RNA–Protein interactions for RNA: ENST00000413945.5

LINC00472-201, long intergenic non-protein coding RNA 472, humanhuman

TSL 3

Gene LINC00472, Length 662 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-201ENST00000413945 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
LINC00472-201ENST00000413945 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
LINC00472-201ENST00000413945 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
LINC00472-201ENST00000413945 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
LINC00472-201ENST00000413945 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
LINC00472-201ENST00000413945 FOXD1Q16676 465 aa18.11■□□□□ 0.49
LINC00472-201ENST00000413945 MSH5O43196 834 aa17.13■□□□□ 0.33
LINC00472-201ENST00000413945 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
LINC00472-201ENST00000413945 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
LINC00472-201ENST00000413945 ADRA2BP18089 450 aa16.22■□□□□ 0.19
LINC00472-201ENST00000413945 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
LINC00472-201ENST00000413945 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
LINC00472-201ENST00000413945 ABCC9O60706 1549 aa15.3■□□□□ 0.04
LINC00472-201ENST00000413945 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
LINC00472-201ENST00000413945 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
LINC00472-201ENST00000413945 MAPK8IP2Q13387 824 aaPredicted RBP15.18■□□□□ 0.02
LINC00472-201ENST00000413945 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
LINC00472-201ENST00000413945 NISCHQ9Y2I1 1504 aa15.07■□□□□ 0
LINC00472-201ENST00000413945 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
LINC00472-201ENST00000413945 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
LINC00472-201ENST00000413945 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
LINC00472-201ENST00000413945 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
LINC00472-201ENST00000413945 C1QBPQ07021 282 aaKnown RBP14.3□□□□□ -0.12
LINC00472-201ENST00000413945 CCDC180Q9P1Z9 1646 aa14.13□□□□□ -0.15
LINC00472-201ENST00000413945 POTEHQ6S545 545 aa14.08□□□□□ -0.16
LINC00472-201ENST00000413945 RB1CC1Q8TDY2 1594 aa14.03□□□□□ -0.16
LINC00472-201ENST00000413945 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC00472-201ENST00000413945 CECR2Q9BXF3 1484 aa13.95□□□□□ -0.18
LINC00472-201ENST00000413945 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
LINC00472-201ENST00000413945 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
LINC00472-201ENST00000413945 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
LINC00472-201ENST00000413945 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
LINC00472-201ENST00000413945 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
LINC00472-201ENST00000413945 CUX2O14529 1486 aa13.8□□□□□ -0.2
LINC00472-201ENST00000413945 BICRAQ9NZM4 1560 aa13.76□□□□□ -0.21
LINC00472-201ENST00000413945 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
LINC00472-201ENST00000413945 NACADO15069 1562 aa13.65□□□□□ -0.22
LINC00472-201ENST00000413945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00472-201ENST00000413945 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
LINC00472-201ENST00000413945 SHROOM4Q9ULL8 1493 aa13.45□□□□□ -0.26
LINC00472-201ENST00000413945 DSG3P32926 999 aa13.43□□□□□ -0.26
LINC00472-201ENST00000413945 SPINK5Q9NQ38 1064 aaPredicted RBP13.33□□□□□ -0.28
LINC00472-201ENST00000413945 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
LINC00472-201ENST00000413945 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
LINC00472-201ENST00000413945 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
LINC00472-201ENST00000413945 CAPN15O75808 1086 aa13.24□□□□□ -0.29
LINC00472-201ENST00000413945 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
LINC00472-201ENST00000413945 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
LINC00472-201ENST00000413945 DCAF8L2P0C7V8 631 aa13.01□□□□□ -0.33
LINC00472-201ENST00000413945 THOC2Q8NI27 1593 aaKnown RBP13.01□□□□□ -0.33
LINC00472-201ENST00000413945 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
LINC00472-201ENST00000413945 ABCB7O75027 752 aa12.92□□□□□ -0.34
LINC00472-201ENST00000413945 RIMBP3CA6NJZ7 1639 aa12.91□□□□□ -0.34
LINC00472-201ENST00000413945 RIMBP3BA6NNM3 1639 aa12.91□□□□□ -0.34
LINC00472-201ENST00000413945 RIMBP3Q9UFD9 1639 aa12.91□□□□□ -0.34
LINC00472-201ENST00000413945 BAZ1AQ9NRL2 1556 aaPredicted RBP12.87□□□□□ -0.35
LINC00472-201ENST00000413945 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
LINC00472-201ENST00000413945 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
LINC00472-201ENST00000413945 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
LINC00472-201ENST00000413945 NESP48681 1621 aa12.8□□□□□ -0.36
LINC00472-201ENST00000413945 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
LINC00472-201ENST00000413945 SCRIBQ14160 1630 aa12.77□□□□□ -0.36
LINC00472-201ENST00000413945 ARHGEF11O15085 1522 aa12.74□□□□□ -0.37
LINC00472-201ENST00000413945 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
LINC00472-201ENST00000413945 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
LINC00472-201ENST00000413945 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
LINC00472-201ENST00000413945 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
LINC00472-201ENST00000413945 NCAPD3P42695 1498 aa12.64□□□□□ -0.39
LINC00472-201ENST00000413945 KIF21AQ7Z4S6 1674 aa12.61□□□□□ -0.39
LINC00472-201ENST00000413945 CYB5RLQ6IPT4 315 aa12.6□□□□□ -0.39
LINC00472-201ENST00000413945 APLP2Q06481 763 aa12.58□□□□□ -0.4
LINC00472-201ENST00000413945 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
LINC00472-201ENST00000413945 LAMC3Q9Y6N6 1575 aa12.53□□□□□ -0.4
LINC00472-201ENST00000413945 WDR62O43379 1518 aa12.52□□□□□ -0.4
LINC00472-201ENST00000413945 SOCS7O14512 581 aa12.47□□□□□ -0.41
LINC00472-201ENST00000413945 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.41
LINC00472-201ENST00000413945 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.42
LINC00472-201ENST00000413945 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
LINC00472-201ENST00000413945 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
LINC00472-201ENST00000413945 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
LINC00472-201ENST00000413945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
LINC00472-201ENST00000413945 HNRNPUL2Q1KMD3 747 aaKnown RBP12.42□□□□□ -0.42
LINC00472-201ENST00000413945 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
LINC00472-201ENST00000413945 ATAD2BQ9ULI0 1458 aa12.39□□□□□ -0.43
LINC00472-201ENST00000413945 FBXO41Q8TF61 875 aa12.38□□□□□ -0.43
LINC00472-201ENST00000413945 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
LINC00472-201ENST00000413945 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
LINC00472-201ENST00000413945 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
LINC00472-201ENST00000413945 POLA2Q14181 598 aa12.34□□□□□ -0.43
LINC00472-201ENST00000413945 HAX1O00165 279 aa12.32□□□□□ -0.44
LINC00472-201ENST00000413945 ILDR2Q71H61 639 aa12.32□□□□□ -0.44
LINC00472-201ENST00000413945 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
LINC00472-201ENST00000413945 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
LINC00472-201ENST00000413945 EVX2Q03828 476 aa12.27□□□□□ -0.45
LINC00472-201ENST00000413945 ZCCHC6Q5VYS8 1495 aaKnown RBP12.23□□□□□ -0.45
LINC00472-201ENST00000413945 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
LINC00472-201ENST00000413945 HECW2Q9P2P5 1572 aa12.2□□□□□ -0.46
LINC00472-201ENST00000413945 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00472-201ENST00000413945 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
LINC00472-201ENST00000413945 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms