RNA–Protein interactions for RNA: ENST00000409660.5

LNPK-203, Transcript of lunapark, ER junction formation factor, humanhuman

TSL 1 (best)

Gene LNPK, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNPK-203ENST00000409660 NISCHQ9Y2I1 1504 aa54.97■■■■■ 6.39
LNPK-203ENST00000409660 CCDC180Q9P1Z9 1646 aa47.35■■■■■ 5.17
LNPK-203ENST00000409660 ZCCHC6Q5VYS8 1495 aaKnown RBP46.44■■■■■ 5.02
LNPK-203ENST00000409660 SHROOM4Q9ULL8 1493 aa45.68■■■■■ 4.9
LNPK-203ENST00000409660 DCAF1Q9Y4B6 1507 aa45.5■■■■■ 4.87
LNPK-203ENST00000409660 DCAF8L2P0C7V8 631 aa44.99■■■■■ 4.79
LNPK-203ENST00000409660 ABCC9O60706 1549 aa44.85■■■■■ 4.77
LNPK-203ENST00000409660 SUPT5HO00267 1087 aaKnown RBP44.62■■■■■ 4.73
LNPK-203ENST00000409660 MYO15BQ96JP2 1530 aa44.5■■■■■ 4.71
LNPK-203ENST00000409660 NACADO15069 1562 aa43.83■■■■■ 4.61
LNPK-203ENST00000409660 SCRIBQ14160 1630 aa43.7■■■■■ 4.59
LNPK-203ENST00000409660 RB1CC1Q8TDY2 1594 aa43.48■■■■■ 4.55
LNPK-203ENST00000409660 CHIC1Q5VXU3 224 aa43.38■■■■■ 4.54
LNPK-203ENST00000409660 RSF1Q96T23 1441 aaPredicted RBP43.12■■■■■ 4.49
LNPK-203ENST00000409660 UNC13AQ9UPW8 1703 aa42.6■■■■■ 4.41
LNPK-203ENST00000409660 CECR2Q9BXF3 1484 aa42.57■■■■■ 4.41
LNPK-203ENST00000409660 MROH2BQ7Z745 1585 aa42.49■■■■■ 4.39
LNPK-203ENST00000409660 BAZ1AQ9NRL2 1556 aaPredicted RBP42.38■■■■■ 4.37
LNPK-203ENST00000409660 WIZO95785 1651 aa42.2■■■■■ 4.35
LNPK-203ENST00000409660 BICRAQ9NZM4 1560 aa42.17■■■■■ 4.34
LNPK-203ENST00000409660 PABPN1Q86U42 306 aaKnown RBP eCLIP42.09■■■■■ 4.33
LNPK-203ENST00000409660 SMARCA4P51532 1647 aa41.99■■■■■ 4.31
LNPK-203ENST00000409660 TRIM41Q8WV44 630 aa41.91■■■■■ 4.3
LNPK-203ENST00000409660 TOP2AP11388 1531 aaKnown RBP41.84■■■■■ 4.29
LNPK-203ENST00000409660 LOC105371045A0A1W2PR82 267 aa41.73■■■■■ 4.27
LNPK-203ENST00000409660 EIF4G1Q04637 1599 aaKnown RBP41.63■■■■■ 4.25
LNPK-203ENST00000409660 SMARCA2P51531 1590 aa41.47■■■■■ 4.23
LNPK-203ENST00000409660 PEG3Q9GZU2 1588 aa41.44■■■■■ 4.22
LNPK-203ENST00000409660 CCDC88BA6NC98 1476 aa41.43■■■■■ 4.22
LNPK-203ENST00000409660 PCGF6Q9BYE7 350 aa41.2■■■■■ 4.19
LNPK-203ENST00000409660 FAM9AQ8IZU1 332 aaPredicted RBP41.11■■■■■ 4.17
LNPK-203ENST00000409660 HRCP23327 699 aa41.08■■■■■ 4.17
LNPK-203ENST00000409660 ATAD2BQ9ULI0 1458 aa40.99■■■■■ 4.15
LNPK-203ENST00000409660 TRIM26Q12899 539 aaPredicted RBP40.95■■■■■ 4.15
LNPK-203ENST00000409660 ABCC8Q09428 1581 aa40.92■■■■■ 4.14
LNPK-203ENST00000409660 BAZ1BQ9UIG0 1483 aaKnown RBP40.85■■■■■ 4.13
LNPK-203ENST00000409660 EEA1Q15075 1411 aa40.74■■■■■ 4.11
LNPK-203ENST00000409660 CC2D2AQ9P2K1 1620 aa40.59■■■■■ 4.09
LNPK-203ENST00000409660 WRNQ14191 1432 aaPredicted RBP eCLIP40.58■■■■■ 4.09
LNPK-203ENST00000409660 HMGXB3Q12766 1538 aa40.5■■■■■ 4.07
LNPK-203ENST00000409660 NCAPD3P42695 1498 aa40.44■■■■■ 4.06
LNPK-203ENST00000409660 EHMT2Q96KQ7 1210 aa40.44■■■■■ 4.06
LNPK-203ENST00000409660 SOGA1O94964 1423 aa40.44■■■■■ 4.06
LNPK-203ENST00000409660 CSRNP3Q8WYN3 585 aa40.33■■■■■ 4.05
LNPK-203ENST00000409660 DNAJC5BQ9UF47 199 aa40.32■■■■■ 4.05
LNPK-203ENST00000409660 SYNJ1O43426 1573 aa40.32■■■■■ 4.04
LNPK-203ENST00000409660 TNIKQ9UKE5 1360 aa40.3■■■■■ 4.04
LNPK-203ENST00000409660 GOLGA3Q08378 1498 aa40.18■■■■■ 4.02
LNPK-203ENST00000409660 RUSC2Q8N2Y8 1516 aa40.18■■■■■ 4.02
LNPK-203ENST00000409660 CEP162Q5TB80 1403 aa40.15■■■■■ 4.02
LNPK-203ENST00000409660 TOP2BQ02880 1626 aa40.09■■■■■ 4.01
LNPK-203ENST00000409660 KIF21BO75037 1637 aa40.08■■■■■ 4.01
LNPK-203ENST00000409660 CEP164Q9UPV0 1460 aa40.06■■■■■ 4
LNPK-203ENST00000409660 ZEB1P37275 1124 aaPredicted RBP40.06■■■■■ 4
LNPK-203ENST00000409660 BIVM-ERCC5R4GMW8 1640 aa40.03■■■■■ 4
LNPK-203ENST00000409660 UBTFP17480 764 aaKnown RBP39.92■■■■□ 3.98
LNPK-203ENST00000409660 CFTRP13569 1480 aa39.89■■■■□ 3.98
LNPK-203ENST00000409660 PPARGC1BQ86YN6 1023 aaKnown RBP39.81■■■■□ 3.96
LNPK-203ENST00000409660 PRDM2Q13029 1718 aa39.74■■■■□ 3.95
LNPK-203ENST00000409660 CUX1P39880 1505 aa39.65■■■■□ 3.94
LNPK-203ENST00000409660 ERICH3Q5RHP9 1530 aa39.6■■■■□ 3.93
LNPK-203ENST00000409660 RAPGEF2Q9Y4G8 1499 aa39.57■■■■□ 3.93
LNPK-203ENST00000409660 CLIP1P30622 1438 aa39.56■■■■□ 3.92
LNPK-203ENST00000409660 CADPSQ9ULU8 1353 aa39.5■■■■□ 3.91
LNPK-203ENST00000409660 PRXQ9BXM0 1461 aa39.49■■■■□ 3.91
LNPK-203ENST00000409660 KIF27Q86VH2 1401 aa39.47■■■■□ 3.91
LNPK-203ENST00000409660 VPS8Q8N3P4 1428 aa39.41■■■■□ 3.9
LNPK-203ENST00000409660 APLP2Q06481 763 aa39.11■■■■□ 3.85
LNPK-203ENST00000409660 CCER1Q8TC90 406 aaPredicted RBP39.11■■■■□ 3.85
LNPK-203ENST00000409660 NESP48681 1621 aa39.1■■■■□ 3.85
LNPK-203ENST00000409660 TTBK1Q5TCY1 1321 aaPredicted RBP39.07■■■■□ 3.85
LNPK-203ENST00000409660 LAMC3Q9Y6N6 1575 aa39.06■■■■□ 3.84
LNPK-203ENST00000409660 FANCD2Q9BXW9 1451 aa39.06■■■■□ 3.84
LNPK-203ENST00000409660 FGD5Q6ZNL6 1462 aa39.04■■■■□ 3.84
LNPK-203ENST00000409660 CUX2O14529 1486 aa39.04■■■■□ 3.84
LNPK-203ENST00000409660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.04■■■■□ 3.84
LNPK-203ENST00000409660 ARAP1Q96P48 1450 aa38.98■■■■□ 3.83
LNPK-203ENST00000409660 IGF1RP08069 1367 aa38.95■■■■□ 3.83
LNPK-203ENST00000409660 DNMBPQ6XZF7 1577 aa38.95■■■■□ 3.83
LNPK-203ENST00000409660 RANGAP1P46060 587 aaPredicted RBP38.82■■■■□ 3.81
LNPK-203ENST00000409660 CARMIL1Q5VZK9 1371 aa38.8■■■■□ 3.8
LNPK-203ENST00000409660 TOPBP1Q92547 1522 aa38.77■■■■□ 3.8
LNPK-203ENST00000409660 PDS5BQ9NTI5 1447 aa38.76■■■■□ 3.8
LNPK-203ENST00000409660 ARHGAP35Q9NRY4 1499 aa38.76■■■■□ 3.79
LNPK-203ENST00000409660 ABCA10Q8WWZ4 1543 aa38.75■■■■□ 3.79
LNPK-203ENST00000409660 POLA1P09884 1462 aaPredicted RBP38.67■■■■□ 3.78
LNPK-203ENST00000409660 KIF21AQ7Z4S6 1674 aa38.66■■■■□ 3.78
LNPK-203ENST00000409660 CUL7Q14999 1698 aa38.57■■■■□ 3.77
LNPK-203ENST00000409660 ERCC6Q03468 1493 aa38.55■■■■□ 3.76
LNPK-203ENST00000409660 MAP3K1Q13233 1512 aa38.54■■■■□ 3.76
LNPK-203ENST00000409660 RAD54L2Q9Y4B4 1467 aa38.53■■■■□ 3.76
LNPK-203ENST00000409660 HNRNPUL2Q1KMD3 747 aaKnown RBP38.52■■■■□ 3.76
LNPK-203ENST00000409660 URB2Q14146 1524 aaKnown RBP38.47■■■■□ 3.75
LNPK-203ENST00000409660 WDR97A6NE52 1622 aa38.47■■■■□ 3.75
LNPK-203ENST00000409660 RRBP1Q9P2E9 1410 aaKnown RBP38.45■■■■□ 3.75
LNPK-203ENST00000409660 KANK4Q5T7N3 995 aaPredicted RBP38.42■■■■□ 3.74
LNPK-203ENST00000409660 FHAD1B1AJZ9 1412 aa38.41■■■■□ 3.74
LNPK-203ENST00000409660 EFCAB5A4FU69 1503 aa38.36■■■■□ 3.73
LNPK-203ENST00000409660 TIAM1Q13009 1591 aa38.34■■■■□ 3.73
LNPK-203ENST00000409660 MRC2Q9UBG0 1479 aa38.32■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms