RNA–Protein interactions for RNA: ENST00000410144.1

RNU2-3P-201, Transcript of RNA, U2 small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU2-3P, Length 191 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-3P-201ENST00000410144 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
RNU2-3P-201ENST00000410144 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
RNU2-3P-201ENST00000410144 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
RNU2-3P-201ENST00000410144 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
RNU2-3P-201ENST00000410144 FOXD1Q16676 465 aa18.24■□□□□ 0.51
RNU2-3P-201ENST00000410144 POTEDQ86YR6 584 aa18.04■□□□□ 0.48
RNU2-3P-201ENST00000410144 MSH5O43196 834 aa17.41■□□□□ 0.38
RNU2-3P-201ENST00000410144 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
RNU2-3P-201ENST00000410144 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
RNU2-3P-201ENST00000410144 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
RNU2-3P-201ENST00000410144 ADRA2BP18089 450 aa16.43■□□□□ 0.22
RNU2-3P-201ENST00000410144 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
RNU2-3P-201ENST00000410144 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
RNU2-3P-201ENST00000410144 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
RNU2-3P-201ENST00000410144 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
RNU2-3P-201ENST00000410144 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
RNU2-3P-201ENST00000410144 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
RNU2-3P-201ENST00000410144 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
RNU2-3P-201ENST00000410144 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
RNU2-3P-201ENST00000410144 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
RNU2-3P-201ENST00000410144 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
RNU2-3P-201ENST00000410144 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
RNU2-3P-201ENST00000410144 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
RNU2-3P-201ENST00000410144 POTEHQ6S545 545 aa14.04□□□□□ -0.16
RNU2-3P-201ENST00000410144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
RNU2-3P-201ENST00000410144 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
RNU2-3P-201ENST00000410144 DSG3P32926 999 aa13.58□□□□□ -0.24
RNU2-3P-201ENST00000410144 CAPN15O75808 1086 aa13.53□□□□□ -0.24
RNU2-3P-201ENST00000410144 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
RNU2-3P-201ENST00000410144 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
RNU2-3P-201ENST00000410144 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
RNU2-3P-201ENST00000410144 APLP2Q06481 763 aa13.16□□□□□ -0.3
RNU2-3P-201ENST00000410144 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
RNU2-3P-201ENST00000410144 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
RNU2-3P-201ENST00000410144 ABCB7O75027 752 aa13.12□□□□□ -0.31
RNU2-3P-201ENST00000410144 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
RNU2-3P-201ENST00000410144 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
RNU2-3P-201ENST00000410144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
RNU2-3P-201ENST00000410144 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
RNU2-3P-201ENST00000410144 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
RNU2-3P-201ENST00000410144 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
RNU2-3P-201ENST00000410144 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
RNU2-3P-201ENST00000410144 POLA2Q14181 598 aa12.63□□□□□ -0.39
RNU2-3P-201ENST00000410144 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
RNU2-3P-201ENST00000410144 PIP4P2Q8N4L2 257 aa12.51□□□□□ -0.41
RNU2-3P-201ENST00000410144 KCNA4P22459 653 aa12.5□□□□□ -0.41
RNU2-3P-201ENST00000410144 HAX1O00165 279 aa12.49□□□□□ -0.41
RNU2-3P-201ENST00000410144 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
RNU2-3P-201ENST00000410144 REM2Q8IYK8 340 aaPredicted RBP12.43□□□□□ -0.42
RNU2-3P-201ENST00000410144 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
RNU2-3P-201ENST00000410144 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
RNU2-3P-201ENST00000410144 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
RNU2-3P-201ENST00000410144 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
RNU2-3P-201ENST00000410144 EVX2Q03828 476 aa12.19□□□□□ -0.46
RNU2-3P-201ENST00000410144 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
RNU2-3P-201ENST00000410144 LHX8Q68G74 356 aa12.04□□□□□ -0.48
RNU2-3P-201ENST00000410144 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
RNU2-3P-201ENST00000410144 C19orf67A6NJJ6 358 aa11.96□□□□□ -0.49
RNU2-3P-201ENST00000410144 GABBR2O75899 941 aa11.94□□□□□ -0.5
RNU2-3P-201ENST00000410144 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
RNU2-3P-201ENST00000410144 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
RNU2-3P-201ENST00000410144 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
RNU2-3P-201ENST00000410144 FOXD4L1Q9NU39 408 aa11.93□□□□□ -0.5
RNU2-3P-201ENST00000410144 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
RNU2-3P-201ENST00000410144 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
RNU2-3P-201ENST00000410144 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
RNU2-3P-201ENST00000410144 FBLN2P98095 1184 aa11.8□□□□□ -0.52
RNU2-3P-201ENST00000410144 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
RNU2-3P-201ENST00000410144 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
RNU2-3P-201ENST00000410144 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
RNU2-3P-201ENST00000410144 ZNF692Q9BU19 519 aaPredicted RBP11.66□□□□□ -0.54
RNU2-3P-201ENST00000410144 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
RNU2-3P-201ENST00000410144 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
RNU2-3P-201ENST00000410144 CLCN6P51797 869 aa11.62□□□□□ -0.55
RNU2-3P-201ENST00000410144 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
RNU2-3P-201ENST00000410144 CD44P16070 742 aaKnown RBP11.58□□□□□ -0.56
RNU2-3P-201ENST00000410144 DCBLD2Q96PD2 775 aa11.53□□□□□ -0.56
RNU2-3P-201ENST00000410144 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.57
RNU2-3P-201ENST00000410144 FARP1Q9Y4F1 1045 aaPredicted RBP11.47□□□□□ -0.57
RNU2-3P-201ENST00000410144 PABPN1Q86U42 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
RNU2-3P-201ENST00000410144 ZBTB22O15209 634 aa11.45□□□□□ -0.58
RNU2-3P-201ENST00000410144 POTEMA6NI47 508 aa11.37□□□□□ -0.59
RNU2-3P-201ENST00000410144 ZNF579Q8NAF0 562 aaKnown RBP11.37□□□□□ -0.59
RNU2-3P-201ENST00000410144 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
RNU2-3P-201ENST00000410144 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
RNU2-3P-201ENST00000410144 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
RNU2-3P-201ENST00000410144 PCDH10Q9P2E7 1040 aa11.29□□□□□ -0.6
RNU2-3P-201ENST00000410144 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
RNU2-3P-201ENST00000410144 GALR2O43603 387 aaPredicted RBP11.23□□□□□ -0.61
RNU2-3P-201ENST00000410144 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
RNU2-3P-201ENST00000410144 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
RNU2-3P-201ENST00000410144 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
RNU2-3P-201ENST00000410144 PHF12Q96QT6 1004 aa11.07□□□□□ -0.64
RNU2-3P-201ENST00000410144 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
RNU2-3P-201ENST00000410144 PELP1Q8IZL8 1130 aaKnown RBP11.05□□□□□ -0.64
RNU2-3P-201ENST00000410144 METRNQ9UJH8 293 aa11.04□□□□□ -0.64
RNU2-3P-201ENST00000410144 C7P10643 843 aa11.02□□□□□ -0.65
RNU2-3P-201ENST00000410144 SLC39A7Q92504 469 aa11.01□□□□□ -0.65
RNU2-3P-201ENST00000410144 ASTLQ6HA08 431 aaPredicted RBP10.99□□□□□ -0.65
RNU2-3P-201ENST00000410144 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms