RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
LINC00993-201ENST00000420453 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
LINC00993-201ENST00000420453 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
LINC00993-201ENST00000420453 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
LINC00993-201ENST00000420453 FOXD1Q16676 465 aa18.05■□□□□ 0.48
LINC00993-201ENST00000420453 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
LINC00993-201ENST00000420453 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
LINC00993-201ENST00000420453 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
LINC00993-201ENST00000420453 ADRA2BP18089 450 aa16.93■□□□□ 0.3
LINC00993-201ENST00000420453 MSH5O43196 834 aa16.9■□□□□ 0.3
LINC00993-201ENST00000420453 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
LINC00993-201ENST00000420453 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
LINC00993-201ENST00000420453 MAPK8IP2Q13387 824 aaPredicted RBP15.49■□□□□ 0.07
LINC00993-201ENST00000420453 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
LINC00993-201ENST00000420453 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
LINC00993-201ENST00000420453 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
LINC00993-201ENST00000420453 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
LINC00993-201ENST00000420453 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
LINC00993-201ENST00000420453 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
LINC00993-201ENST00000420453 RNF216Q9NWF9 866 aaPredicted RBP14.84□□□□□ -0.03
LINC00993-201ENST00000420453 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
LINC00993-201ENST00000420453 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
LINC00993-201ENST00000420453 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
LINC00993-201ENST00000420453 KCNA4P22459 653 aa14.37□□□□□ -0.11
LINC00993-201ENST00000420453 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
LINC00993-201ENST00000420453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC00993-201ENST00000420453 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
LINC00993-201ENST00000420453 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
LINC00993-201ENST00000420453 SLC4A2P04920 1241 aa13.82□□□□□ -0.2
LINC00993-201ENST00000420453 CAPN15O75808 1086 aa13.69□□□□□ -0.22
LINC00993-201ENST00000420453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
LINC00993-201ENST00000420453 APLP2Q06481 763 aa13.65□□□□□ -0.22
LINC00993-201ENST00000420453 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
LINC00993-201ENST00000420453 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
LINC00993-201ENST00000420453 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
LINC00993-201ENST00000420453 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
LINC00993-201ENST00000420453 DSG3P32926 999 aa13.52□□□□□ -0.25
LINC00993-201ENST00000420453 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
LINC00993-201ENST00000420453 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
LINC00993-201ENST00000420453 ZNF219Q9P2Y4 722 aaPredicted RBP13.48□□□□□ -0.25
LINC00993-201ENST00000420453 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
LINC00993-201ENST00000420453 ABCB7O75027 752 aa13.35□□□□□ -0.27
LINC00993-201ENST00000420453 ZBTB22O15209 634 aa13.16□□□□□ -0.3
LINC00993-201ENST00000420453 POLA2Q14181 598 aa13.15□□□□□ -0.3
LINC00993-201ENST00000420453 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
LINC00993-201ENST00000420453 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
LINC00993-201ENST00000420453 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
LINC00993-201ENST00000420453 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
LINC00993-201ENST00000420453 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
LINC00993-201ENST00000420453 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
LINC00993-201ENST00000420453 POTEHQ6S545 545 aa12.75□□□□□ -0.37
LINC00993-201ENST00000420453 FBLN2P98095 1184 aa12.7□□□□□ -0.38
LINC00993-201ENST00000420453 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
LINC00993-201ENST00000420453 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
LINC00993-201ENST00000420453 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
LINC00993-201ENST00000420453 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
LINC00993-201ENST00000420453 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
LINC00993-201ENST00000420453 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
LINC00993-201ENST00000420453 SPDYE2Q495Y8 402 aa12.52□□□□□ -0.41
LINC00993-201ENST00000420453 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
LINC00993-201ENST00000420453 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
LINC00993-201ENST00000420453 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
LINC00993-201ENST00000420453 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
LINC00993-201ENST00000420453 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
LINC00993-201ENST00000420453 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
LINC00993-201ENST00000420453 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
LINC00993-201ENST00000420453 FXR2P51116 673 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC00993-201ENST00000420453 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC00993-201ENST00000420453 HAX1O00165 279 aa12.1□□□□□ -0.47
LINC00993-201ENST00000420453 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
LINC00993-201ENST00000420453 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
LINC00993-201ENST00000420453 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
LINC00993-201ENST00000420453 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
LINC00993-201ENST00000420453 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
LINC00993-201ENST00000420453 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
LINC00993-201ENST00000420453 C19orf67A6NJJ6 358 aa11.85□□□□□ -0.51
LINC00993-201ENST00000420453 EVX2Q03828 476 aa11.85□□□□□ -0.51
LINC00993-201ENST00000420453 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
LINC00993-201ENST00000420453 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
LINC00993-201ENST00000420453 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
LINC00993-201ENST00000420453 PROM2Q8N271 834 aa11.71□□□□□ -0.53
LINC00993-201ENST00000420453 GABBR2O75899 941 aa11.65□□□□□ -0.54
LINC00993-201ENST00000420453 NPM1P06748 294 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00993-201ENST00000420453 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
LINC00993-201ENST00000420453 CLCN6P51797 869 aa11.59□□□□□ -0.55
LINC00993-201ENST00000420453 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
LINC00993-201ENST00000420453 FKBP8Q14318 412 aa11.58□□□□□ -0.56
LINC00993-201ENST00000420453 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
LINC00993-201ENST00000420453 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
LINC00993-201ENST00000420453 ZNF579Q8NAF0 562 aaKnown RBP11.53□□□□□ -0.56
LINC00993-201ENST00000420453 MIER1Q8N108 512 aa11.51□□□□□ -0.57
LINC00993-201ENST00000420453 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
LINC00993-201ENST00000420453 DCBLD2Q96PD2 775 aa11.43□□□□□ -0.58
LINC00993-201ENST00000420453 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
LINC00993-201ENST00000420453 TSPYL2Q9H2G4 693 aaPredicted RBP11.38□□□□□ -0.59
LINC00993-201ENST00000420453 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
LINC00993-201ENST00000420453 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
LINC00993-201ENST00000420453 GALR2O43603 387 aaPredicted RBP11.36□□□□□ -0.59
LINC00993-201ENST00000420453 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
LINC00993-201ENST00000420453 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms