RNA–Protein interactions for RNA: ENST00000420798.6

TRO-208, Transcript of trophinin, humanhuman

TSL 2 BASIC

Gene TRO, Length 3,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-208ENST00000420798 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
TRO-208ENST00000420798 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
TRO-208ENST00000420798 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
TRO-208ENST00000420798 SUPT5HO00267 1087 aaKnown RBP17.73■□□□□ 0.43
TRO-208ENST00000420798 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
TRO-208ENST00000420798 CHIC1Q5VXU3 224 aa16.68■□□□□ 0.26
TRO-208ENST00000420798 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
TRO-208ENST00000420798 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
TRO-208ENST00000420798 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
TRO-208ENST00000420798 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
TRO-208ENST00000420798 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
TRO-208ENST00000420798 PPARGC1BQ86YN6 1023 aaKnown RBP16.44■□□□□ 0.22
TRO-208ENST00000420798 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
TRO-208ENST00000420798 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
TRO-208ENST00000420798 HRCP23327 699 aa16.17■□□□□ 0.18
TRO-208ENST00000420798 ABCC9O60706 1549 aa16.14■□□□□ 0.17
TRO-208ENST00000420798 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
TRO-208ENST00000420798 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
TRO-208ENST00000420798 RANGAP1P46060 587 aaPredicted RBP15.87■□□□□ 0.13
TRO-208ENST00000420798 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.134e-7■■□□□ 14.5
TRO-208ENST00000420798 TRIM26Q12899 539 aaPredicted RBP15.82■□□□□ 0.12
TRO-208ENST00000420798 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
TRO-208ENST00000420798 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
TRO-208ENST00000420798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
TRO-208ENST00000420798 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
TRO-208ENST00000420798 UBTFP17480 764 aaKnown RBP15.59■□□□□ 0.09
TRO-208ENST00000420798 DCAF1Q9Y4B6 1507 aa15.56■□□□□ 0.08
TRO-208ENST00000420798 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
TRO-208ENST00000420798 MROH2BQ7Z745 1585 aa15.52■□□□□ 0.07
TRO-208ENST00000420798 WIZO95785 1651 aa15.4■□□□□ 0.06
TRO-208ENST00000420798 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
TRO-208ENST00000420798 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
TRO-208ENST00000420798 YTHDC1Q96MU7 727 aaKnown RBP15.29■□□□□ 0.04
TRO-208ENST00000420798 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.04
TRO-208ENST00000420798 SOGA1O94964 1423 aa15.26■□□□□ 0.03
TRO-208ENST00000420798 CCDC88BA6NC98 1476 aa15.24■□□□□ 0.03
TRO-208ENST00000420798 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
TRO-208ENST00000420798 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.03
TRO-208ENST00000420798 NACADO15069 1562 aa15.19■□□□□ 0.02
TRO-208ENST00000420798 ITGAEP38570 1179 aa15.19■□□□□ 0.02
TRO-208ENST00000420798 APLP2Q06481 763 aa15.15■□□□□ 0.02
TRO-208ENST00000420798 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
TRO-208ENST00000420798 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
TRO-208ENST00000420798 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
TRO-208ENST00000420798 CEP162Q5TB80 1403 aa15.06■□□□□ 0
TRO-208ENST00000420798 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
TRO-208ENST00000420798 NEUROD1Q13562 356 aa15.02■□□□□ -0
TRO-208ENST00000420798 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
TRO-208ENST00000420798 GTF3C3Q9Y5Q9 886 aa14.94□□□□□ -0.02
TRO-208ENST00000420798 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
TRO-208ENST00000420798 SMARCA4P51532 1647 aa14.89□□□□□ -0.03
TRO-208ENST00000420798 SMARCA2P51531 1590 aa14.88□□□□□ -0.03
TRO-208ENST00000420798 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
TRO-208ENST00000420798 TNIKQ9UKE5 1360 aa14.84□□□□□ -0.03
TRO-208ENST00000420798 MIER1Q8N108 512 aa14.84□□□□□ -0.03
TRO-208ENST00000420798 ACIN1Q9UKV3 1341 aaKnown RBP14.83□□□□□ -0.03
TRO-208ENST00000420798 CLIP1P30622 1438 aa14.82□□□□□ -0.04
TRO-208ENST00000420798 KANK4Q5T7N3 995 aaPredicted RBP14.82□□□□□ -0.04
TRO-208ENST00000420798 PELP1Q8IZL8 1130 aaKnown RBP14.82□□□□□ -0.04
TRO-208ENST00000420798 ZNF316A6NFI3 1004 aaPredicted RBP14.82□□□□□ -0.04
TRO-208ENST00000420798 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
TRO-208ENST00000420798 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
TRO-208ENST00000420798 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
TRO-208ENST00000420798 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
TRO-208ENST00000420798 ARID3CA6NKF2 412 aa14.75□□□□□ -0.05
TRO-208ENST00000420798 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
TRO-208ENST00000420798 FAM50AQ14320 339 aaKnown RBP14.73□□□□□ -0.05
TRO-208ENST00000420798 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
TRO-208ENST00000420798 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
TRO-208ENST00000420798 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
TRO-208ENST00000420798 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
TRO-208ENST00000420798 EIF4G1Q04637 1599 aaKnown RBP14.65□□□□□ -0.06
TRO-208ENST00000420798 CEP164Q9UPV0 1460 aa14.62□□□□□ -0.07
TRO-208ENST00000420798 CNGB1Q14028 1251 aaPredicted RBP14.61□□□□□ -0.07
TRO-208ENST00000420798 EEA1Q15075 1411 aa14.57□□□□□ -0.08
TRO-208ENST00000420798 SIN3AQ96ST3 1273 aa14.57□□□□□ -0.08
TRO-208ENST00000420798 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
TRO-208ENST00000420798 BCANQ96GW7 911 aa14.55□□□□□ -0.08
TRO-208ENST00000420798 KCNH8Q96L42 1107 aa14.55□□□□□ -0.08
TRO-208ENST00000420798 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
TRO-208ENST00000420798 DDX10Q13206 875 aaKnown RBP14.48□□□□□ -0.09
TRO-208ENST00000420798 CUX2O14529 1486 aa14.46□□□□□ -0.1
TRO-208ENST00000420798 MYT1Q01538 1121 aa14.45□□□□□ -0.1
TRO-208ENST00000420798 KIF21BO75037 1637 aa14.45□□□□□ -0.1
TRO-208ENST00000420798 CHIC2Q9UKJ5 165 aa14.45□□□□□ -0.1
TRO-208ENST00000420798 ARAP1Q96P48 1450 aa14.43□□□□□ -0.1
TRO-208ENST00000420798 KIF27Q86VH2 1401 aa14.43□□□□□ -0.1
TRO-208ENST00000420798 SENP3-EIF4A1A0A087X0R7 540 aa14.4□□□□□ -0.1
TRO-208ENST00000420798 DHX57Q6P158 1386 aaKnown RBP14.39□□□□□ -0.11
TRO-208ENST00000420798 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
TRO-208ENST00000420798 CUX1P39880 1505 aa14.36□□□□□ -0.11
TRO-208ENST00000420798 TRIM52Q96A61 297 aa14.36□□□□□ -0.11
TRO-208ENST00000420798 CCNB3Q8WWL7 1395 aa14.34□□□□□ -0.11
TRO-208ENST00000420798 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.11
TRO-208ENST00000420798 POLR3GLQ9BT43 218 aa14.33□□□□□ -0.11
TRO-208ENST00000420798 RRP7BPQ9NSQ0 103 aa14.33□□□□□ -0.11
TRO-208ENST00000420798 IGF1RP08069 1367 aa14.33□□□□□ -0.12
TRO-208ENST00000420798 RAD54L2Q9Y4B4 1467 aa14.33□□□□□ -0.12
TRO-208ENST00000420798 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
TRO-208ENST00000420798 FHOD3Q2V2M9 1422 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms