RNA–Protein interactions for RNA: ENST00000407439.7

MRE11-204, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2 BASIC

Gene MRE11, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-204ENST00000407439 NISCHQ9Y2I1 1504 aa13.96□□□□□ -0.18
MRE11-204ENST00000407439 CHIC1Q5VXU3 224 aa12.88□□□□□ -0.35
MRE11-204ENST00000407439 AEBP2Q6ZN18 517 aaPredicted RBP12.68□□□□□ -0.38
MRE11-204ENST00000407439 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
MRE11-204ENST00000407439 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
MRE11-204ENST00000407439 DCAF1Q9Y4B6 1507 aa11.57□□□□□ -0.56
MRE11-204ENST00000407439 SHROOM4Q9ULL8 1493 aa11.52□□□□□ -0.57
MRE11-204ENST00000407439 PHF23Q9BUL5 403 aaPredicted RBP11.45□□□□□ -0.58
MRE11-204ENST00000407439 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
MRE11-204ENST00000407439 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
MRE11-204ENST00000407439 SUPT5HO00267 1087 aaKnown RBP11.21□□□□□ -0.62
MRE11-204ENST00000407439 NACADO15069 1562 aa11.17□□□□□ -0.62
MRE11-204ENST00000407439 ABCC9O60706 1549 aa11.15□□□□□ -0.63
MRE11-204ENST00000407439 SCRIBQ14160 1630 aa11.1□□□□□ -0.63
MRE11-204ENST00000407439 RB1CC1Q8TDY2 1594 aa11□□□□□ -0.65
MRE11-204ENST00000407439 RSF1Q96T23 1441 aaPredicted RBP10.93□□□□□ -0.66
MRE11-204ENST00000407439 CECR2Q9BXF3 1484 aa10.82□□□□□ -0.68
MRE11-204ENST00000407439 MROH2BQ7Z745 1585 aa10.78□□□□□ -0.68
MRE11-204ENST00000407439 BAZ1AQ9NRL2 1556 aaPredicted RBP10.76□□□□□ -0.69
MRE11-204ENST00000407439 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
MRE11-204ENST00000407439 PLPPR3Q6T4P5 718 aa10.72□□□□□ -0.69
MRE11-204ENST00000407439 WIZO95785 1651 aa10.69□□□□□ -0.7
MRE11-204ENST00000407439 BICRAQ9NZM4 1560 aa10.67□□□□□ -0.7
MRE11-204ENST00000407439 SMARCA4P51532 1647 aa10.67□□□□□ -0.7
MRE11-204ENST00000407439 TOP2AP11388 1531 aaKnown RBP10.61□□□□□ -0.71
MRE11-204ENST00000407439 SENP3Q9H4L4 574 aaPredicted RBP10.58□□□□□ -0.72
MRE11-204ENST00000407439 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
MRE11-204ENST00000407439 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
MRE11-204ENST00000407439 PABPN1Q86U42 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
MRE11-204ENST00000407439 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
MRE11-204ENST00000407439 SMARCA2P51531 1590 aa10.52□□□□□ -0.73
MRE11-204ENST00000407439 CCDC88BA6NC98 1476 aa10.5□□□□□ -0.73
MRE11-204ENST00000407439 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
MRE11-204ENST00000407439 ATAD2BQ9ULI0 1458 aa10.44□□□□□ -0.74
MRE11-204ENST00000407439 BAZ1BQ9UIG0 1483 aaKnown RBP10.39□□□□□ -0.75
MRE11-204ENST00000407439 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
MRE11-204ENST00000407439 HMGXB3Q12766 1538 aa10.33□□□□□ -0.76
MRE11-204ENST00000407439 NCAPD3P42695 1498 aa10.32□□□□□ -0.76
MRE11-204ENST00000407439 FAM9AQ8IZU1 332 aaPredicted RBP10.31□□□□□ -0.76
MRE11-204ENST00000407439 WRNQ14191 1432 aaPredicted RBP eCLIP10.28□□□□□ -0.76
MRE11-204ENST00000407439 EEA1Q15075 1411 aa10.28□□□□□ -0.76
MRE11-204ENST00000407439 PCGF6Q9BYE7 350 aa10.24□□□□□ -0.77
MRE11-204ENST00000407439 SOGA1O94964 1423 aa10.22□□□□□ -0.77
MRE11-204ENST00000407439 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
MRE11-204ENST00000407439 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
MRE11-204ENST00000407439 HRCP23327 699 aa10.17□□□□□ -0.78
MRE11-204ENST00000407439 TOP2BQ02880 1626 aa10.16□□□□□ -0.78
MRE11-204ENST00000407439 CFTRP13569 1480 aa10.16□□□□□ -0.78
MRE11-204ENST00000407439 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
MRE11-204ENST00000407439 RUSC2Q8N2Y8 1516 aa10.15□□□□□ -0.78
MRE11-204ENST00000407439 TNIKQ9UKE5 1360 aa10.15□□□□□ -0.78
MRE11-204ENST00000407439 EHMT2Q96KQ7 1210 aa10.14□□□□□ -0.79
MRE11-204ENST00000407439 BIVM-ERCC5R4GMW8 1640 aa10.13□□□□□ -0.79
MRE11-204ENST00000407439 GOLGA3Q08378 1498 aa10.13□□□□□ -0.79
MRE11-204ENST00000407439 ADRA2BP18089 450 aa10.12□□□□□ -0.79
MRE11-204ENST00000407439 KIF21BO75037 1637 aa10.12□□□□□ -0.79
MRE11-204ENST00000407439 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
MRE11-204ENST00000407439 CEP164Q9UPV0 1460 aa10.11□□□□□ -0.79
MRE11-204ENST00000407439 CC2D2AQ9P2K1 1620 aa10.1□□□□□ -0.79
MRE11-204ENST00000407439 PRDM2Q13029 1718 aa10.08□□□□□ -0.8
MRE11-204ENST00000407439 CUX1P39880 1505 aa10.07□□□□□ -0.8
MRE11-204ENST00000407439 CADPSQ9ULU8 1353 aa10.06□□□□□ -0.8
MRE11-204ENST00000407439 KCNA4P22459 653 aa10.06□□□□□ -0.8
MRE11-204ENST00000407439 UBTFP17480 764 aaKnown RBP10.03□□□□□ -0.8
MRE11-204ENST00000407439 ERICH3Q5RHP9 1530 aa10.01□□□□□ -0.81
MRE11-204ENST00000407439 RAPGEF2Q9Y4G8 1499 aa10.01□□□□□ -0.81
MRE11-204ENST00000407439 PRXQ9BXM0 1461 aa10.01□□□□□ -0.81
MRE11-204ENST00000407439 KIF27Q86VH2 1401 aa10□□□□□ -0.81
MRE11-204ENST00000407439 CLIP1P30622 1438 aa9.97□□□□□ -0.81
MRE11-204ENST00000407439 FANCD2Q9BXW9 1451 aa9.95□□□□□ -0.82
MRE11-204ENST00000407439 PPP6R1Q9UPN7 881 aa9.94□□□□□ -0.82
MRE11-204ENST00000407439 VPS8Q8N3P4 1428 aa9.93□□□□□ -0.82
MRE11-204ENST00000407439 ZEB1P37275 1124 aaPredicted RBP9.92□□□□□ -0.82
MRE11-204ENST00000407439 FGD5Q6ZNL6 1462 aa9.92□□□□□ -0.82
MRE11-204ENST00000407439 LAMC3Q9Y6N6 1575 aa9.91□□□□□ -0.82
MRE11-204ENST00000407439 PPARGC1BQ86YN6 1023 aaKnown RBP9.91□□□□□ -0.82
MRE11-204ENST00000407439 DNMBPQ6XZF7 1577 aa9.9□□□□□ -0.82
MRE11-204ENST00000407439 CUX2O14529 1486 aa9.9□□□□□ -0.82
MRE11-204ENST00000407439 IGF1RP08069 1367 aa9.88□□□□□ -0.83
MRE11-204ENST00000407439 NESP48681 1621 aa9.87□□□□□ -0.83
MRE11-204ENST00000407439 TOPBP1Q92547 1522 aa9.87□□□□□ -0.83
MRE11-204ENST00000407439 ABCA10Q8WWZ4 1543 aa9.86□□□□□ -0.83
MRE11-204ENST00000407439 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
MRE11-204ENST00000407439 ARAP1Q96P48 1450 aa9.85□□□□□ -0.83
MRE11-204ENST00000407439 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
MRE11-204ENST00000407439 CARMIL1Q5VZK9 1371 aa9.83□□□□□ -0.84
MRE11-204ENST00000407439 URB2Q14146 1524 aaKnown RBP9.81□□□□□ -0.84
MRE11-204ENST00000407439 FOXD1Q16676 465 aa9.8□□□□□ -0.84
MRE11-204ENST00000407439 ARHGAP35Q9NRY4 1499 aa9.8□□□□□ -0.84
MRE11-204ENST00000407439 APLP2Q06481 763 aa9.79□□□□□ -0.84
MRE11-204ENST00000407439 RAD54L2Q9Y4B4 1467 aa9.79□□□□□ -0.84
MRE11-204ENST00000407439 TTBK1Q5TCY1 1321 aaPredicted RBP9.78□□□□□ -0.84
MRE11-204ENST00000407439 WDR97A6NE52 1622 aa9.78□□□□□ -0.84
MRE11-204ENST00000407439 CUL7Q14999 1698 aa9.77□□□□□ -0.84
MRE11-204ENST00000407439 RANGAP1P46060 587 aaPredicted RBP9.76□□□□□ -0.85
MRE11-204ENST00000407439 DNAJC5BQ9UF47 199 aa9.76□□□□□ -0.85
MRE11-204ENST00000407439 ABCA5Q8WWZ7 1642 aa9.75□□□□□ -0.85
MRE11-204ENST00000407439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.74□□□□□ -0.85
MRE11-204ENST00000407439 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
MRE11-204ENST00000407439 CCER1Q8TC90 406 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms