RNA–Protein interactions for RNA: ENST00000410942.1

RN7SKP33-201, Transcript of RNA, 7SK small nuclear pseudogene 33, humanhuman

BASIC

Gene RN7SKP33, Length 340 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP33-201ENST00000410942 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
RN7SKP33-201ENST00000410942 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
RN7SKP33-201ENST00000410942 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.89
RN7SKP33-201ENST00000410942 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
RN7SKP33-201ENST00000410942 FOXD1Q16676 465 aa19.18■□□□□ 0.66
RN7SKP33-201ENST00000410942 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
RN7SKP33-201ENST00000410942 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
RN7SKP33-201ENST00000410942 ADRA2BP18089 450 aa18.15■□□□□ 0.5
RN7SKP33-201ENST00000410942 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
RN7SKP33-201ENST00000410942 MSH5O43196 834 aa17.78■□□□□ 0.44
RN7SKP33-201ENST00000410942 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
RN7SKP33-201ENST00000410942 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
RN7SKP33-201ENST00000410942 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
RN7SKP33-201ENST00000410942 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
RN7SKP33-201ENST00000410942 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
RN7SKP33-201ENST00000410942 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
RN7SKP33-201ENST00000410942 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
RN7SKP33-201ENST00000410942 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
RN7SKP33-201ENST00000410942 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
RN7SKP33-201ENST00000410942 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
RN7SKP33-201ENST00000410942 KCNA4P22459 653 aa15.73■□□□□ 0.11
RN7SKP33-201ENST00000410942 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
RN7SKP33-201ENST00000410942 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
RN7SKP33-201ENST00000410942 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
RN7SKP33-201ENST00000410942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
RN7SKP33-201ENST00000410942 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
RN7SKP33-201ENST00000410942 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
RN7SKP33-201ENST00000410942 SLC4A2P04920 1241 aa14.96□□□□□ -0.01
RN7SKP33-201ENST00000410942 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
RN7SKP33-201ENST00000410942 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
RN7SKP33-201ENST00000410942 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
RN7SKP33-201ENST00000410942 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
RN7SKP33-201ENST00000410942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
RN7SKP33-201ENST00000410942 CAPN15O75808 1086 aa14.52□□□□□ -0.09
RN7SKP33-201ENST00000410942 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
RN7SKP33-201ENST00000410942 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
RN7SKP33-201ENST00000410942 ZBTB22O15209 634 aa14.49□□□□□ -0.09
RN7SKP33-201ENST00000410942 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
RN7SKP33-201ENST00000410942 APLP2Q06481 763 aa14.43□□□□□ -0.1
RN7SKP33-201ENST00000410942 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
RN7SKP33-201ENST00000410942 DSG3P32926 999 aa14.37□□□□□ -0.11
RN7SKP33-201ENST00000410942 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
RN7SKP33-201ENST00000410942 ABCB7O75027 752 aa14.24□□□□□ -0.13
RN7SKP33-201ENST00000410942 ATF5Q9Y2D1 282 aaPredicted RBP14.21□□□□□ -0.13
RN7SKP33-201ENST00000410942 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
RN7SKP33-201ENST00000410942 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
RN7SKP33-201ENST00000410942 POLA2Q14181 598 aa14.07□□□□□ -0.16
RN7SKP33-201ENST00000410942 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
RN7SKP33-201ENST00000410942 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
RN7SKP33-201ENST00000410942 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
RN7SKP33-201ENST00000410942 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
RN7SKP33-201ENST00000410942 FBLN2P98095 1184 aa13.57□□□□□ -0.24
RN7SKP33-201ENST00000410942 MKRN4PQ13434 485 aaPredicted RBP13.57□□□□□ -0.24
RN7SKP33-201ENST00000410942 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
RN7SKP33-201ENST00000410942 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
RN7SKP33-201ENST00000410942 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
RN7SKP33-201ENST00000410942 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
RN7SKP33-201ENST00000410942 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
RN7SKP33-201ENST00000410942 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
RN7SKP33-201ENST00000410942 POTEHQ6S545 545 aa13.26□□□□□ -0.29
RN7SKP33-201ENST00000410942 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
RN7SKP33-201ENST00000410942 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
RN7SKP33-201ENST00000410942 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
RN7SKP33-201ENST00000410942 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
RN7SKP33-201ENST00000410942 SPDYE1Q8NFV5 336 aaPredicted RBP13.07□□□□□ -0.32
RN7SKP33-201ENST00000410942 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
RN7SKP33-201ENST00000410942 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
RN7SKP33-201ENST00000410942 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
RN7SKP33-201ENST00000410942 FXR2P51116 673 aaKnown RBP eCLIP13□□□□□ -0.33
RN7SKP33-201ENST00000410942 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
RN7SKP33-201ENST00000410942 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
RN7SKP33-201ENST00000410942 PROM2Q8N271 834 aa12.8□□□□□ -0.36
RN7SKP33-201ENST00000410942 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
RN7SKP33-201ENST00000410942 STAG3Q9UJ98 1225 aa12.77□□□□□ -0.37
RN7SKP33-201ENST00000410942 FKBP8Q14318 412 aa12.75□□□□□ -0.37
RN7SKP33-201ENST00000410942 HAX1O00165 279 aa12.69□□□□□ -0.38
RN7SKP33-201ENST00000410942 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
RN7SKP33-201ENST00000410942 EVX2Q03828 476 aa12.61□□□□□ -0.39
RN7SKP33-201ENST00000410942 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP33-201ENST00000410942 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
RN7SKP33-201ENST00000410942 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
RN7SKP33-201ENST00000410942 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
RN7SKP33-201ENST00000410942 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
RN7SKP33-201ENST00000410942 MIER1Q8N108 512 aa12.42□□□□□ -0.42
RN7SKP33-201ENST00000410942 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
RN7SKP33-201ENST00000410942 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
RN7SKP33-201ENST00000410942 FBXO3Q9UK99 471 aa12.35□□□□□ -0.43
RN7SKP33-201ENST00000410942 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
RN7SKP33-201ENST00000410942 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
RN7SKP33-201ENST00000410942 GABBR2O75899 941 aa12.3□□□□□ -0.44
RN7SKP33-201ENST00000410942 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
RN7SKP33-201ENST00000410942 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
RN7SKP33-201ENST00000410942 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
RN7SKP33-201ENST00000410942 TSPYL2Q9H2G4 693 aaPredicted RBP12.21□□□□□ -0.45
RN7SKP33-201ENST00000410942 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
RN7SKP33-201ENST00000410942 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
RN7SKP33-201ENST00000410942 RASEFQ8IZ41 740 aa12.19□□□□□ -0.46
RN7SKP33-201ENST00000410942 CLCN6P51797 869 aa12.16□□□□□ -0.46
RN7SKP33-201ENST00000410942 NUBP1P53384 320 aa12.16□□□□□ -0.46
RN7SKP33-201ENST00000410942 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 418.5 ms