RNA–Protein interactions for RNA: ENST00000417009.5

SEM1-204, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3 BASIC

Gene SEM1, Length 350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-204ENST00000417009 NISCHQ9Y2I1 1504 aa22.15■■□□□ 1.14
SEM1-204ENST00000417009 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
SEM1-204ENST00000417009 ZCCHC6Q5VYS8 1495 aaKnown RBP18.66■□□□□ 0.58
SEM1-204ENST00000417009 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
SEM1-204ENST00000417009 SHROOM4Q9ULL8 1493 aa18.13■□□□□ 0.49
SEM1-204ENST00000417009 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
SEM1-204ENST00000417009 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
SEM1-204ENST00000417009 NACADO15069 1562 aa17.87■□□□□ 0.45
SEM1-204ENST00000417009 ABCC9O60706 1549 aa17.75■□□□□ 0.43
SEM1-204ENST00000417009 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
SEM1-204ENST00000417009 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
SEM1-204ENST00000417009 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
SEM1-204ENST00000417009 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
SEM1-204ENST00000417009 UNC13AQ9UPW8 1703 aa17.19■□□□□ 0.34
SEM1-204ENST00000417009 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
SEM1-204ENST00000417009 CHIC1Q5VXU3 224 aa17.08■□□□□ 0.32
SEM1-204ENST00000417009 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
SEM1-204ENST00000417009 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
SEM1-204ENST00000417009 SMARCA4P51532 1647 aa16.97■□□□□ 0.31
SEM1-204ENST00000417009 WIZO95785 1651 aa16.94■□□□□ 0.3
SEM1-204ENST00000417009 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
SEM1-204ENST00000417009 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
SEM1-204ENST00000417009 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
SEM1-204ENST00000417009 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
SEM1-204ENST00000417009 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
SEM1-204ENST00000417009 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
SEM1-204ENST00000417009 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
SEM1-204ENST00000417009 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
SEM1-204ENST00000417009 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
SEM1-204ENST00000417009 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
SEM1-204ENST00000417009 HMGXB3Q12766 1538 aa16.48■□□□□ 0.23
SEM1-204ENST00000417009 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
SEM1-204ENST00000417009 EEA1Q15075 1411 aa16.37■□□□□ 0.21
SEM1-204ENST00000417009 LOC105371045A0A1W2PR82 267 aa16.34■□□□□ 0.21
SEM1-204ENST00000417009 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
SEM1-204ENST00000417009 WRNQ14191 1432 aaPredicted RBP eCLIP16.29■□□□□ 0.2
SEM1-204ENST00000417009 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
SEM1-204ENST00000417009 PRDM2Q13029 1718 aa16.21■□□□□ 0.19
SEM1-204ENST00000417009 TOP2BQ02880 1626 aa16.15■□□□□ 0.18
SEM1-204ENST00000417009 BIVM-ERCC5R4GMW8 1640 aa16.15■□□□□ 0.18
SEM1-204ENST00000417009 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
SEM1-204ENST00000417009 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
SEM1-204ENST00000417009 CFTRP13569 1480 aa16.13■□□□□ 0.17
SEM1-204ENST00000417009 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
SEM1-204ENST00000417009 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
SEM1-204ENST00000417009 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
SEM1-204ENST00000417009 SOGA1O94964 1423 aa16.07■□□□□ 0.16
SEM1-204ENST00000417009 KIF21BO75037 1637 aa16.06■□□□□ 0.16
SEM1-204ENST00000417009 CEP164Q9UPV0 1460 aa16.05■□□□□ 0.16
SEM1-204ENST00000417009 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
SEM1-204ENST00000417009 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
SEM1-204ENST00000417009 CADPSQ9ULU8 1353 aa16.01■□□□□ 0.15
SEM1-204ENST00000417009 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
SEM1-204ENST00000417009 UBTFP17480 764 aaKnown RBP15.94■□□□□ 0.14
SEM1-204ENST00000417009 CUX1P39880 1505 aa15.94■□□□□ 0.14
SEM1-204ENST00000417009 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
SEM1-204ENST00000417009 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
SEM1-204ENST00000417009 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
SEM1-204ENST00000417009 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
SEM1-204ENST00000417009 HRCP23327 699 aa15.9■□□□□ 0.14
SEM1-204ENST00000417009 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
SEM1-204ENST00000417009 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
SEM1-204ENST00000417009 DNMBPQ6XZF7 1577 aa15.8■□□□□ 0.12
SEM1-204ENST00000417009 PRXQ9BXM0 1461 aa15.79■□□□□ 0.12
SEM1-204ENST00000417009 ZEB1P37275 1124 aaPredicted RBP15.78■□□□□ 0.12
SEM1-204ENST00000417009 CLIP1P30622 1438 aa15.77■□□□□ 0.12
SEM1-204ENST00000417009 RAPGEF2Q9Y4G8 1499 aa15.77■□□□□ 0.11
SEM1-204ENST00000417009 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
SEM1-204ENST00000417009 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
SEM1-204ENST00000417009 CUX2O14529 1486 aa15.71■□□□□ 0.11
SEM1-204ENST00000417009 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
SEM1-204ENST00000417009 APLP2Q06481 763 aa15.69■□□□□ 0.1
SEM1-204ENST00000417009 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
SEM1-204ENST00000417009 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
SEM1-204ENST00000417009 CUL7Q14999 1698 aa15.64■□□□□ 0.09
SEM1-204ENST00000417009 NESP48681 1621 aa15.63■□□□□ 0.09
SEM1-204ENST00000417009 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
SEM1-204ENST00000417009 IGF1RP08069 1367 aa15.61■□□□□ 0.09
SEM1-204ENST00000417009 CARMIL1Q5VZK9 1371 aa15.6■□□□□ 0.09
SEM1-204ENST00000417009 WDR97A6NE52 1622 aa15.58■□□□□ 0.09
SEM1-204ENST00000417009 KIF21AQ7Z4S6 1674 aa15.56■□□□□ 0.08
SEM1-204ENST00000417009 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
SEM1-204ENST00000417009 ARAP1Q96P48 1450 aa15.52■□□□□ 0.07
SEM1-204ENST00000417009 PPARGC1BQ86YN6 1023 aaKnown RBP15.51■□□□□ 0.07
SEM1-204ENST00000417009 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
SEM1-204ENST00000417009 CTTNBP2Q8WZ74 1663 aa15.5■□□□□ 0.07
SEM1-204ENST00000417009 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
SEM1-204ENST00000417009 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
SEM1-204ENST00000417009 MRC2Q9UBG0 1479 aa15.48■□□□□ 0.07
SEM1-204ENST00000417009 ARHGAP35Q9NRY4 1499 aa15.46■□□□□ 0.07
SEM1-204ENST00000417009 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
SEM1-204ENST00000417009 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
SEM1-204ENST00000417009 MAP3K1Q13233 1512 aa15.45■□□□□ 0.06
SEM1-204ENST00000417009 RANGAP1P46060 587 aaPredicted RBP15.44■□□□□ 0.06
SEM1-204ENST00000417009 TARBP1Q13395 1621 aaKnown RBP15.42■□□□□ 0.06
SEM1-204ENST00000417009 CCER1Q8TC90 406 aaPredicted RBP15.39■□□□□ 0.05
SEM1-204ENST00000417009 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
SEM1-204ENST00000417009 WDR62O43379 1518 aa15.38■□□□□ 0.05
SEM1-204ENST00000417009 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
SEM1-204ENST00000417009 TTBK1Q5TCY1 1321 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms