 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
ZNF839-201ENST00000420933 GOLGA3Q08378 1498 aa19.94■□□□□ 0.78
ZNF839-201ENST00000420933 KIF21BO75037 1637 aa19.91■□□□□ 0.78
ZNF839-201ENST00000420933 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
ZNF839-201ENST00000420933 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
ZNF839-201ENST00000420933 CC2D2AQ9P2K1 1620 aa19.88■□□□□ 0.77
ZNF839-201ENST00000420933 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
ZNF839-201ENST00000420933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.85■□□□□ 0.77
ZNF839-201ENST00000420933 CCER1Q8TC90 406 aaPredicted RBP19.81■□□□□ 0.76
ZNF839-201ENST00000420933 ACIN1Q9UKV3 1341 aaKnown RBP19.8■□□□□ 0.76
ZNF839-201ENST00000420933 UBTFP17480 764 aaKnown RBP19.76■□□□□ 0.75
ZNF839-201ENST00000420933 CFTRP13569 1480 aa19.76■□□□□ 0.75
ZNF839-201ENST00000420933 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
ZNF839-201ENST00000420933 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
ZNF839-201ENST00000420933 CUX1P39880 1505 aa19.64■□□□□ 0.73
ZNF839-201ENST00000420933 CLIP1P30622 1438 aa19.63■□□□□ 0.73
ZNF839-201ENST00000420933 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
ZNF839-201ENST00000420933 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
ZNF839-201ENST00000420933 NEUROD1Q13562 356 aa19.59■□□□□ 0.73
ZNF839-201ENST00000420933 PRXQ9BXM0 1461 aa19.58■□□□□ 0.73
ZNF839-201ENST00000420933 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
ZNF839-201ENST00000420933 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
ZNF839-201ENST00000420933 DIEXFQ68CQ4 756 aaKnown RBP19.54■□□□□ 0.72
ZNF839-201ENST00000420933 CADPSQ9ULU8 1353 aa19.54■□□□□ 0.72
ZNF839-201ENST00000420933 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
ZNF839-201ENST00000420933 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
ZNF839-201ENST00000420933 BCL11AQ9H165 835 aa19.4■□□□□ 0.7
ZNF839-201ENST00000420933 APLP2Q06481 763 aa19.39■□□□□ 0.69
ZNF839-201ENST00000420933 ARAP1Q96P48 1450 aa19.38■□□□□ 0.69
ZNF839-201ENST00000420933 CUX2O14529 1486 aa19.32■□□□□ 0.68
ZNF839-201ENST00000420933 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
ZNF839-201ENST00000420933 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
ZNF839-201ENST00000420933 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
ZNF839-201ENST00000420933 DNMBPQ6XZF7 1577 aa19.3■□□□□ 0.68
ZNF839-201ENST00000420933 IGF1RP08069 1367 aa19.28■□□□□ 0.68
ZNF839-201ENST00000420933 LAMC3Q9Y6N6 1575 aa19.25■□□□□ 0.67
ZNF839-201ENST00000420933 CLSPNQ9HAW4 1339 aa19.24■□□□□ 0.67
ZNF839-201ENST00000420933 RRBP1Q9P2E9 1410 aaKnown RBP19.22■□□□□ 0.67
ZNF839-201ENST00000420933 ARHGAP35Q9NRY4 1499 aa19.21■□□□□ 0.67
ZNF839-201ENST00000420933 CARMIL1Q5VZK9 1371 aa19.21■□□□□ 0.67
ZNF839-201ENST00000420933 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
ZNF839-201ENST00000420933 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
ZNF839-201ENST00000420933 DHX57Q6P158 1386 aaKnown RBP19.18■□□□□ 0.66
ZNF839-201ENST00000420933 MAP3K1Q13233 1512 aa19.16■□□□□ 0.66
ZNF839-201ENST00000420933 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
ZNF839-201ENST00000420933 CUL7Q14999 1698 aa19.15■□□□□ 0.66
ZNF839-201ENST00000420933 POLA1P09884 1462 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms