RNA–Protein interactions for RNA: ENST00000409986.5

LOXL3-205, Transcript of lysyl oxidase like 3, humanhuman

TSL 2 BASIC

Gene LOXL3, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-205ENST00000409986 NISCHQ9Y2I1 1504 aa38.66■■■■□ 3.78
LOXL3-205ENST00000409986 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
LOXL3-205ENST00000409986 ZCCHC6Q5VYS8 1495 aaKnown RBP32.51■■■□□ 2.8
LOXL3-205ENST00000409986 DCAF8L2P0C7V8 631 aa31.95■■■□□ 2.71
LOXL3-205ENST00000409986 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
LOXL3-205ENST00000409986 SHROOM4Q9ULL8 1493 aa31.77■■■□□ 2.68
LOXL3-205ENST00000409986 ABCC9O60706 1549 aa31.71■■■□□ 2.67
LOXL3-205ENST00000409986 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.62
LOXL3-205ENST00000409986 NACADO15069 1562 aa31.22■■■□□ 2.59
LOXL3-205ENST00000409986 SCRIBQ14160 1630 aa30.97■■■□□ 2.55
LOXL3-205ENST00000409986 RB1CC1Q8TDY2 1594 aa30.91■■■□□ 2.54
LOXL3-205ENST00000409986 SUPT5HO00267 1087 aaKnown RBP30.63■■■□□ 2.49
LOXL3-205ENST00000409986 UNC13AQ9UPW8 1703 aa30.36■■■□□ 2.45
LOXL3-205ENST00000409986 CECR2Q9BXF3 1484 aa30.11■■■□□ 2.41
LOXL3-205ENST00000409986 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
LOXL3-205ENST00000409986 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
LOXL3-205ENST00000409986 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
LOXL3-205ENST00000409986 MROH2BQ7Z745 1585 aa29.93■■■□□ 2.38
LOXL3-205ENST00000409986 BAZ1AQ9NRL2 1556 aaPredicted RBP29.8■■■□□ 2.36
LOXL3-205ENST00000409986 WIZO95785 1651 aa29.68■■■□□ 2.34
LOXL3-205ENST00000409986 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
LOXL3-205ENST00000409986 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
LOXL3-205ENST00000409986 TOP2AP11388 1531 aaKnown RBP29.31■■■□□ 2.28
LOXL3-205ENST00000409986 PEG3Q9GZU2 1588 aa29.28■■■□□ 2.28
LOXL3-205ENST00000409986 ATAD2BQ9ULI0 1458 aa29.17■■■□□ 2.26
LOXL3-205ENST00000409986 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
LOXL3-205ENST00000409986 SMARCA2P51531 1590 aa29.08■■■□□ 2.25
LOXL3-205ENST00000409986 CCDC88BA6NC98 1476 aa29.08■■■□□ 2.25
LOXL3-205ENST00000409986 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
LOXL3-205ENST00000409986 NCAPD3P42695 1498 aa28.87■■■□□ 2.21
LOXL3-205ENST00000409986 HRCP23327 699 aa28.81■■■□□ 2.2
LOXL3-205ENST00000409986 HMGXB3Q12766 1538 aa28.8■■■□□ 2.2
LOXL3-205ENST00000409986 TRIM41Q8WV44 630 aa28.73■■■□□ 2.19
LOXL3-205ENST00000409986 CC2D2AQ9P2K1 1620 aa28.66■■■□□ 2.18
LOXL3-205ENST00000409986 PCGF6Q9BYE7 350 aa28.62■■■□□ 2.17
LOXL3-205ENST00000409986 LOC105371045A0A1W2PR82 267 aa28.57■■■□□ 2.16
LOXL3-205ENST00000409986 ABCC8Q09428 1581 aa28.55■■■□□ 2.16
LOXL3-205ENST00000409986 WRNQ14191 1432 aaPredicted RBP eCLIP28.29■■■□□ 2.12
LOXL3-205ENST00000409986 CFTRP13569 1480 aa28.29■■■□□ 2.12
LOXL3-205ENST00000409986 FAM9AQ8IZU1 332 aaPredicted RBP28.28■■■□□ 2.12
LOXL3-205ENST00000409986 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
LOXL3-205ENST00000409986 TRIM26Q12899 539 aaPredicted RBP28.17■■■□□ 2.1
LOXL3-205ENST00000409986 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
LOXL3-205ENST00000409986 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
LOXL3-205ENST00000409986 SOGA1O94964 1423 aa28.07■■■□□ 2.08
LOXL3-205ENST00000409986 PPARGC1BQ86YN6 1023 aaKnown RBP28.05■■■□□ 2.08
LOXL3-205ENST00000409986 PRDM2Q13029 1718 aa28.05■■■□□ 2.08
LOXL3-205ENST00000409986 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
LOXL3-205ENST00000409986 RUSC2Q8N2Y8 1516 aa27.98■■■□□ 2.07
LOXL3-205ENST00000409986 BIVM-ERCC5R4GMW8 1640 aa27.97■■■□□ 2.07
LOXL3-205ENST00000409986 CUX1P39880 1505 aa27.95■■■□□ 2.07
LOXL3-205ENST00000409986 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
LOXL3-205ENST00000409986 NESP48681 1621 aa27.93■■■□□ 2.06
LOXL3-205ENST00000409986 EEA1Q15075 1411 aa27.89■■■□□ 2.06
LOXL3-205ENST00000409986 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
LOXL3-205ENST00000409986 CSRNP3Q8WYN3 585 aa27.82■■■□□ 2.04
LOXL3-205ENST00000409986 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
LOXL3-205ENST00000409986 ZEB1P37275 1124 aaPredicted RBP27.65■■■□□ 2.02
LOXL3-205ENST00000409986 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
LOXL3-205ENST00000409986 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
LOXL3-205ENST00000409986 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
LOXL3-205ENST00000409986 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
LOXL3-205ENST00000409986 TOPBP1Q92547 1522 aa27.56■■■□□ 2
LOXL3-205ENST00000409986 GOLGA3Q08378 1498 aa27.56■■■□□ 2
LOXL3-205ENST00000409986 KIF21BO75037 1637 aa27.56■■■□□ 2
LOXL3-205ENST00000409986 TNIKQ9UKE5 1360 aa27.53■■■□□ 2
LOXL3-205ENST00000409986 KIF27Q86VH2 1401 aa27.53■■■□□ 2
LOXL3-205ENST00000409986 URB2Q14146 1524 aaKnown RBP27.52■■■□□ 2
LOXL3-205ENST00000409986 KIF21AQ7Z4S6 1674 aa27.51■■■□□ 2
LOXL3-205ENST00000409986 UBTFP17480 764 aaKnown RBP27.48■■□□□ 1.99
LOXL3-205ENST00000409986 RAPGEF2Q9Y4G8 1499 aa27.46■■□□□ 1.99
LOXL3-205ENST00000409986 CUX2O14529 1486 aa27.46■■□□□ 1.99
LOXL3-205ENST00000409986 POLA1P09884 1462 aaPredicted RBP27.46■■□□□ 1.99
LOXL3-205ENST00000409986 PRXQ9BXM0 1461 aa27.43■■□□□ 1.98
LOXL3-205ENST00000409986 CEP162Q5TB80 1403 aa27.42■■□□□ 1.98
LOXL3-205ENST00000409986 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
LOXL3-205ENST00000409986 ABCA10Q8WWZ4 1543 aa27.34■■□□□ 1.97
LOXL3-205ENST00000409986 IGF1RP08069 1367 aa27.34■■□□□ 1.97
LOXL3-205ENST00000409986 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
LOXL3-205ENST00000409986 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
LOXL3-205ENST00000409986 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
LOXL3-205ENST00000409986 CARMIL1Q5VZK9 1371 aa27.17■■□□□ 1.94
LOXL3-205ENST00000409986 CLIP1P30622 1438 aa27.15■■□□□ 1.94
LOXL3-205ENST00000409986 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.93
LOXL3-205ENST00000409986 TDRD9Q8NDG6 1382 aaKnown RBP27.13■■□□□ 1.93
LOXL3-205ENST00000409986 WDR62O43379 1518 aa27.12■■□□□ 1.93
LOXL3-205ENST00000409986 ERCC6Q03468 1493 aa27.1■■□□□ 1.93
LOXL3-205ENST00000409986 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
LOXL3-205ENST00000409986 RANGAP1P46060 587 aaPredicted RBP27.06■■□□□ 1.92
LOXL3-205ENST00000409986 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
LOXL3-205ENST00000409986 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
LOXL3-205ENST00000409986 CUL7Q14999 1698 aa27■■□□□ 1.91
LOXL3-205ENST00000409986 IFT140Q96RY7 1462 aa26.94■■□□□ 1.9
LOXL3-205ENST00000409986 VPS8Q8N3P4 1428 aa26.93■■□□□ 1.9
LOXL3-205ENST00000409986 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.9
LOXL3-205ENST00000409986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.91■■□□□ 1.9
LOXL3-205ENST00000409986 ARAP1Q96P48 1450 aa26.91■■□□□ 1.9
LOXL3-205ENST00000409986 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.9
LOXL3-205ENST00000409986 ARHGAP35Q9NRY4 1499 aa26.87■■□□□ 1.89
LOXL3-205ENST00000409986 CCER1Q8TC90 406 aaPredicted RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms