RNA–Protein interactions for RNA: ENST00000416992.6

MKLN1-202, Transcript of muskelin 1, humanhuman

TSL 3

Gene MKLN1, Length 864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKLN1-202ENST00000416992 AEBP2Q6ZN18 517 aaPredicted RBP31.01■■■□□ 2.55
MKLN1-202ENST00000416992 CHIC1Q5VXU3 224 aa29.85■■■□□ 2.37
MKLN1-202ENST00000416992 SENP3Q9H4L4 574 aaPredicted RBP26.28■■□□□ 1.8
MKLN1-202ENST00000416992 PHF23Q9BUL5 403 aaPredicted RBP26.27■■□□□ 1.8
MKLN1-202ENST00000416992 FOXD1Q16676 465 aa24.49■■□□□ 1.51
MKLN1-202ENST00000416992 PLPPR3Q6T4P5 718 aa24.02■■□□□ 1.44
MKLN1-202ENST00000416992 PPP6R1Q9UPN7 881 aa23.31■■□□□ 1.32
MKLN1-202ENST00000416992 ADRA2BP18089 450 aa23.21■■□□□ 1.31
MKLN1-202ENST00000416992 PIAS4Q8N2W9 510 aaPredicted RBP22.93■■□□□ 1.26
MKLN1-202ENST00000416992 MSH5O43196 834 aa22.67■■□□□ 1.22
MKLN1-202ENST00000416992 POTEDQ86YR6 584 aa21.38■■□□□ 1.01
MKLN1-202ENST00000416992 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
MKLN1-202ENST00000416992 MAPK8IP2Q13387 824 aaPredicted RBP21.2■□□□□ 0.98
MKLN1-202ENST00000416992 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
MKLN1-202ENST00000416992 PPP4R3CPQ6ZMV5 832 aa21.13■□□□□ 0.97
MKLN1-202ENST00000416992 DNAJC5Q9H3Z4 198 aa21.12■□□□□ 0.97
MKLN1-202ENST00000416992 ABCC9O60706 1549 aa21.04■□□□□ 0.96
MKLN1-202ENST00000416992 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
MKLN1-202ENST00000416992 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
MKLN1-202ENST00000416992 NISCHQ9Y2I1 1504 aa20.59■□□□□ 0.89
MKLN1-202ENST00000416992 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
MKLN1-202ENST00000416992 HOXD11P31277 338 aaPredicted RBP20.39■□□□□ 0.85
MKLN1-202ENST00000416992 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
MKLN1-202ENST00000416992 KCNA4P22459 653 aa20.23■□□□□ 0.83
MKLN1-202ENST00000416992 NPM3O75607 178 aaKnown RBP20.19■□□□□ 0.82
MKLN1-202ENST00000416992 DCAF8L1A6NGE4 600 aa19.93■□□□□ 0.78
MKLN1-202ENST00000416992 RNF39Q9H2S5 420 aa19.45■□□□□ 0.7
MKLN1-202ENST00000416992 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
MKLN1-202ENST00000416992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.32■□□□□ 0.68
MKLN1-202ENST00000416992 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
MKLN1-202ENST00000416992 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
MKLN1-202ENST00000416992 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
MKLN1-202ENST00000416992 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
MKLN1-202ENST00000416992 SLC4A2P04920 1241 aa19.21■□□□□ 0.67
MKLN1-202ENST00000416992 C1QBPQ07021 282 aaKnown RBP19.16■□□□□ 0.66
MKLN1-202ENST00000416992 CACNB1Q02641 598 aaPredicted RBP19.13■□□□□ 0.65
MKLN1-202ENST00000416992 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
MKLN1-202ENST00000416992 U3KPZ7 1027 aaPredicted RBP19.06■□□□□ 0.64
MKLN1-202ENST00000416992 CUX2O14529 1486 aa19.04■□□□□ 0.64
MKLN1-202ENST00000416992 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
MKLN1-202ENST00000416992 UNC13AQ9UPW8 1703 aa18.76■□□□□ 0.59
MKLN1-202ENST00000416992 NACADO15069 1562 aa18.74■□□□□ 0.59
MKLN1-202ENST00000416992 BICRAQ9NZM4 1560 aa18.74■□□□□ 0.59
MKLN1-202ENST00000416992 FOXD4L1Q9NU39 408 aa18.69■□□□□ 0.58
MKLN1-202ENST00000416992 ZBTB22O15209 634 aa18.66■□□□□ 0.58
MKLN1-202ENST00000416992 SPINK5Q9NQ38 1064 aaPredicted RBP18.63■□□□□ 0.57
MKLN1-202ENST00000416992 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
MKLN1-202ENST00000416992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
MKLN1-202ENST00000416992 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
MKLN1-202ENST00000416992 SAMD1Q6SPF0 538 aaPredicted RBP18.53■□□□□ 0.56
MKLN1-202ENST00000416992 CAPN15O75808 1086 aa18.49■□□□□ 0.55
MKLN1-202ENST00000416992 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
MKLN1-202ENST00000416992 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
MKLN1-202ENST00000416992 APLP2Q06481 763 aa18.44■□□□□ 0.54
MKLN1-202ENST00000416992 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
MKLN1-202ENST00000416992 DSG3P32926 999 aa18.37■□□□□ 0.53
MKLN1-202ENST00000416992 ILDR1Q86SU0 546 aaPredicted RBP18.37■□□□□ 0.53
MKLN1-202ENST00000416992 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
MKLN1-202ENST00000416992 ZNF219Q9P2Y4 722 aaPredicted RBP18.31■□□□□ 0.52
MKLN1-202ENST00000416992 ATF5Q9Y2D1 282 aaPredicted RBP18.23■□□□□ 0.51
MKLN1-202ENST00000416992 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
MKLN1-202ENST00000416992 ABCB7O75027 752 aa18.13■□□□□ 0.49
MKLN1-202ENST00000416992 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
MKLN1-202ENST00000416992 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
MKLN1-202ENST00000416992 ATXN8OSP0DMR3 200 aa18.09■□□□□ 0.49
MKLN1-202ENST00000416992 POLA2Q14181 598 aa17.99■□□□□ 0.47
MKLN1-202ENST00000416992 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
MKLN1-202ENST00000416992 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
MKLN1-202ENST00000416992 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
MKLN1-202ENST00000416992 RIMBP3CA6NJZ7 1639 aa17.73■□□□□ 0.43
MKLN1-202ENST00000416992 RIMBP3BA6NNM3 1639 aa17.73■□□□□ 0.43
MKLN1-202ENST00000416992 RIMBP3Q9UFD9 1639 aa17.73■□□□□ 0.43
MKLN1-202ENST00000416992 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
MKLN1-202ENST00000416992 ZBTB12Q9Y330 459 aaPredicted RBP17.6■□□□□ 0.41
MKLN1-202ENST00000416992 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
MKLN1-202ENST00000416992 NESP48681 1621 aa17.51■□□□□ 0.39
MKLN1-202ENST00000416992 ARHGEF11O15085 1522 aa17.51■□□□□ 0.39
MKLN1-202ENST00000416992 CYB5RLQ6IPT4 315 aa17.48■□□□□ 0.39
MKLN1-202ENST00000416992 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
MKLN1-202ENST00000416992 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
MKLN1-202ENST00000416992 RBM42Q9BTD8 480 aaKnown RBP17.42■□□□□ 0.38
MKLN1-202ENST00000416992 SOCS7O14512 581 aa17.35■□□□□ 0.37
MKLN1-202ENST00000416992 FBLN2P98095 1184 aa17.35■□□□□ 0.37
MKLN1-202ENST00000416992 LMTK3Q96Q04 1460 aa17.35■□□□□ 0.37
MKLN1-202ENST00000416992 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
MKLN1-202ENST00000416992 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
MKLN1-202ENST00000416992 FBXO41Q8TF61 875 aa17.24■□□□□ 0.35
MKLN1-202ENST00000416992 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
MKLN1-202ENST00000416992 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
MKLN1-202ENST00000416992 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
MKLN1-202ENST00000416992 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
MKLN1-202ENST00000416992 WDR62O43379 1518 aa17.14■□□□□ 0.33
MKLN1-202ENST00000416992 SPDYE2BA6NHP3 402 aa17.13■□□□□ 0.33
MKLN1-202ENST00000416992 SPDYE6P0CI01 402 aa17.13■□□□□ 0.33
MKLN1-202ENST00000416992 SPDYE2Q495Y8 402 aa17.13■□□□□ 0.33
MKLN1-202ENST00000416992 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
MKLN1-202ENST00000416992 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
MKLN1-202ENST00000416992 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
MKLN1-202ENST00000416992 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
MKLN1-202ENST00000416992 SSUH2Q9Y2M2 353 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms