RNA–Protein interactions for RNA: ENST00000418924.6

RIN3-202, Transcript of Ras and Rab interactor 3, humanhuman

TSL 2

Gene RIN3, Length 3,592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIN3-202ENST00000418924 NISCHQ9Y2I1 1504 aa26.33■■□□□ 1.81
RIN3-202ENST00000418924 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.54
RIN3-202ENST00000418924 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
RIN3-202ENST00000418924 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
RIN3-202ENST00000418924 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
RIN3-202ENST00000418924 PPARGC1BQ86YN6 1023 aaKnown RBP23.38■■□□□ 1.33
RIN3-202ENST00000418924 EHMT2Q96KQ7 1210 aa23.37■■□□□ 1.33
RIN3-202ENST00000418924 LOC105371045A0A1W2PR82 267 aa23.12■■□□□ 1.29
RIN3-202ENST00000418924 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
RIN3-202ENST00000418924 HRCP23327 699 aa23.07■■□□□ 1.28
RIN3-202ENST00000418924 FAM9AQ8IZU1 332 aaPredicted RBP22.9■■□□□ 1.26
RIN3-202ENST00000418924 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
RIN3-202ENST00000418924 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
RIN3-202ENST00000418924 PELP1Q8IZL8 1130 aaKnown RBP22.37■■□□□ 1.17
RIN3-202ENST00000418924 TRIM41Q8WV44 630 aa22.27■■□□□ 1.16
RIN3-202ENST00000418924 TRIM26Q12899 539 aaPredicted RBP22.27■■□□□ 1.15
RIN3-202ENST00000418924 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
RIN3-202ENST00000418924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22■■□□□ 1.11
RIN3-202ENST00000418924 CCER1Q8TC90 406 aaPredicted RBP21.9■■□□□ 1.1
RIN3-202ENST00000418924 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
RIN3-202ENST00000418924 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
RIN3-202ENST00000418924 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
RIN3-202ENST00000418924 DCAF1Q9Y4B6 1507 aa21.73■■□□□ 1.07
RIN3-202ENST00000418924 ZEB1P37275 1124 aaPredicted RBP21.71■■□□□ 1.07
RIN3-202ENST00000418924 MYT1Q01538 1121 aa21.63■■□□□ 1.05
RIN3-202ENST00000418924 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
RIN3-202ENST00000418924 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
RIN3-202ENST00000418924 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
RIN3-202ENST00000418924 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
RIN3-202ENST00000418924 DIEXFQ68CQ4 756 aaKnown RBP21.44■■□□□ 1.02
RIN3-202ENST00000418924 SCRIBQ14160 1630 aa21.41■■□□□ 1.02
RIN3-202ENST00000418924 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
RIN3-202ENST00000418924 RSF1Q96T23 1441 aaPredicted RBP21.34■■□□□ 1.01
RIN3-202ENST00000418924 ACIN1Q9UKV3 1341 aaKnown RBP21.31■■□□□ 1
RIN3-202ENST00000418924 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
RIN3-202ENST00000418924 ABCC9O60706 1549 aa21.26■□□□□ 0.99
RIN3-202ENST00000418924 RB1CC1Q8TDY2 1594 aa21.16■□□□□ 0.98
RIN3-202ENST00000418924 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
RIN3-202ENST00000418924 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
RIN3-202ENST00000418924 ITGAEP38570 1179 aa21■□□□□ 0.95
RIN3-202ENST00000418924 APLP2Q06481 763 aa20.99■□□□□ 0.95
RIN3-202ENST00000418924 MIER1Q8N108 512 aa20.97■□□□□ 0.95
RIN3-202ENST00000418924 ZNF316A6NFI3 1004 aaPredicted RBP20.92■□□□□ 0.94
RIN3-202ENST00000418924 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
RIN3-202ENST00000418924 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
RIN3-202ENST00000418924 SOGA1O94964 1423 aa20.78■□□□□ 0.92
RIN3-202ENST00000418924 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
RIN3-202ENST00000418924 BCANQ96GW7 911 aa20.75■□□□□ 0.91
RIN3-202ENST00000418924 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
RIN3-202ENST00000418924 CEP162Q5TB80 1403 aa20.71■□□□□ 0.91
RIN3-202ENST00000418924 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
RIN3-202ENST00000418924 WIZO95785 1651 aa20.68■□□□□ 0.9
RIN3-202ENST00000418924 RUSC2Q8N2Y8 1516 aa20.65■□□□□ 0.9
RIN3-202ENST00000418924 HIRIP3Q9BW71 556 aaPredicted RBP20.54■□□□□ 0.88
RIN3-202ENST00000418924 BCL11AQ9H165 835 aa20.5■□□□□ 0.87
RIN3-202ENST00000418924 KCNH8Q96L42 1107 aa20.43■□□□□ 0.86
RIN3-202ENST00000418924 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
RIN3-202ENST00000418924 P3H3Q8IVL6 736 aa20.38■□□□□ 0.85
RIN3-202ENST00000418924 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
RIN3-202ENST00000418924 CLIP1P30622 1438 aa20.32■□□□□ 0.84
RIN3-202ENST00000418924 KANK4Q5T7N3 995 aaPredicted RBP20.31■□□□□ 0.84
RIN3-202ENST00000418924 FAM50AQ14320 339 aaKnown RBP20.3■□□□□ 0.84
RIN3-202ENST00000418924 DDX10Q13206 875 aaKnown RBP20.29■□□□□ 0.84
RIN3-202ENST00000418924 SUPT16HQ9Y5B9 1047 aaKnown RBP20.25■□□□□ 0.83
RIN3-202ENST00000418924 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
RIN3-202ENST00000418924 NACADO15069 1562 aa20.24■□□□□ 0.83
RIN3-202ENST00000418924 FKBP8Q14318 412 aa20.21■□□□□ 0.83
RIN3-202ENST00000418924 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
RIN3-202ENST00000418924 GOLGA3Q08378 1498 aa20.19■□□□□ 0.82
RIN3-202ENST00000418924 SIN3AQ96ST3 1273 aa20.18■□□□□ 0.82
RIN3-202ENST00000418924 PRKCSHP14314 528 aaPredicted RBP20.16■□□□□ 0.82
RIN3-202ENST00000418924 IRX6P78412 446 aaPredicted RBP20.15■□□□□ 0.82
RIN3-202ENST00000418924 BAZ1AQ9NRL2 1556 aaPredicted RBP20.11■□□□□ 0.81
RIN3-202ENST00000418924 SENP3-EIF4A1A0A087X0R7 540 aa20.11■□□□□ 0.81
RIN3-202ENST00000418924 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.8
RIN3-202ENST00000418924 NEFLP07196 543 aa20.06■□□□□ 0.8
RIN3-202ENST00000418924 ARID3CA6NKF2 412 aa20.04■□□□□ 0.8
RIN3-202ENST00000418924 TSHZ2Q9NRE2 1034 aa20.02■□□□□ 0.8
RIN3-202ENST00000418924 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
RIN3-202ENST00000418924 VPS8Q8N3P4 1428 aa19.96■□□□□ 0.79
RIN3-202ENST00000418924 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
RIN3-202ENST00000418924 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
RIN3-202ENST00000418924 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
RIN3-202ENST00000418924 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.78
RIN3-202ENST00000418924 ANP32EQ9BTT0 268 aa19.94■□□□□ 0.78
RIN3-202ENST00000418924 EEA1Q15075 1411 aa19.91■□□□□ 0.78
RIN3-202ENST00000418924 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
RIN3-202ENST00000418924 ANP32CO43423 234 aa19.84■□□□□ 0.77
RIN3-202ENST00000418924 ERICH6Q7L0X2 663 aa19.83■□□□□ 0.77
RIN3-202ENST00000418924 CHIC2Q9UKJ5 165 aa19.81■□□□□ 0.76
RIN3-202ENST00000418924 HNRNPUQ00839 825 aaKnown RBP eCLIP19.8■□□□□ 0.76
RIN3-202ENST00000418924 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
RIN3-202ENST00000418924 RAB3GAP2Q9H2M9 1393 aa19.76■□□□□ 0.75
RIN3-202ENST00000418924 CCNB3Q8WWL7 1395 aa19.75■□□□□ 0.75
RIN3-202ENST00000418924 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
RIN3-202ENST00000418924 KIF21BO75037 1637 aa19.73■□□□□ 0.75
RIN3-202ENST00000418924 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
RIN3-202ENST00000418924 FAM9BQ8IZU0 186 aa19.71■□□□□ 0.75
RIN3-202ENST00000418924 RBM19Q9Y4C8 960 aaKnown RBP19.7■□□□□ 0.74
RIN3-202ENST00000418924 ZNF326Q5BKZ1 582 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms