RNA–Protein interactions for RNA: ENST00000410180.1

RN7SKP16-201, Transcript of RNA, 7SK small nuclear pseudogene 16, humanhuman

BASIC

Gene RN7SKP16, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP16-201ENST00000410180 NISCHQ9Y2I1 1504 aa11.35□□□□□ -0.59
RN7SKP16-201ENST00000410180 AEBP2Q6ZN18 517 aaPredicted RBP11.05□□□□□ -0.64
RN7SKP16-201ENST00000410180 CHIC1Q5VXU3 224 aa10.35□□□□□ -0.75
RN7SKP16-201ENST00000410180 POTEDQ86YR6 584 aa10□□□□□ -0.81
RN7SKP16-201ENST00000410180 CCDC180Q9P1Z9 1646 aa9.82□□□□□ -0.84
RN7SKP16-201ENST00000410180 ZCCHC6Q5VYS8 1495 aaKnown RBP9.65□□□□□ -0.87
RN7SKP16-201ENST00000410180 SENP3Q9H4L4 574 aaPredicted RBP9.59□□□□□ -0.87
RN7SKP16-201ENST00000410180 DCAF1Q9Y4B6 1507 aa9.4□□□□□ -0.91
RN7SKP16-201ENST00000410180 SHROOM4Q9ULL8 1493 aa9.36□□□□□ -0.91
RN7SKP16-201ENST00000410180 PHF23Q9BUL5 403 aaPredicted RBP9.36□□□□□ -0.91
RN7SKP16-201ENST00000410180 MYO15BQ96JP2 1530 aa9.15□□□□□ -0.94
RN7SKP16-201ENST00000410180 ABCC9O60706 1549 aa9.14□□□□□ -0.95
RN7SKP16-201ENST00000410180 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
RN7SKP16-201ENST00000410180 FOXD1Q16676 465 aa9.04□□□□□ -0.96
RN7SKP16-201ENST00000410180 SUPT5HO00267 1087 aaKnown RBP9.03□□□□□ -0.96
RN7SKP16-201ENST00000410180 NACADO15069 1562 aa8.98□□□□□ -0.97
RN7SKP16-201ENST00000410180 DCAF8L2P0C7V8 631 aa8.94□□□□□ -0.98
RN7SKP16-201ENST00000410180 RSF1Q96T23 1441 aaPredicted RBP8.9□□□□□ -0.98
RN7SKP16-201ENST00000410180 RB1CC1Q8TDY2 1594 aa8.89□□□□□ -0.99
RN7SKP16-201ENST00000410180 UNC13AQ9UPW8 1703 aa8.87□□□□□ -0.99
RN7SKP16-201ENST00000410180 EIF4G1Q04637 1599 aaKnown RBP8.83□□□□□ -1
RN7SKP16-201ENST00000410180 CECR2Q9BXF3 1484 aa8.83□□□□□ -1
RN7SKP16-201ENST00000410180 MROH2BQ7Z745 1585 aa8.82□□□□□ -1
RN7SKP16-201ENST00000410180 MSH5O43196 834 aa8.8□□□□□ -1
RN7SKP16-201ENST00000410180 BAZ1AQ9NRL2 1556 aaPredicted RBP8.78□□□□□ -1
RN7SKP16-201ENST00000410180 WIZO95785 1651 aa8.78□□□□□ -1
RN7SKP16-201ENST00000410180 BICRAQ9NZM4 1560 aa8.73□□□□□ -1.01
RN7SKP16-201ENST00000410180 SMARCA4P51532 1647 aa8.71□□□□□ -1.02
RN7SKP16-201ENST00000410180 TOP2AP11388 1531 aaKnown RBP8.67□□□□□ -1.02
RN7SKP16-201ENST00000410180 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
RN7SKP16-201ENST00000410180 PEG3Q9GZU2 1588 aa8.61□□□□□ -1.03
RN7SKP16-201ENST00000410180 CCDC88BA6NC98 1476 aa8.53□□□□□ -1.04
RN7SKP16-201ENST00000410180 LOC105371045A0A1W2PR82 267 aa8.53□□□□□ -1.04
RN7SKP16-201ENST00000410180 ABCC8Q09428 1581 aa8.51□□□□□ -1.05
RN7SKP16-201ENST00000410180 HRCP23327 699 aa8.43□□□□□ -1.06
RN7SKP16-201ENST00000410180 ATAD2BQ9ULI0 1458 aa8.43□□□□□ -1.06
RN7SKP16-201ENST00000410180 TRIM41Q8WV44 630 aa8.42□□□□□ -1.06
RN7SKP16-201ENST00000410180 SYNJ1O43426 1573 aa8.41□□□□□ -1.06
RN7SKP16-201ENST00000410180 PABPN1Q86U42 306 aaKnown RBP eCLIP8.39□□□□□ -1.07
RN7SKP16-201ENST00000410180 HMGXB3Q12766 1538 aa8.37□□□□□ -1.07
RN7SKP16-201ENST00000410180 PCGF6Q9BYE7 350 aa8.36□□□□□ -1.07
RN7SKP16-201ENST00000410180 BAZ1BQ9UIG0 1483 aaKnown RBP8.36□□□□□ -1.07
RN7SKP16-201ENST00000410180 SOGA1O94964 1423 aa8.35□□□□□ -1.07
RN7SKP16-201ENST00000410180 RUSC2Q8N2Y8 1516 aa8.34□□□□□ -1.07
RN7SKP16-201ENST00000410180 BIVM-ERCC5R4GMW8 1640 aa8.33□□□□□ -1.08
RN7SKP16-201ENST00000410180 FAM9AQ8IZU1 332 aaPredicted RBP8.32□□□□□ -1.08
RN7SKP16-201ENST00000410180 KIF21BO75037 1637 aa8.32□□□□□ -1.08
RN7SKP16-201ENST00000410180 PRDM2Q13029 1718 aa8.31□□□□□ -1.08
RN7SKP16-201ENST00000410180 WRNQ14191 1432 aaPredicted RBP eCLIP8.3□□□□□ -1.08
RN7SKP16-201ENST00000410180 TOP2BQ02880 1626 aa8.3□□□□□ -1.08
RN7SKP16-201ENST00000410180 EEA1Q15075 1411 aa8.29□□□□□ -1.08
RN7SKP16-201ENST00000410180 NCAPD3P42695 1498 aa8.28□□□□□ -1.08
RN7SKP16-201ENST00000410180 TRIM26Q12899 539 aaPredicted RBP8.27□□□□□ -1.09
RN7SKP16-201ENST00000410180 CEP162Q5TB80 1403 aa8.27□□□□□ -1.09
RN7SKP16-201ENST00000410180 PPARGC1BQ86YN6 1023 aaKnown RBP8.25□□□□□ -1.09
RN7SKP16-201ENST00000410180 CUX1P39880 1505 aa8.24□□□□□ -1.09
RN7SKP16-201ENST00000410180 TNIKQ9UKE5 1360 aa8.24□□□□□ -1.09
RN7SKP16-201ENST00000410180 PIAS4Q8N2W9 510 aaPredicted RBP8.24□□□□□ -1.09
RN7SKP16-201ENST00000410180 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
RN7SKP16-201ENST00000410180 CEP164Q9UPV0 1460 aa8.2□□□□□ -1.1
RN7SKP16-201ENST00000410180 CFTRP13569 1480 aa8.19□□□□□ -1.1
RN7SKP16-201ENST00000410180 EHMT2Q96KQ7 1210 aa8.19□□□□□ -1.1
RN7SKP16-201ENST00000410180 RAPGEF2Q9Y4G8 1499 aa8.18□□□□□ -1.1
RN7SKP16-201ENST00000410180 ERICH3Q5RHP9 1530 aa8.17□□□□□ -1.1
RN7SKP16-201ENST00000410180 PRXQ9BXM0 1461 aa8.15□□□□□ -1.1
RN7SKP16-201ENST00000410180 CC2D2AQ9P2K1 1620 aa8.14□□□□□ -1.11
RN7SKP16-201ENST00000410180 CSRNP3Q8WYN3 585 aa8.14□□□□□ -1.11
RN7SKP16-201ENST00000410180 ARAP1Q96P48 1450 aa8.12□□□□□ -1.11
RN7SKP16-201ENST00000410180 CLIP1P30622 1438 aa8.1□□□□□ -1.11
RN7SKP16-201ENST00000410180 VPS8Q8N3P4 1428 aa8.1□□□□□ -1.11
RN7SKP16-201ENST00000410180 WDR97A6NE52 1622 aa8.08□□□□□ -1.12
RN7SKP16-201ENST00000410180 CACNB1Q02641 598 aaPredicted RBP8.08□□□□□ -1.12
RN7SKP16-201ENST00000410180 CADPSQ9ULU8 1353 aa8.04□□□□□ -1.12
RN7SKP16-201ENST00000410180 FGD5Q6ZNL6 1462 aa8.04□□□□□ -1.12
RN7SKP16-201ENST00000410180 DNMBPQ6XZF7 1577 aa8.04□□□□□ -1.12
RN7SKP16-201ENST00000410180 KIF27Q86VH2 1401 aa8.02□□□□□ -1.13
RN7SKP16-201ENST00000410180 ARHGAP35Q9NRY4 1499 aa8.01□□□□□ -1.13
RN7SKP16-201ENST00000410180 NESP48681 1621 aa8□□□□□ -1.13
RN7SKP16-201ENST00000410180 CFAP43Q8NDM7 1665 aa8□□□□□ -1.13
RN7SKP16-201ENST00000410180 ZEB1P37275 1124 aaPredicted RBP8□□□□□ -1.13
RN7SKP16-201ENST00000410180 CUX2O14529 1486 aa8□□□□□ -1.13
RN7SKP16-201ENST00000410180 FANCD2Q9BXW9 1451 aa8□□□□□ -1.13
RN7SKP16-201ENST00000410180 UBTFP17480 764 aaKnown RBP7.99□□□□□ -1.13
RN7SKP16-201ENST00000410180 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
RN7SKP16-201ENST00000410180 ABCA5Q8WWZ7 1642 aa7.98□□□□□ -1.13
RN7SKP16-201ENST00000410180 POLA1P09884 1462 aaPredicted RBP7.98□□□□□ -1.13
RN7SKP16-201ENST00000410180 ABCA10Q8WWZ4 1543 aa7.98□□□□□ -1.13
RN7SKP16-201ENST00000410180 URB2Q14146 1524 aaKnown RBP7.97□□□□□ -1.13
RN7SKP16-201ENST00000410180 LAMC3Q9Y6N6 1575 aa7.97□□□□□ -1.13
RN7SKP16-201ENST00000410180 IGF1RP08069 1367 aa7.97□□□□□ -1.13
RN7SKP16-201ENST00000410180 KIF21AQ7Z4S6 1674 aa7.96□□□□□ -1.13
RN7SKP16-201ENST00000410180 CUL7Q14999 1698 aa7.95□□□□□ -1.14
RN7SKP16-201ENST00000410180 CTTNBP2Q8WZ74 1663 aa7.95□□□□□ -1.14
RN7SKP16-201ENST00000410180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.95□□□□□ -1.14
RN7SKP16-201ENST00000410180 PCF11O94913 1555 aaKnown RBP7.95□□□□□ -1.14
RN7SKP16-201ENST00000410180 RAD54L2Q9Y4B4 1467 aa7.94□□□□□ -1.14
RN7SKP16-201ENST00000410180 TIAM1Q13009 1591 aa7.94□□□□□ -1.14
RN7SKP16-201ENST00000410180 TTBK1Q5TCY1 1321 aaPredicted RBP7.94□□□□□ -1.14
RN7SKP16-201ENST00000410180 RRBP1Q9P2E9 1410 aaKnown RBP7.93□□□□□ -1.14
RN7SKP16-201ENST00000410180 LRRIQ1Q96JM4 1722 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms