RNA–Protein interactions for RNA: ENST00000416476.6

BBX-207, Transcript of BBX, HMG-box containing, humanhuman

TSL 1 (best) BASIC

Gene BBX, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-207ENST00000416476 NISCHQ9Y2I1 1504 aa16.41■□□□□ 0.22
BBX-207ENST00000416476 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
BBX-207ENST00000416476 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
BBX-207ENST00000416476 CCDC180Q9P1Z9 1646 aa14.05□□□□□ -0.16
BBX-207ENST00000416476 ZCCHC6Q5VYS8 1495 aaKnown RBP13.86□□□□□ -0.19
BBX-207ENST00000416476 PHF23Q9BUL5 403 aaPredicted RBP13.85□□□□□ -0.19
BBX-207ENST00000416476 SHROOM4Q9ULL8 1493 aa13.77□□□□□ -0.21
BBX-207ENST00000416476 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
BBX-207ENST00000416476 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
BBX-207ENST00000416476 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
BBX-207ENST00000416476 MYO15BQ96JP2 1530 aa13.21□□□□□ -0.29
BBX-207ENST00000416476 SCRIBQ14160 1630 aa13.04□□□□□ -0.32
BBX-207ENST00000416476 ABCC9O60706 1549 aa13.03□□□□□ -0.32
BBX-207ENST00000416476 NACADO15069 1562 aa13.03□□□□□ -0.32
BBX-207ENST00000416476 RSF1Q96T23 1441 aaPredicted RBP12.92□□□□□ -0.34
BBX-207ENST00000416476 PLPPR3Q6T4P5 718 aa12.86□□□□□ -0.35
BBX-207ENST00000416476 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
BBX-207ENST00000416476 CECR2Q9BXF3 1484 aa12.74□□□□□ -0.37
BBX-207ENST00000416476 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.37
BBX-207ENST00000416476 MROH2BQ7Z745 1585 aa12.71□□□□□ -0.38
BBX-207ENST00000416476 LOC105371045A0A1W2PR82 267 aa12.64□□□□□ -0.39
BBX-207ENST00000416476 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
BBX-207ENST00000416476 BAZ1AQ9NRL2 1556 aaPredicted RBP12.63□□□□□ -0.39
BBX-207ENST00000416476 WIZO95785 1651 aa12.61□□□□□ -0.39
BBX-207ENST00000416476 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
BBX-207ENST00000416476 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
BBX-207ENST00000416476 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
BBX-207ENST00000416476 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
BBX-207ENST00000416476 HRCP23327 699 aa12.47□□□□□ -0.41
BBX-207ENST00000416476 FAM9AQ8IZU1 332 aaPredicted RBP12.43□□□□□ -0.42
BBX-207ENST00000416476 BICRAQ9NZM4 1560 aa12.42□□□□□ -0.42
BBX-207ENST00000416476 EIF4G1Q04637 1599 aaKnown RBP12.41□□□□□ -0.42
BBX-207ENST00000416476 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
BBX-207ENST00000416476 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
BBX-207ENST00000416476 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
BBX-207ENST00000416476 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
BBX-207ENST00000416476 PEG3Q9GZU2 1588 aa12.32□□□□□ -0.44
BBX-207ENST00000416476 ABCC8Q09428 1581 aa12.27□□□□□ -0.45
BBX-207ENST00000416476 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
BBX-207ENST00000416476 ADRA2BP18089 450 aa12.25□□□□□ -0.45
BBX-207ENST00000416476 ATAD2BQ9ULI0 1458 aa12.23□□□□□ -0.45
BBX-207ENST00000416476 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
BBX-207ENST00000416476 EEA1Q15075 1411 aa12.19□□□□□ -0.46
BBX-207ENST00000416476 SOGA1O94964 1423 aa12.15□□□□□ -0.46
BBX-207ENST00000416476 WRNQ14191 1432 aaPredicted RBP eCLIP12.15□□□□□ -0.46
BBX-207ENST00000416476 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
BBX-207ENST00000416476 PPARGC1BQ86YN6 1023 aaKnown RBP12.13□□□□□ -0.47
BBX-207ENST00000416476 ZEB1P37275 1124 aaPredicted RBP12.12□□□□□ -0.47
BBX-207ENST00000416476 KCNA4P22459 653 aa12.11□□□□□ -0.47
BBX-207ENST00000416476 TNIKQ9UKE5 1360 aa12.1□□□□□ -0.47
BBX-207ENST00000416476 RUSC2Q8N2Y8 1516 aa12.07□□□□□ -0.48
BBX-207ENST00000416476 CEP162Q5TB80 1403 aa12.07□□□□□ -0.48
BBX-207ENST00000416476 NCAPD3P42695 1498 aa12.05□□□□□ -0.48
BBX-207ENST00000416476 GOLGA3Q08378 1498 aa12.05□□□□□ -0.48
BBX-207ENST00000416476 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
BBX-207ENST00000416476 UBTFP17480 764 aaKnown RBP12.04□□□□□ -0.48
BBX-207ENST00000416476 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
BBX-207ENST00000416476 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.48
BBX-207ENST00000416476 CEP164Q9UPV0 1460 aa12□□□□□ -0.49
BBX-207ENST00000416476 KIF21BO75037 1637 aa11.97□□□□□ -0.49
BBX-207ENST00000416476 TOP2BQ02880 1626 aa11.96□□□□□ -0.49
BBX-207ENST00000416476 BIVM-ERCC5R4GMW8 1640 aa11.92□□□□□ -0.5
BBX-207ENST00000416476 CFTRP13569 1480 aa11.9□□□□□ -0.5
BBX-207ENST00000416476 CLIP1P30622 1438 aa11.89□□□□□ -0.51
BBX-207ENST00000416476 RAPGEF2Q9Y4G8 1499 aa11.87□□□□□ -0.51
BBX-207ENST00000416476 FOXD1Q16676 465 aa11.85□□□□□ -0.51
BBX-207ENST00000416476 CCER1Q8TC90 406 aaPredicted RBP11.85□□□□□ -0.51
BBX-207ENST00000416476 TTBK1Q5TCY1 1321 aaPredicted RBP11.85□□□□□ -0.51
BBX-207ENST00000416476 CUX1P39880 1505 aa11.85□□□□□ -0.51
BBX-207ENST00000416476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
BBX-207ENST00000416476 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
BBX-207ENST00000416476 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.52
BBX-207ENST00000416476 PRXQ9BXM0 1461 aa11.82□□□□□ -0.52
BBX-207ENST00000416476 KIF27Q86VH2 1401 aa11.82□□□□□ -0.52
BBX-207ENST00000416476 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
BBX-207ENST00000416476 APLP2Q06481 763 aa11.79□□□□□ -0.52
BBX-207ENST00000416476 PRDM2Q13029 1718 aa11.77□□□□□ -0.52
BBX-207ENST00000416476 CC2D2AQ9P2K1 1620 aa11.75□□□□□ -0.53
BBX-207ENST00000416476 RANGAP1P46060 587 aaPredicted RBP11.74□□□□□ -0.53
BBX-207ENST00000416476 CUX2O14529 1486 aa11.69□□□□□ -0.54
BBX-207ENST00000416476 ARAP1Q96P48 1450 aa11.69□□□□□ -0.54
BBX-207ENST00000416476 IGF1RP08069 1367 aa11.68□□□□□ -0.54
BBX-207ENST00000416476 FGD5Q6ZNL6 1462 aa11.66□□□□□ -0.54
BBX-207ENST00000416476 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
BBX-207ENST00000416476 FANCD2Q9BXW9 1451 aa11.66□□□□□ -0.54
BBX-207ENST00000416476 CARMIL1Q5VZK9 1371 aa11.63□□□□□ -0.55
BBX-207ENST00000416476 ARHGAP35Q9NRY4 1499 aa11.61□□□□□ -0.55
BBX-207ENST00000416476 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
BBX-207ENST00000416476 KANK4Q5T7N3 995 aaPredicted RBP11.58□□□□□ -0.56
BBX-207ENST00000416476 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
BBX-207ENST00000416476 TOPBP1Q92547 1522 aa11.57□□□□□ -0.56
BBX-207ENST00000416476 ABCA10Q8WWZ4 1543 aa11.56□□□□□ -0.56
BBX-207ENST00000416476 NESP48681 1621 aa11.55□□□□□ -0.56
BBX-207ENST00000416476 DIEXFQ68CQ4 756 aaKnown RBP11.55□□□□□ -0.56
BBX-207ENST00000416476 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
BBX-207ENST00000416476 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
BBX-207ENST00000416476 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
BBX-207ENST00000416476 RAD54L2Q9Y4B4 1467 aa11.53□□□□□ -0.56
BBX-207ENST00000416476 MAP3K1Q13233 1512 aa11.52□□□□□ -0.56
BBX-207ENST00000416476 ZNF316A6NFI3 1004 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms