RNA–Protein interactions for RNA: ENST00000413824.2

AC004022.2-201, humanhuman

BASIC

Gene AC004022.2, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004022.2-201ENST00000413824 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
AC004022.2-201ENST00000413824 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
AC004022.2-201ENST00000413824 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
AC004022.2-201ENST00000413824 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
AC004022.2-201ENST00000413824 FOXD1Q16676 465 aa21.66■■□□□ 1.06
AC004022.2-201ENST00000413824 PLPPR3Q6T4P5 718 aa20.95■□□□□ 0.94
AC004022.2-201ENST00000413824 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
AC004022.2-201ENST00000413824 ADRA2BP18089 450 aa20.33■□□□□ 0.85
AC004022.2-201ENST00000413824 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
AC004022.2-201ENST00000413824 MSH5O43196 834 aa20.21■□□□□ 0.83
AC004022.2-201ENST00000413824 POTEDQ86YR6 584 aa19.39■□□□□ 0.69
AC004022.2-201ENST00000413824 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
AC004022.2-201ENST00000413824 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
AC004022.2-201ENST00000413824 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
AC004022.2-201ENST00000413824 PPP4R3CPQ6ZMV5 832 aa18.38■□□□□ 0.53
AC004022.2-201ENST00000413824 CNKSR2Q8WXI2 1034 aa18.01■□□□□ 0.47
AC004022.2-201ENST00000413824 HOXD11P31277 338 aaPredicted RBP17.89■□□□□ 0.45
AC004022.2-201ENST00000413824 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
AC004022.2-201ENST00000413824 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
AC004022.2-201ENST00000413824 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
AC004022.2-201ENST00000413824 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
AC004022.2-201ENST00000413824 KCNA4P22459 653 aa17.31■□□□□ 0.36
AC004022.2-201ENST00000413824 RNF39Q9H2S5 420 aa17.27■□□□□ 0.36
AC004022.2-201ENST00000413824 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
AC004022.2-201ENST00000413824 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
AC004022.2-201ENST00000413824 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
AC004022.2-201ENST00000413824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
AC004022.2-201ENST00000413824 U3KPZ7 1027 aaPredicted RBP16.7■□□□□ 0.26
AC004022.2-201ENST00000413824 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
AC004022.2-201ENST00000413824 SPINK5Q9NQ38 1064 aaPredicted RBP16.38■□□□□ 0.21
AC004022.2-201ENST00000413824 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
AC004022.2-201ENST00000413824 CAPN15O75808 1086 aa16.33■□□□□ 0.2
AC004022.2-201ENST00000413824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
AC004022.2-201ENST00000413824 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
AC004022.2-201ENST00000413824 APLP2Q06481 763 aa16.25■□□□□ 0.19
AC004022.2-201ENST00000413824 DSG3P32926 999 aa16.23■□□□□ 0.19
AC004022.2-201ENST00000413824 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
AC004022.2-201ENST00000413824 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
AC004022.2-201ENST00000413824 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
AC004022.2-201ENST00000413824 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
AC004022.2-201ENST00000413824 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
AC004022.2-201ENST00000413824 ABCB7O75027 752 aa15.96■□□□□ 0.15
AC004022.2-201ENST00000413824 ZBTB22O15209 634 aa15.93■□□□□ 0.14
AC004022.2-201ENST00000413824 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
AC004022.2-201ENST00000413824 POLA2Q14181 598 aa15.74■□□□□ 0.11
AC004022.2-201ENST00000413824 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
AC004022.2-201ENST00000413824 RBM42Q9BTD8 480 aaKnown RBP15.47■□□□□ 0.07
AC004022.2-201ENST00000413824 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
AC004022.2-201ENST00000413824 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
AC004022.2-201ENST00000413824 POTEHQ6S545 545 aa15.23■□□□□ 0.03
AC004022.2-201ENST00000413824 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
AC004022.2-201ENST00000413824 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
AC004022.2-201ENST00000413824 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
AC004022.2-201ENST00000413824 FBLN2P98095 1184 aa15.14■□□□□ 0.01
AC004022.2-201ENST00000413824 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
AC004022.2-201ENST00000413824 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
AC004022.2-201ENST00000413824 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
AC004022.2-201ENST00000413824 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
AC004022.2-201ENST00000413824 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
AC004022.2-201ENST00000413824 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
AC004022.2-201ENST00000413824 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
AC004022.2-201ENST00000413824 ZNF692Q9BU19 519 aaPredicted RBP14.82□□□□□ -0.04
AC004022.2-201ENST00000413824 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
AC004022.2-201ENST00000413824 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
AC004022.2-201ENST00000413824 FXR2P51116 673 aaKnown RBP eCLIP14.7□□□□□ -0.06
AC004022.2-201ENST00000413824 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
AC004022.2-201ENST00000413824 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
AC004022.2-201ENST00000413824 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
AC004022.2-201ENST00000413824 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
AC004022.2-201ENST00000413824 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
AC004022.2-201ENST00000413824 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
AC004022.2-201ENST00000413824 HAX1O00165 279 aa14.39□□□□□ -0.11
AC004022.2-201ENST00000413824 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
AC004022.2-201ENST00000413824 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
AC004022.2-201ENST00000413824 STAG3Q9UJ98 1225 aa14.26□□□□□ -0.13
AC004022.2-201ENST00000413824 EVX2Q03828 476 aa14.25□□□□□ -0.13
AC004022.2-201ENST00000413824 C19orf67A6NJJ6 358 aa14.22□□□□□ -0.13
AC004022.2-201ENST00000413824 PROM2Q8N271 834 aa14.16□□□□□ -0.14
AC004022.2-201ENST00000413824 FARP1Q9Y4F1 1045 aaPredicted RBP14.15□□□□□ -0.14
AC004022.2-201ENST00000413824 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
AC004022.2-201ENST00000413824 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
AC004022.2-201ENST00000413824 GABBR2O75899 941 aa13.94□□□□□ -0.18
AC004022.2-201ENST00000413824 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
AC004022.2-201ENST00000413824 FKBP8Q14318 412 aa13.9□□□□□ -0.18
AC004022.2-201ENST00000413824 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC004022.2-201ENST00000413824 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
AC004022.2-201ENST00000413824 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
AC004022.2-201ENST00000413824 CLCN6P51797 869 aa13.82□□□□□ -0.2
AC004022.2-201ENST00000413824 PAK3O75914 559 aaPredicted RBP13.76□□□□□ -0.21
AC004022.2-201ENST00000413824 MIER1Q8N108 512 aa13.73□□□□□ -0.21
AC004022.2-201ENST00000413824 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
AC004022.2-201ENST00000413824 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
AC004022.2-201ENST00000413824 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
AC004022.2-201ENST00000413824 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
AC004022.2-201ENST00000413824 GALR2O43603 387 aaPredicted RBP13.62□□□□□ -0.23
AC004022.2-201ENST00000413824 DCBLD2Q96PD2 775 aa13.59□□□□□ -0.23
AC004022.2-201ENST00000413824 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
AC004022.2-201ENST00000413824 FBXO3Q9UK99 471 aa13.58□□□□□ -0.24
AC004022.2-201ENST00000413824 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
AC004022.2-201ENST00000413824 CCDC61Q9Y6R9 512 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms