RNA–Protein interactions for RNA: ENST00000416792.1

SHISA7-202, Transcript of shisa family member 7, humanhuman

APPRIS ALT2 TSL 5

Gene SHISA7, Length 2,321 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7-202ENST00000416792 NISCHQ9Y2I1 1504 aa45.28■■■■■ 4.84
SHISA7-202ENST00000416792 CCDC180Q9P1Z9 1646 aa39.09■■■■□ 3.85
SHISA7-202ENST00000416792 ZCCHC6Q5VYS8 1495 aaKnown RBP38.12■■■■□ 3.69
SHISA7-202ENST00000416792 SHROOM4Q9ULL8 1493 aa37.61■■■■□ 3.61
SHISA7-202ENST00000416792 DCAF8L2P0C7V8 631 aa37.54■■■■□ 3.6
SHISA7-202ENST00000416792 DCAF1Q9Y4B6 1507 aa37.27■■■■□ 3.56
SHISA7-202ENST00000416792 ABCC9O60706 1549 aa36.85■■■■□ 3.49
SHISA7-202ENST00000416792 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
SHISA7-202ENST00000416792 SUPT5HO00267 1087 aaKnown RBP36.4■■■■□ 3.42
SHISA7-202ENST00000416792 NACADO15069 1562 aa36.33■■■■□ 3.41
SHISA7-202ENST00000416792 SCRIBQ14160 1630 aa36.29■■■■□ 3.4
SHISA7-202ENST00000416792 RB1CC1Q8TDY2 1594 aa35.93■■■■□ 3.34
SHISA7-202ENST00000416792 RSF1Q96T23 1441 aaPredicted RBP35.4■■■■□ 3.26
SHISA7-202ENST00000416792 UNC13AQ9UPW8 1703 aa35.38■■■■□ 3.25
SHISA7-202ENST00000416792 CECR2Q9BXF3 1484 aa35.32■■■■□ 3.24
SHISA7-202ENST00000416792 MROH2BQ7Z745 1585 aa35.12■■■■□ 3.21
SHISA7-202ENST00000416792 CHIC1Q5VXU3 224 aa35.01■■■■□ 3.19
SHISA7-202ENST00000416792 BICRAQ9NZM4 1560 aa34.98■■■■□ 3.19
SHISA7-202ENST00000416792 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
SHISA7-202ENST00000416792 WIZO95785 1651 aa34.87■■■■□ 3.17
SHISA7-202ENST00000416792 BAZ1AQ9NRL2 1556 aaPredicted RBP34.86■■■■□ 3.17
SHISA7-202ENST00000416792 SMARCA4P51532 1647 aa34.71■■■■□ 3.15
SHISA7-202ENST00000416792 TOP2AP11388 1531 aaKnown RBP34.37■■■■□ 3.09
SHISA7-202ENST00000416792 PEG3Q9GZU2 1588 aa34.16■■■■□ 3.06
SHISA7-202ENST00000416792 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
SHISA7-202ENST00000416792 SMARCA2P51531 1590 aa34.13■■■■□ 3.05
SHISA7-202ENST00000416792 TRIM41Q8WV44 630 aa34.05■■■■□ 3.04
SHISA7-202ENST00000416792 ATAD2BQ9ULI0 1458 aa34.04■■■■□ 3.04
SHISA7-202ENST00000416792 EIF4G1Q04637 1599 aaKnown RBP34.04■■■■□ 3.04
SHISA7-202ENST00000416792 BAZ1BQ9UIG0 1483 aaKnown RBP33.86■■■■□ 3.01
SHISA7-202ENST00000416792 LOC105371045A0A1W2PR82 267 aa33.85■■■■□ 3.01
SHISA7-202ENST00000416792 ABCC8Q09428 1581 aa33.67■■■□□ 2.98
SHISA7-202ENST00000416792 FAM9AQ8IZU1 332 aaPredicted RBP33.64■■■□□ 2.98
SHISA7-202ENST00000416792 NCAPD3P42695 1498 aa33.59■■■□□ 2.97
SHISA7-202ENST00000416792 HMGXB3Q12766 1538 aa33.53■■■□□ 2.96
SHISA7-202ENST00000416792 EHMT2Q96KQ7 1210 aa33.29■■■□□ 2.92
SHISA7-202ENST00000416792 CC2D2AQ9P2K1 1620 aa33.27■■■□□ 2.92
SHISA7-202ENST00000416792 WRNQ14191 1432 aaPredicted RBP eCLIP33.26■■■□□ 2.92
SHISA7-202ENST00000416792 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
SHISA7-202ENST00000416792 SOGA1O94964 1423 aa33.14■■■□□ 2.9
SHISA7-202ENST00000416792 RUSC2Q8N2Y8 1516 aa33.04■■■□□ 2.88
SHISA7-202ENST00000416792 CFTRP13569 1480 aa33.02■■■□□ 2.88
SHISA7-202ENST00000416792 TOP2BQ02880 1626 aa32.89■■■□□ 2.86
SHISA7-202ENST00000416792 EEA1Q15075 1411 aa32.88■■■□□ 2.85
SHISA7-202ENST00000416792 CSRNP3Q8WYN3 585 aa32.86■■■□□ 2.85
SHISA7-202ENST00000416792 CADPSQ9ULU8 1353 aa32.82■■■□□ 2.85
SHISA7-202ENST00000416792 BIVM-ERCC5R4GMW8 1640 aa32.82■■■□□ 2.84
SHISA7-202ENST00000416792 PRDM2Q13029 1718 aa32.78■■■□□ 2.84
SHISA7-202ENST00000416792 CUX1P39880 1505 aa32.77■■■□□ 2.84
SHISA7-202ENST00000416792 PCGF6Q9BYE7 350 aa32.76■■■□□ 2.83
SHISA7-202ENST00000416792 DNAJC5BQ9UF47 199 aa32.6■■■□□ 2.81
SHISA7-202ENST00000416792 TNIKQ9UKE5 1360 aa32.58■■■□□ 2.81
SHISA7-202ENST00000416792 GOLGA3Q08378 1498 aa32.58■■■□□ 2.81
SHISA7-202ENST00000416792 UBTFP17480 764 aaKnown RBP32.56■■■□□ 2.8
SHISA7-202ENST00000416792 NESP48681 1621 aa32.55■■■□□ 2.8
SHISA7-202ENST00000416792 CEP162Q5TB80 1403 aa32.51■■■□□ 2.8
SHISA7-202ENST00000416792 CEP164Q9UPV0 1460 aa32.51■■■□□ 2.79
SHISA7-202ENST00000416792 KIF21BO75037 1637 aa32.51■■■□□ 2.79
SHISA7-202ENST00000416792 FANCD2Q9BXW9 1451 aa32.49■■■□□ 2.79
SHISA7-202ENST00000416792 TRIM26Q12899 539 aaPredicted RBP32.46■■■□□ 2.79
SHISA7-202ENST00000416792 RAPGEF2Q9Y4G8 1499 aa32.4■■■□□ 2.78
SHISA7-202ENST00000416792 LAMC3Q9Y6N6 1575 aa32.33■■■□□ 2.77
SHISA7-202ENST00000416792 KIF27Q86VH2 1401 aa32.33■■■□□ 2.77
SHISA7-202ENST00000416792 FGD5Q6ZNL6 1462 aa32.32■■■□□ 2.77
SHISA7-202ENST00000416792 PPARGC1BQ86YN6 1023 aaKnown RBP32.31■■■□□ 2.76
SHISA7-202ENST00000416792 PRXQ9BXM0 1461 aa32.27■■■□□ 2.76
SHISA7-202ENST00000416792 CUX2O14529 1486 aa32.22■■■□□ 2.75
SHISA7-202ENST00000416792 DNMBPQ6XZF7 1577 aa32.21■■■□□ 2.75
SHISA7-202ENST00000416792 TOPBP1Q92547 1522 aa32.19■■■□□ 2.74
SHISA7-202ENST00000416792 ERICH3Q5RHP9 1530 aa32.17■■■□□ 2.74
SHISA7-202ENST00000416792 CLIP1P30622 1438 aa32.13■■■□□ 2.73
SHISA7-202ENST00000416792 HRCP23327 699 aa32.11■■■□□ 2.73
SHISA7-202ENST00000416792 PDS5BQ9NTI5 1447 aa32.1■■■□□ 2.73
SHISA7-202ENST00000416792 URB2Q14146 1524 aaKnown RBP32.09■■■□□ 2.73
SHISA7-202ENST00000416792 POLA1P09884 1462 aaPredicted RBP32.09■■■□□ 2.73
SHISA7-202ENST00000416792 RAD54L2Q9Y4B4 1467 aa32.09■■■□□ 2.73
SHISA7-202ENST00000416792 IGF1RP08069 1367 aa32.08■■■□□ 2.73
SHISA7-202ENST00000416792 RANGAP1P46060 587 aaPredicted RBP32.08■■■□□ 2.73
SHISA7-202ENST00000416792 KIF21AQ7Z4S6 1674 aa32.05■■■□□ 2.72
SHISA7-202ENST00000416792 ABCA10Q8WWZ4 1543 aa31.97■■■□□ 2.71
SHISA7-202ENST00000416792 TTBK1Q5TCY1 1321 aaPredicted RBP31.96■■■□□ 2.71
SHISA7-202ENST00000416792 CARMIL1Q5VZK9 1371 aa31.91■■■□□ 2.7
SHISA7-202ENST00000416792 VPS8Q8N3P4 1428 aa31.88■■■□□ 2.69
SHISA7-202ENST00000416792 WDR97A6NE52 1622 aa31.82■■■□□ 2.68
SHISA7-202ENST00000416792 ARAP1Q96P48 1450 aa31.78■■■□□ 2.68
SHISA7-202ENST00000416792 TDRD9Q8NDG6 1382 aaKnown RBP31.74■■■□□ 2.67
SHISA7-202ENST00000416792 MRC2Q9UBG0 1479 aa31.68■■■□□ 2.66
SHISA7-202ENST00000416792 ARHGAP35Q9NRY4 1499 aa31.68■■■□□ 2.66
SHISA7-202ENST00000416792 ABCA5Q8WWZ7 1642 aa31.68■■■□□ 2.66
SHISA7-202ENST00000416792 TARBP1Q13395 1621 aaKnown RBP31.65■■■□□ 2.66
SHISA7-202ENST00000416792 CUL7Q14999 1698 aa31.63■■■□□ 2.65
SHISA7-202ENST00000416792 GAPVD1Q14C86 1478 aa31.62■■■□□ 2.65
SHISA7-202ENST00000416792 APLP2Q06481 763 aa31.58■■■□□ 2.65
SHISA7-202ENST00000416792 WDR62O43379 1518 aa31.48■■■□□ 2.63
SHISA7-202ENST00000416792 AQRO60306 1485 aaKnown RBP eCLIP31.45■■■□□ 2.63
SHISA7-202ENST00000416792 ERCC6Q03468 1493 aa31.45■■■□□ 2.62
SHISA7-202ENST00000416792 CTTNBP2Q8WZ74 1663 aa31.41■■■□□ 2.62
SHISA7-202ENST00000416792 KANK4Q5T7N3 995 aaPredicted RBP31.4■■■□□ 2.62
SHISA7-202ENST00000416792 PBRM1Q86U86 1689 aa31.39■■■□□ 2.62
SHISA7-202ENST00000416792 P3H3Q8IVL6 736 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms