RNA–Protein interactions for RNA: ENST00000415455.5

MUC4-206, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-206ENST00000415455 NISCHQ9Y2I1 1504 aa22.55■■□□□ 1.2
MUC4-206ENST00000415455 DCAF8L2P0C7V8 631 aa20.41■□□□□ 0.86
MUC4-206ENST00000415455 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.77
MUC4-206ENST00000415455 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
MUC4-206ENST00000415455 ABCC9O60706 1549 aa19.04■□□□□ 0.64
MUC4-206ENST00000415455 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
MUC4-206ENST00000415455 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
MUC4-206ENST00000415455 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
MUC4-206ENST00000415455 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
MUC4-206ENST00000415455 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
MUC4-206ENST00000415455 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
MUC4-206ENST00000415455 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
MUC4-206ENST00000415455 NACADO15069 1562 aa18.04■□□□□ 0.48
MUC4-206ENST00000415455 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.48
MUC4-206ENST00000415455 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
MUC4-206ENST00000415455 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
MUC4-206ENST00000415455 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
MUC4-206ENST00000415455 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
MUC4-206ENST00000415455 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
MUC4-206ENST00000415455 MYO15BQ96JP2 1530 aa17.76■□□□□ 0.43
MUC4-206ENST00000415455 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
MUC4-206ENST00000415455 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
MUC4-206ENST00000415455 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.41
MUC4-206ENST00000415455 RANGAP1P46060 587 aaPredicted RBP17.54■□□□□ 0.4
MUC4-206ENST00000415455 PPARGC1BQ86YN6 1023 aaKnown RBP17.48■□□□□ 0.39
MUC4-206ENST00000415455 BAZ1AQ9NRL2 1556 aaPredicted RBP17.43■□□□□ 0.38
MUC4-206ENST00000415455 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
MUC4-206ENST00000415455 WIZO95785 1651 aa17.39■□□□□ 0.37
MUC4-206ENST00000415455 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
MUC4-206ENST00000415455 SMARCA4P51532 1647 aa17.2■□□□□ 0.34
MUC4-206ENST00000415455 HRCP23327 699 aa17.19■□□□□ 0.34
MUC4-206ENST00000415455 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
MUC4-206ENST00000415455 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
MUC4-206ENST00000415455 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
MUC4-206ENST00000415455 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
MUC4-206ENST00000415455 APLP2Q06481 763 aa17.07■□□□□ 0.32
MUC4-206ENST00000415455 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
MUC4-206ENST00000415455 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
MUC4-206ENST00000415455 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
MUC4-206ENST00000415455 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
MUC4-206ENST00000415455 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
MUC4-206ENST00000415455 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
MUC4-206ENST00000415455 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
MUC4-206ENST00000415455 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
MUC4-206ENST00000415455 EIF4G1Q04637 1599 aaKnown RBP16.92■□□□□ 0.3
MUC4-206ENST00000415455 SOGA1O94964 1423 aa16.89■□□□□ 0.29
MUC4-206ENST00000415455 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
MUC4-206ENST00000415455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
MUC4-206ENST00000415455 NCAPD3P42695 1498 aa16.77■□□□□ 0.28
MUC4-206ENST00000415455 P3H3Q8IVL6 736 aa16.77■□□□□ 0.27
MUC4-206ENST00000415455 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
MUC4-206ENST00000415455 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
MUC4-206ENST00000415455 ZEB1P37275 1124 aaPredicted RBP16.7■□□□□ 0.26
MUC4-206ENST00000415455 FBLN2P98095 1184 aa16.69■□□□□ 0.26
MUC4-206ENST00000415455 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
MUC4-206ENST00000415455 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
MUC4-206ENST00000415455 ITGAEP38570 1179 aa16.66■□□□□ 0.26
MUC4-206ENST00000415455 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
MUC4-206ENST00000415455 EEA1Q15075 1411 aa16.58■□□□□ 0.25
MUC4-206ENST00000415455 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.25
MUC4-206ENST00000415455 NESP48681 1621 aa16.57■□□□□ 0.24
MUC4-206ENST00000415455 PEG3Q9GZU2 1588 aa16.57■□□□□ 0.24
MUC4-206ENST00000415455 KIF27Q86VH2 1401 aa16.57■□□□□ 0.24
MUC4-206ENST00000415455 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
MUC4-206ENST00000415455 CUX2O14529 1486 aa16.55■□□□□ 0.24
MUC4-206ENST00000415455 GOLGA3Q08378 1498 aa16.55■□□□□ 0.24
MUC4-206ENST00000415455 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
MUC4-206ENST00000415455 CLIP1P30622 1438 aa16.52■□□□□ 0.24
MUC4-206ENST00000415455 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
MUC4-206ENST00000415455 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
MUC4-206ENST00000415455 SYNJ1O43426 1573 aa16.5■□□□□ 0.23
MUC4-206ENST00000415455 CFTRP13569 1480 aa16.5■□□□□ 0.23
MUC4-206ENST00000415455 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
MUC4-206ENST00000415455 CEP164Q9UPV0 1460 aa16.49■□□□□ 0.23
MUC4-206ENST00000415455 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
MUC4-206ENST00000415455 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
MUC4-206ENST00000415455 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
MUC4-206ENST00000415455 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
MUC4-206ENST00000415455 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
MUC4-206ENST00000415455 FAM50AQ14320 339 aaKnown RBP16.39■□□□□ 0.21
MUC4-206ENST00000415455 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
MUC4-206ENST00000415455 CUX1P39880 1505 aa16.36■□□□□ 0.21
MUC4-206ENST00000415455 CHMP7Q8WUX9 453 aaPredicted RBP16.34■□□□□ 0.21
MUC4-206ENST00000415455 IGF1RP08069 1367 aa16.29■□□□□ 0.2
MUC4-206ENST00000415455 CENPBP07199 599 aaPredicted RBP16.28■□□□□ 0.2
MUC4-206ENST00000415455 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
MUC4-206ENST00000415455 TOP2BQ02880 1626 aa16.27■□□□□ 0.19
MUC4-206ENST00000415455 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
MUC4-206ENST00000415455 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
MUC4-206ENST00000415455 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
MUC4-206ENST00000415455 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.18
MUC4-206ENST00000415455 VPS8Q8N3P4 1428 aa16.17■□□□□ 0.18
MUC4-206ENST00000415455 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
MUC4-206ENST00000415455 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
MUC4-206ENST00000415455 FHOD3Q2V2M9 1422 aa16.09■□□□□ 0.17
MUC4-206ENST00000415455 PRXQ9BXM0 1461 aa16.09■□□□□ 0.17
MUC4-206ENST00000415455 ZNF777Q9ULD5 760 aaPredicted RBP16.09■□□□□ 0.17
MUC4-206ENST00000415455 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
MUC4-206ENST00000415455 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.17
MUC4-206ENST00000415455 LAMC3Q9Y6N6 1575 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms