RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SF3B4Q15427 424 aaKnown RBP eCLIP11.54□□□□□ -0.561e-19■■■■■ 49.9
SHANK2-203ENST00000409161 PRPF4O43172 522 aaKnown RBP eCLIP12.78□□□□□ -0.362e-13■■□□□ 12.7
SHANK2-203ENST00000409161 TIA1P31483 386 aaKnown RBP eCLIP11.61□□□□□ -0.551e-10■■■■□ 19.7
SHANK2-203ENST00000409161 MATR3P43243 847 aaKnown RBP eCLIP14.08□□□□□ -0.163e-9■■■□□ 18.4
SHANK2-203ENST00000409161 SRSF7Q16629 238 aaKnown RBP eCLIP10.22□□□□□ -0.774e-9■■■■■ 29.7
SHANK2-203ENST00000409161 HNRNPMP52272 730 aaKnown RBP eCLIP14.22□□□□□ -0.134e-9■■■■■ 39.3
SHANK2-203ENST00000409161 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.86□□□□□ -0.675e-9■■■□□ 18.5
SHANK2-203ENST00000409161 HNRNPLP14866 589 aaKnown RBP eCLIP12.04□□□□□ -0.481e-8■■■■■ 37.6
SHANK2-203ENST00000409161 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.34□□□□□ -0.594e-8■■■■■ 28.9
SHANK2-203ENST00000409161 EIF3HO15372 352 aaKnown RBP eCLIP12.85□□□□□ -0.354e-8■■□□□ 11.4
SHANK2-203ENST00000409161 ILF3Q12906 894 aaKnown RBP eCLIP12.07□□□□□ -0.485e-8■■■■□ 23.8
SHANK2-203ENST00000409161 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.65□□□□□ -0.75e-8■■□□□ 12.9
SHANK2-203ENST00000409161 PPIGQ13427 754 aaKnown RBP eCLIP11.63□□□□□ -0.555e-8■□□□□ 10.7
SHANK2-203ENST00000409161 PTBP1P26599 531 aaKnown RBP eCLIP11.46□□□□□ -0.577e-8■■■■□ 24.5
SHANK2-203ENST00000409161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■■■□□ 18.9
SHANK2-203ENST00000409161 QKIQ96PU8 341 aaKnown RBP eCLIP12.72□□□□□ -0.372e-7■■■■■ 30.5
SHANK2-203ENST00000409161 AGGF1Q8N302 714 aaeCLIP12.93□□□□□ -0.342e-7■■■■■ 29
SHANK2-203ENST00000409161 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.93□□□□□ -0.343e-7■□□□□ 9.7
SHANK2-203ENST00000409161 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.97□□□□□ -0.334e-7■■■□□ 19
SHANK2-203ENST00000409161 TIAL1Q01085 375 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■■■■■ 58.4
SHANK2-203ENST00000409161 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.245e-7■■■■■ 27.6
SHANK2-203ENST00000409161 KHSRPQ92945 711 aaKnown RBP eCLIP11.34□□□□□ -0.596e-7■■■□□ 16.4
SHANK2-203ENST00000409161 PCBP2Q15366 365 aaKnown RBP eCLIP11.53□□□□□ -0.567e-7■■■■□ 24.6
SHANK2-203ENST00000409161 GTF2F1P35269 517 aaKnown RBP eCLIP14.01□□□□□ -0.177e-7■■■■■ 30.9
SHANK2-203ENST00000409161 NKRFO15226 690 aaKnown RBP eCLIP12.22□□□□□ -0.458e-7■■■□□ 18.4
SHANK2-203ENST00000409161 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.528e-7■■■■□ 23
SHANK2-203ENST00000409161 RBFOX2O43251 390 aaKnown RBP eCLIP10.73□□□□□ -0.698e-7■■■□□ 16.8
SHANK2-203ENST00000409161 CSTF2P33240 577 aaKnown RBP eCLIP11.97□□□□□ -0.499e-7■■■■□ 22.9
SHANK2-203ENST00000409161 EFTUD2Q15029 972 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■■□□ 15.8
SHANK2-203ENST00000409161 CDC40O60508 579 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■□□□ 13.8
SHANK2-203ENST00000409161 HLTFQ14527 1009 aaKnown RBP eCLIP14.04□□□□□ -0.161e-6■■■□□ 17.8
SHANK2-203ENST00000409161 YBX3P16989 372 aaKnown RBP eCLIP12.15□□□□□ -0.461e-6■■■□□ 16.3
SHANK2-203ENST00000409161 DKC1O60832 514 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■■■■■ 39.3
SHANK2-203ENST00000409161 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■■■□□ 16.3
SHANK2-203ENST00000409161 FUSP35637 526 aaKnown RBP eCLIP9.85□□□□□ -0.831e-6■■■□□ 17.1
SHANK2-203ENST00000409161 EIF3DO15371 548 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■□□□□ 11
SHANK2-203ENST00000409161 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■■■■□ 20.4
SHANK2-203ENST00000409161 NCBP2P52298 156 aaKnown RBP eCLIP11.86□□□□□ -0.512e-6■■■■□ 22.6
SHANK2-203ENST00000409161 FXR2P51116 673 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■□□□ 11.8
SHANK2-203ENST00000409161 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.67□□□□□ -0.542e-6■■□□□ 13.9
SHANK2-203ENST00000409161 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■■■□ 21.1
SHANK2-203ENST00000409161 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.15□□□□□ -0.462e-6■■□□□ 13.4
SHANK2-203ENST00000409161 HNRNPKP61978 463 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■■□□ 17.9
SHANK2-203ENST00000409161 SFPQP23246 707 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■□□□ 14.2
SHANK2-203ENST00000409161 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■■■■■ 57.2
SHANK2-203ENST00000409161 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.32□□□□□ -0.443e-6■□□□□ 11
SHANK2-203ENST00000409161 TROVE2P10155 538 aaKnown RBP eCLIP13.54□□□□□ -0.243e-6■■□□□ 11.8
SHANK2-203ENST00000409161 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.22□□□□□ -0.293e-6■■■■■ 34.3
SHANK2-203ENST00000409161 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.06□□□□□ -0.483e-6■■■■□ 22.6
SHANK2-203ENST00000409161 LARP4Q71RC2 724 aaKnown RBP eCLIP11.41□□□□□ -0.583e-6■□□□□ 9.6
SHANK2-203ENST00000409161 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14□□□□□ -0.174e-6■□□□□ 8.1
SHANK2-203ENST00000409161 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.316e-6■□□□□ 10.9
SHANK2-203ENST00000409161 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.266e-6■■■□□ 19.1
SHANK2-203ENST00000409161 BCCIPQ9P287 314 aaKnown RBP eCLIP14.03□□□□□ -0.167e-6■■■■□ 19.3
SHANK2-203ENST00000409161 RBM22Q9NW64 420 aaKnown RBP eCLIP12.27□□□□□ -0.458e-6■□□□□ 10.3
Retrieved 55 of 55 RNA–protein pairs in 9.4 ms