RNA–Protein interactions for RNA: ENST00000411293.1

RNU6-1054P-201, Transcript of RNA, U6 small nuclear 1054, pseudogene, humanhuman

BASIC

Gene RNU6-1054P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1054P-201ENST00000411293 POTEDQ86YR6 584 aa7.28□□□□□ -1.24
RNU6-1054P-201ENST00000411293 AEBP2Q6ZN18 517 aaPredicted RBP7.17□□□□□ -1.26
RNU6-1054P-201ENST00000411293 CHIC1Q5VXU3 224 aa6.84□□□□□ -1.31
RNU6-1054P-201ENST00000411293 SENP3Q9H4L4 574 aaPredicted RBP6.27□□□□□ -1.41
RNU6-1054P-201ENST00000411293 PHF23Q9BUL5 403 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1054P-201ENST00000411293 MSH5O43196 834 aa5.86□□□□□ -1.47
RNU6-1054P-201ENST00000411293 FOXD1Q16676 465 aa5.78□□□□□ -1.48
RNU6-1054P-201ENST00000411293 CACNB1Q02641 598 aaPredicted RBP5.56□□□□□ -1.52
RNU6-1054P-201ENST00000411293 POTEHQ6S545 545 aa5.55□□□□□ -1.52
RNU6-1054P-201ENST00000411293 PIAS4Q8N2W9 510 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1054P-201ENST00000411293 PLPPR3Q6T4P5 718 aa5.31□□□□□ -1.56
RNU6-1054P-201ENST00000411293 PPP6R1Q9UPN7 881 aa5.21□□□□□ -1.58
RNU6-1054P-201ENST00000411293 ADRA2BP18089 450 aa5.2□□□□□ -1.58
RNU6-1054P-201ENST00000411293 PLSCR2Q9NRY7 297 aa4.98□□□□□ -1.61
RNU6-1054P-201ENST00000411293 DMRT2Q9Y5R5 561 aa4.91□□□□□ -1.62
RNU6-1054P-201ENST00000411293 SCAF1Q9H7N4 1312 aaKnown RBP4.91□□□□□ -1.62
RNU6-1054P-201ENST00000411293 MAPK8IP2Q13387 824 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1054P-201ENST00000411293 RNF39Q9H2S5 420 aa4.81□□□□□ -1.64
RNU6-1054P-201ENST00000411293 C1QBPQ07021 282 aaKnown RBP4.77□□□□□ -1.65
RNU6-1054P-201ENST00000411293 SP7Q8TDD2 431 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1054P-201ENST00000411293 DCAF8L1A6NGE4 600 aa4.71□□□□□ -1.66
RNU6-1054P-201ENST00000411293 HOXD11P31277 338 aaPredicted RBP4.65□□□□□ -1.67
RNU6-1054P-201ENST00000411293 DNAJC5BQ9UF47 199 aa4.62□□□□□ -1.67
RNU6-1054P-201ENST00000411293 CNKSR2Q8WXI2 1034 aa4.59□□□□□ -1.67
RNU6-1054P-201ENST00000411293 RNF216Q9NWF9 866 aaPredicted RBP4.59□□□□□ -1.67
RNU6-1054P-201ENST00000411293 PPP4R3CPQ6ZMV5 832 aa4.58□□□□□ -1.68
RNU6-1054P-201ENST00000411293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNU6-1054P-201ENST00000411293 NCBP3Q53F19 620 aaKnown RBP4.44□□□□□ -1.7
RNU6-1054P-201ENST00000411293 LHX8Q68G74 356 aa4.42□□□□□ -1.7
RNU6-1054P-201ENST00000411293 PCDH10Q9P2E7 1040 aa4.37□□□□□ -1.71
RNU6-1054P-201ENST00000411293 CHRDL2Q6WN34 429 aa4.33□□□□□ -1.72
RNU6-1054P-201ENST00000411293 CAPN15O75808 1086 aa4.32□□□□□ -1.72
RNU6-1054P-201ENST00000411293 DSG3P32926 999 aa4.32□□□□□ -1.72
RNU6-1054P-201ENST00000411293 APLP2Q06481 763 aa4.31□□□□□ -1.72
RNU6-1054P-201ENST00000411293 U3KPZ7 1027 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1054P-201ENST00000411293 NPM3O75607 178 aaKnown RBP4.27□□□□□ -1.73
RNU6-1054P-201ENST00000411293 SPINK5Q9NQ38 1064 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1054P-201ENST00000411293 ZNF219Q9P2Y4 722 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1054P-201ENST00000411293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1054P-201ENST00000411293 HNRNPUL2Q1KMD3 747 aaKnown RBP4.23□□□□□ -1.73
RNU6-1054P-201ENST00000411293 POTEMA6NI47 508 aa4.22□□□□□ -1.73
RNU6-1054P-201ENST00000411293 RBM42Q9BTD8 480 aaKnown RBP4.22□□□□□ -1.73
RNU6-1054P-201ENST00000411293 HAX1O00165 279 aa4.2□□□□□ -1.74
RNU6-1054P-201ENST00000411293 TRHP20396 242 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1054P-201ENST00000411293 SAMD1Q6SPF0 538 aaPredicted RBP4.17□□□□□ -1.74
RNU6-1054P-201ENST00000411293 POTEGQ6S5H5 508 aa4.16□□□□□ -1.74
RNU6-1054P-201ENST00000411293 ABCB7O75027 752 aa4.14□□□□□ -1.75
RNU6-1054P-201ENST00000411293 SLC4A2P04920 1241 aa4.1□□□□□ -1.75
RNU6-1054P-201ENST00000411293 AKT1S1Q96B36 256 aa4.05□□□□□ -1.76
RNU6-1054P-201ENST00000411293 ZBTB12Q9Y330 459 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1054P-201ENST00000411293 POLA2Q14181 598 aa4.02□□□□□ -1.77
RNU6-1054P-201ENST00000411293 MYCNP04198 464 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1054P-201ENST00000411293 KCNA4P22459 653 aa3.98□□□□□ -1.77
RNU6-1054P-201ENST00000411293 PIP4P2Q8N4L2 257 aa3.97□□□□□ -1.77
RNU6-1054P-201ENST00000411293 REM2Q8IYK8 340 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1054P-201ENST00000411293 FXR2P51116 673 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-1054P-201ENST00000411293 EVX2Q03828 476 aa3.92□□□□□ -1.78
RNU6-1054P-201ENST00000411293 PITPNM1O00562 1244 aa3.9□□□□□ -1.79
RNU6-1054P-201ENST00000411293 GABBR2O75899 941 aa3.89□□□□□ -1.79
RNU6-1054P-201ENST00000411293 OSCARQ8IYS5 282 aa3.89□□□□□ -1.79
RNU6-1054P-201ENST00000411293 SPDYE2BA6NHP3 402 aa3.86□□□□□ -1.79
RNU6-1054P-201ENST00000411293 SPDYE6P0CI01 402 aa3.86□□□□□ -1.79
RNU6-1054P-201ENST00000411293 SPDYE2Q495Y8 402 aa3.86□□□□□ -1.79
RNU6-1054P-201ENST00000411293 FOXD4L1Q9NU39 408 aa3.85□□□□□ -1.79
RNU6-1054P-201ENST00000411293 FBLN2P98095 1184 aa3.83□□□□□ -1.8
RNU6-1054P-201ENST00000411293 SPDYE1Q8NFV5 336 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1054P-201ENST00000411293 OTUD5Q96G74 571 aa3.83□□□□□ -1.8
RNU6-1054P-201ENST00000411293 C19orf67A6NJJ6 358 aa3.82□□□□□ -1.8
RNU6-1054P-201ENST00000411293 PRKAR2AP13861 404 aaKnown RBP3.82□□□□□ -1.8
RNU6-1054P-201ENST00000411293 CLCN6P51797 869 aa3.82□□□□□ -1.8
RNU6-1054P-201ENST00000411293 ATF5Q9Y2D1 282 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1054P-201ENST00000411293 ATXN8OSP0DMR3 200 aa3.8□□□□□ -1.8
RNU6-1054P-201ENST00000411293 MMRN1Q13201 1228 aa3.79□□□□□ -1.8
RNU6-1054P-201ENST00000411293 CDAN1Q8IWY9 1227 aa3.79□□□□□ -1.8
RNU6-1054P-201ENST00000411293 CLEC11AQ9Y240 323 aa3.79□□□□□ -1.8
RNU6-1054P-201ENST00000411293 EHMT2Q96KQ7 1210 aa3.77□□□□□ -1.81
RNU6-1054P-201ENST00000411293 SLC4A1APQ9BWU0 796 aaKnown RBP3.77□□□□□ -1.81
RNU6-1054P-201ENST00000411293 ZNF692Q9BU19 519 aaPredicted RBP3.75□□□□□ -1.81
RNU6-1054P-201ENST00000411293 SSUH2Q9Y2M2 353 aa3.74□□□□□ -1.81
RNU6-1054P-201ENST00000411293 PRR29P0C7W0 189 aa3.73□□□□□ -1.81
RNU6-1054P-201ENST00000411293 POTEIP0CG38 1075 aa3.73□□□□□ -1.81
RNU6-1054P-201ENST00000411293 CD44P16070 742 aaKnown RBP3.7□□□□□ -1.82
RNU6-1054P-201ENST00000411293 DCBLD2Q96PD2 775 aa3.7□□□□□ -1.82
RNU6-1054P-201ENST00000411293 CHADLQ6NUI6 762 aa3.69□□□□□ -1.82
RNU6-1054P-201ENST00000411293 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1054P-201ENST00000411293 PABPN1Q86U42 306 aaKnown RBP eCLIP3.67□□□□□ -1.82
RNU6-1054P-201ENST00000411293 SPNS2Q8IVW8 549 aa3.67□□□□□ -1.82
RNU6-1054P-201ENST00000411293 FARP1Q9Y4F1 1045 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1054P-201ENST00000411293 FAM163AQ96GL9 167 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1054P-201ENST00000411293 MKRN4PQ13434 485 aaPredicted RBP3.65□□□□□ -1.83
RNU6-1054P-201ENST00000411293 ZNF579Q8NAF0 562 aaKnown RBP3.64□□□□□ -1.83
RNU6-1054P-201ENST00000411293 PAK3O75914 559 aaPredicted RBP3.62□□□□□ -1.83
RNU6-1054P-201ENST00000411293 STAG3Q9UJ98 1225 aa3.62□□□□□ -1.83
RNU6-1054P-201ENST00000411293 ZBTB22O15209 634 aa3.61□□□□□ -1.83
RNU6-1054P-201ENST00000411293 MAMSTRQ6ZN01 415 aa3.61□□□□□ -1.83
RNU6-1054P-201ENST00000411293 CSRNP3Q8WYN3 585 aa3.61□□□□□ -1.83
RNU6-1054P-201ENST00000411293 ZRANB1Q9UGI0 708 aa3.61□□□□□ -1.83
RNU6-1054P-201ENST00000411293 NPM1P06748 294 aaKnown RBP eCLIP3.57□□□□□ -1.84
RNU6-1054P-201ENST00000411293 POTEB2H3BUK9 544 aa3.56□□□□□ -1.84
RNU6-1054P-201ENST00000411293 GALR2O43603 387 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms