RNA–Protein interactions for RNA: ENST00000411650.5

UBP1-203, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 859 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-203ENST00000411650 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
UBP1-203ENST00000411650 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
UBP1-203ENST00000411650 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
UBP1-203ENST00000411650 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
UBP1-203ENST00000411650 FOXD1Q16676 465 aa17.68■□□□□ 0.42
UBP1-203ENST00000411650 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
UBP1-203ENST00000411650 PPP6R1Q9UPN7 881 aa16.64■□□□□ 0.25
UBP1-203ENST00000411650 ADRA2BP18089 450 aa16.57■□□□□ 0.24
UBP1-203ENST00000411650 PIAS4Q8N2W9 510 aaPredicted RBP16.52■□□□□ 0.24
UBP1-203ENST00000411650 MSH5O43196 834 aa16.45■□□□□ 0.22
UBP1-203ENST00000411650 POTEDQ86YR6 584 aa15.91■□□□□ 0.14
UBP1-203ENST00000411650 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
UBP1-203ENST00000411650 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
UBP1-203ENST00000411650 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
UBP1-203ENST00000411650 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
UBP1-203ENST00000411650 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
UBP1-203ENST00000411650 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
UBP1-203ENST00000411650 RNF216Q9NWF9 866 aaPredicted RBP14.46□□□□□ -0.09
UBP1-203ENST00000411650 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
UBP1-203ENST00000411650 NCBP3Q53F19 620 aaKnown RBP14.34□□□□□ -0.11
UBP1-203ENST00000411650 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.13
UBP1-203ENST00000411650 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
UBP1-203ENST00000411650 KCNA4P22459 653 aa14.05□□□□□ -0.16
UBP1-203ENST00000411650 CACNB1Q02641 598 aaPredicted RBP14.04□□□□□ -0.16
UBP1-203ENST00000411650 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
UBP1-203ENST00000411650 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
UBP1-203ENST00000411650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.21e-6■■■□□ 15.3
UBP1-203ENST00000411650 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
UBP1-203ENST00000411650 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
UBP1-203ENST00000411650 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
UBP1-203ENST00000411650 CAPN15O75808 1086 aa13.28□□□□□ -0.28
UBP1-203ENST00000411650 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
UBP1-203ENST00000411650 DSG3P32926 999 aa13.23□□□□□ -0.29
UBP1-203ENST00000411650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
UBP1-203ENST00000411650 HNRNPUL2Q1KMD3 747 aaKnown RBP13.17□□□□□ -0.3
UBP1-203ENST00000411650 APLP2Q06481 763 aa13.13□□□□□ -0.31
UBP1-203ENST00000411650 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
UBP1-203ENST00000411650 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
UBP1-203ENST00000411650 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
UBP1-203ENST00000411650 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
UBP1-203ENST00000411650 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
UBP1-203ENST00000411650 ABCB7O75027 752 aa13.02□□□□□ -0.33
UBP1-203ENST00000411650 ZBTB22O15209 634 aa12.96□□□□□ -0.33
UBP1-203ENST00000411650 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
UBP1-203ENST00000411650 POLA2Q14181 598 aa12.79□□□□□ -0.36
UBP1-203ENST00000411650 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
UBP1-203ENST00000411650 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
UBP1-203ENST00000411650 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
UBP1-203ENST00000411650 POTEHQ6S545 545 aa12.47□□□□□ -0.41
UBP1-203ENST00000411650 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
UBP1-203ENST00000411650 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
UBP1-203ENST00000411650 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
UBP1-203ENST00000411650 EHMT2Q96KQ7 1210 aa12.3□□□□□ -0.44
UBP1-203ENST00000411650 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
UBP1-203ENST00000411650 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
UBP1-203ENST00000411650 FBLN2P98095 1184 aa12.25□□□□□ -0.45
UBP1-203ENST00000411650 REM2Q8IYK8 340 aaPredicted RBP12.22□□□□□ -0.45
UBP1-203ENST00000411650 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
UBP1-203ENST00000411650 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
UBP1-203ENST00000411650 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
UBP1-203ENST00000411650 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
UBP1-203ENST00000411650 SSUH2Q9Y2M2 353 aa12.05□□□□□ -0.48
UBP1-203ENST00000411650 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
UBP1-203ENST00000411650 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
UBP1-203ENST00000411650 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
UBP1-203ENST00000411650 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
UBP1-203ENST00000411650 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBP1-203ENST00000411650 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
UBP1-203ENST00000411650 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
UBP1-203ENST00000411650 SP7Q8TDD2 431 aaPredicted RBP11.74□□□□□ -0.53
UBP1-203ENST00000411650 HAX1O00165 279 aa11.73□□□□□ -0.53
UBP1-203ENST00000411650 SPDYE4A6NLX3 237 aa11.69□□□□□ -0.54
UBP1-203ENST00000411650 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
UBP1-203ENST00000411650 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
UBP1-203ENST00000411650 EVX2Q03828 476 aa11.67□□□□□ -0.54
UBP1-203ENST00000411650 NISCHQ9Y2I1 1504 aa11.64□□□□□ -0.55
UBP1-203ENST00000411650 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
UBP1-203ENST00000411650 STAG3Q9UJ98 1225 aa11.52□□□□□ -0.57
UBP1-203ENST00000411650 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
UBP1-203ENST00000411650 PROM2Q8N271 834 aa11.49□□□□□ -0.57
UBP1-203ENST00000411650 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
UBP1-203ENST00000411650 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
UBP1-203ENST00000411650 GABBR2O75899 941 aa11.38□□□□□ -0.59
UBP1-203ENST00000411650 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
UBP1-203ENST00000411650 ZNF579Q8NAF0 562 aaKnown RBP11.25□□□□□ -0.61
UBP1-203ENST00000411650 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
UBP1-203ENST00000411650 FKBP8Q14318 412 aa11.23□□□□□ -0.61
UBP1-203ENST00000411650 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
UBP1-203ENST00000411650 POTEIP0CG38 1075 aa11.18□□□□□ -0.62
UBP1-203ENST00000411650 CLCN6P51797 869 aa11.18□□□□□ -0.62
UBP1-203ENST00000411650 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
UBP1-203ENST00000411650 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
UBP1-203ENST00000411650 GALR2O43603 387 aaPredicted RBP11.12□□□□□ -0.63
UBP1-203ENST00000411650 MIER1Q8N108 512 aa11.1□□□□□ -0.63
UBP1-203ENST00000411650 DCBLD2Q96PD2 775 aa11.05□□□□□ -0.64
UBP1-203ENST00000411650 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
UBP1-203ENST00000411650 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
UBP1-203ENST00000411650 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
UBP1-203ENST00000411650 RASEFQ8IZ41 740 aa11.02□□□□□ -0.65
UBP1-203ENST00000411650 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms