RNA–Protein interactions for RNA: ENST00000416591.5

CAPN10-209, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,514 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-209ENST00000416591 NISCHQ9Y2I1 1504 aa42■■■■■ 4.31
CAPN10-209ENST00000416591 CCDC180Q9P1Z9 1646 aa35.8■■■■□ 3.32
CAPN10-209ENST00000416591 SHROOM4Q9ULL8 1493 aa35.64■■■■□ 3.3
CAPN10-209ENST00000416591 ZCCHC6Q5VYS8 1495 aaKnown RBP35.53■■■■□ 3.28
CAPN10-209ENST00000416591 SUPT5HO00267 1087 aaKnown RBP34.92■■■■□ 3.18
CAPN10-209ENST00000416591 DCAF8L2P0C7V8 631 aa34.7■■■■□ 3.15
CAPN10-209ENST00000416591 DCAF1Q9Y4B6 1507 aa34.52■■■■□ 3.12
CAPN10-209ENST00000416591 CHIC1Q5VXU3 224 aa34.18■■■■□ 3.06
CAPN10-209ENST00000416591 MYO15BQ96JP2 1530 aa34.17■■■■□ 3.06
CAPN10-209ENST00000416591 HRCP23327 699 aa33.96■■■■□ 3.03
CAPN10-209ENST00000416591 PCGF6Q9BYE7 350 aa33.58■■■□□ 2.97
CAPN10-209ENST00000416591 ABCC9O60706 1549 aa33.52■■■□□ 2.96
CAPN10-209ENST00000416591 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
CAPN10-209ENST00000416591 RSF1Q96T23 1441 aaPredicted RBP33.18■■■□□ 2.9
CAPN10-209ENST00000416591 LOC105371045A0A1W2PR82 267 aa33.15■■■□□ 2.9
CAPN10-209ENST00000416591 NACADO15069 1562 aa33.09■■■□□ 2.89
CAPN10-209ENST00000416591 PPARGC1BQ86YN6 1023 aaKnown RBP33.09■■■□□ 2.89
CAPN10-209ENST00000416591 TRIM26Q12899 539 aaPredicted RBP32.9■■■□□ 2.86
CAPN10-209ENST00000416591 RB1CC1Q8TDY2 1594 aa32.84■■■□□ 2.85
CAPN10-209ENST00000416591 CECR2Q9BXF3 1484 aa32.72■■■□□ 2.83
CAPN10-209ENST00000416591 MROH2BQ7Z745 1585 aa32.62■■■□□ 2.81
CAPN10-209ENST00000416591 TRIM41Q8WV44 630 aa32.57■■■□□ 2.81
CAPN10-209ENST00000416591 WIZO95785 1651 aa32.45■■■□□ 2.79
CAPN10-209ENST00000416591 ZEB1P37275 1124 aaPredicted RBP32.45■■■□□ 2.78
CAPN10-209ENST00000416591 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
CAPN10-209ENST00000416591 FAM9AQ8IZU1 332 aaPredicted RBP32.25■■■□□ 2.75
CAPN10-209ENST00000416591 UNC13AQ9UPW8 1703 aa32.07■■■□□ 2.72
CAPN10-209ENST00000416591 EIF4G1Q04637 1599 aaKnown RBP32.03■■■□□ 2.72
CAPN10-209ENST00000416591 SMARCA4P51532 1647 aa32.01■■■□□ 2.72
CAPN10-209ENST00000416591 TOP2AP11388 1531 aaKnown RBP31.98■■■□□ 2.71
CAPN10-209ENST00000416591 EHMT2Q96KQ7 1210 aa31.92■■■□□ 2.7
CAPN10-209ENST00000416591 CCDC88BA6NC98 1476 aa31.81■■■□□ 2.68
CAPN10-209ENST00000416591 SMARCA2P51531 1590 aa31.79■■■□□ 2.68
CAPN10-209ENST00000416591 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
CAPN10-209ENST00000416591 BICRAQ9NZM4 1560 aa31.66■■■□□ 2.66
CAPN10-209ENST00000416591 PABPN1Q86U42 306 aaKnown RBP eCLIP31.6■■■□□ 2.65
CAPN10-209ENST00000416591 PELP1Q8IZL8 1130 aaKnown RBP31.59■■■□□ 2.65
CAPN10-209ENST00000416591 SCAF1Q9H7N4 1312 aaKnown RBP31.54■■■□□ 2.64
CAPN10-209ENST00000416591 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
CAPN10-209ENST00000416591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.42■■■□□ 2.62
CAPN10-209ENST00000416591 CCER1Q8TC90 406 aaPredicted RBP31.42■■■□□ 2.62
CAPN10-209ENST00000416591 SOGA1O94964 1423 aa31.36■■■□□ 2.61
CAPN10-209ENST00000416591 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.61
CAPN10-209ENST00000416591 EEA1Q15075 1411 aa31.27■■■□□ 2.6
CAPN10-209ENST00000416591 CEP162Q5TB80 1403 aa31.21■■■□□ 2.59
CAPN10-209ENST00000416591 RUSC2Q8N2Y8 1516 aa31.2■■■□□ 2.59
CAPN10-209ENST00000416591 TNIKQ9UKE5 1360 aa31.19■■■□□ 2.58
CAPN10-209ENST00000416591 ATAD2BQ9ULI0 1458 aa31.19■■■□□ 2.58
CAPN10-209ENST00000416591 CSRNP3Q8WYN3 585 aa31.19■■■□□ 2.58
CAPN10-209ENST00000416591 ACIN1Q9UKV3 1341 aaKnown RBP31.14■■■□□ 2.58
CAPN10-209ENST00000416591 BAZ1BQ9UIG0 1483 aaKnown RBP31.1■■■□□ 2.57
CAPN10-209ENST00000416591 DIEXFQ68CQ4 756 aaKnown RBP31.07■■■□□ 2.56
CAPN10-209ENST00000416591 SYNJ1O43426 1573 aa31.04■■■□□ 2.56
CAPN10-209ENST00000416591 GOLGA3Q08378 1498 aa31.03■■■□□ 2.56
CAPN10-209ENST00000416591 UBTFP17480 764 aaKnown RBP31.03■■■□□ 2.56
CAPN10-209ENST00000416591 NEUROD1Q13562 356 aa31.01■■■□□ 2.55
CAPN10-209ENST00000416591 TTBK1Q5TCY1 1321 aaPredicted RBP31■■■□□ 2.55
CAPN10-209ENST00000416591 CENPBP07199 599 aaPredicted RBP30.94■■■□□ 2.54
CAPN10-209ENST00000416591 CEP164Q9UPV0 1460 aa30.86■■■□□ 2.53
CAPN10-209ENST00000416591 KIF21BO75037 1637 aa30.85■■■□□ 2.53
CAPN10-209ENST00000416591 GTF3C3Q9Y5Q9 886 aa30.76■■■□□ 2.51
CAPN10-209ENST00000416591 ZNF316A6NFI3 1004 aaPredicted RBP30.74■■■□□ 2.51
CAPN10-209ENST00000416591 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
CAPN10-209ENST00000416591 CLIP1P30622 1438 aa30.65■■■□□ 2.5
CAPN10-209ENST00000416591 HMGXB3Q12766 1538 aa30.62■■■□□ 2.49
CAPN10-209ENST00000416591 RAPGEF2Q9Y4G8 1499 aa30.62■■■□□ 2.49
CAPN10-209ENST00000416591 NCAPD3P42695 1498 aa30.6■■■□□ 2.49
CAPN10-209ENST00000416591 BIVM-ERCC5R4GMW8 1640 aa30.6■■■□□ 2.49
CAPN10-209ENST00000416591 VPS8Q8N3P4 1428 aa30.52■■■□□ 2.48
CAPN10-209ENST00000416591 HNRNPUL2Q1KMD3 747 aaKnown RBP30.46■■■□□ 2.47
CAPN10-209ENST00000416591 CUX1P39880 1505 aa30.39■■■□□ 2.46
CAPN10-209ENST00000416591 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
CAPN10-209ENST00000416591 RANGAP1P46060 587 aaPredicted RBP30.37■■■□□ 2.45
CAPN10-209ENST00000416591 APLP2Q06481 763 aa30.36■■■□□ 2.45
CAPN10-209ENST00000416591 PRXQ9BXM0 1461 aa30.36■■■□□ 2.45
CAPN10-209ENST00000416591 CFTRP13569 1480 aa30.34■■■□□ 2.45
CAPN10-209ENST00000416591 YTHDC1Q96MU7 727 aaKnown RBP30.31■■■□□ 2.44
CAPN10-209ENST00000416591 MIER1Q8N108 512 aa30.31■■■□□ 2.44
CAPN10-209ENST00000416591 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
CAPN10-209ENST00000416591 ARAP1Q96P48 1450 aa30.17■■■□□ 2.42
CAPN10-209ENST00000416591 MYT1Q01538 1121 aa30.16■■■□□ 2.42
CAPN10-209ENST00000416591 PRDM2Q13029 1718 aa30.15■■■□□ 2.42
CAPN10-209ENST00000416591 CLSPNQ9HAW4 1339 aa30.11■■■□□ 2.41
CAPN10-209ENST00000416591 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
CAPN10-209ENST00000416591 DHX57Q6P158 1386 aaKnown RBP29.99■■■□□ 2.39
CAPN10-209ENST00000416591 KANK4Q5T7N3 995 aaPredicted RBP29.95■■■□□ 2.39
CAPN10-209ENST00000416591 CUX2O14529 1486 aa29.94■■■□□ 2.38
CAPN10-209ENST00000416591 ARHGAP35Q9NRY4 1499 aa29.93■■■□□ 2.38
CAPN10-209ENST00000416591 IGF1RP08069 1367 aa29.89■■■□□ 2.38
CAPN10-209ENST00000416591 FGD5Q6ZNL6 1462 aa29.86■■■□□ 2.37
CAPN10-209ENST00000416591 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
CAPN10-209ENST00000416591 RRBP1Q9P2E9 1410 aaKnown RBP29.84■■■□□ 2.37
CAPN10-209ENST00000416591 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
CAPN10-209ENST00000416591 FANCD2Q9BXW9 1451 aa29.71■■■□□ 2.35
CAPN10-209ENST00000416591 CCNB3Q8WWL7 1395 aa29.68■■■□□ 2.34
CAPN10-209ENST00000416591 TIAM1Q13009 1591 aa29.61■■■□□ 2.33
CAPN10-209ENST00000416591 MAP3K1Q13233 1512 aa29.6■■■□□ 2.33
CAPN10-209ENST00000416591 DNMBPQ6XZF7 1577 aa29.59■■■□□ 2.33
CAPN10-209ENST00000416591 SUPT16HQ9Y5B9 1047 aaKnown RBP29.54■■■□□ 2.32
CAPN10-209ENST00000416591 RAD54L2Q9Y4B4 1467 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms