RNA–Protein interactions for RNA: ENST00000406772.5

GGA1-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2 BASIC

Gene GGA1, Length 3,205 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-206ENST00000406772 NISCHQ9Y2I1 1504 aa28.05■■■□□ 2.08
GGA1-206ENST00000406772 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
GGA1-206ENST00000406772 SUPT5HO00267 1087 aaKnown RBP25.44■■□□□ 1.66
GGA1-206ENST00000406772 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
GGA1-206ENST00000406772 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
GGA1-206ENST00000406772 HRCP23327 699 aa24.59■■□□□ 1.53
GGA1-206ENST00000406772 PPARGC1BQ86YN6 1023 aaKnown RBP24.55■■□□□ 1.52
GGA1-206ENST00000406772 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
GGA1-206ENST00000406772 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
GGA1-206ENST00000406772 LOC105371045A0A1W2PR82 267 aa24.14■■□□□ 1.46
GGA1-206ENST00000406772 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
GGA1-206ENST00000406772 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
GGA1-206ENST00000406772 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.38
GGA1-206ENST00000406772 TRIM26Q12899 539 aaPredicted RBP23.61■■□□□ 1.37
GGA1-206ENST00000406772 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
GGA1-206ENST00000406772 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
GGA1-206ENST00000406772 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
GGA1-206ENST00000406772 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
GGA1-206ENST00000406772 ZEB1P37275 1124 aaPredicted RBP23.18■■□□□ 1.3
GGA1-206ENST00000406772 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
GGA1-206ENST00000406772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.04■■□□□ 1.28
GGA1-206ENST00000406772 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
GGA1-206ENST00000406772 CCER1Q8TC90 406 aaPredicted RBP22.97■■□□□ 1.27
GGA1-206ENST00000406772 NEUROD1Q13562 356 aa22.78■■□□□ 1.24
GGA1-206ENST00000406772 YTHDC1Q96MU7 727 aaKnown RBP22.72■■□□□ 1.23
GGA1-206ENST00000406772 GTF3C3Q9Y5Q9 886 aa22.72■■□□□ 1.23
GGA1-206ENST00000406772 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
GGA1-206ENST00000406772 DIEXFQ68CQ4 756 aaKnown RBP22.65■■□□□ 1.22
GGA1-206ENST00000406772 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
GGA1-206ENST00000406772 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
GGA1-206ENST00000406772 CENPBP07199 599 aaPredicted RBP22.59■■□□□ 1.21
GGA1-206ENST00000406772 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.2
GGA1-206ENST00000406772 ABCC9O60706 1549 aa22.44■■□□□ 1.18
GGA1-206ENST00000406772 UBTFP17480 764 aaKnown RBP22.34■■□□□ 1.17
GGA1-206ENST00000406772 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
GGA1-206ENST00000406772 HNRNPUL2Q1KMD3 747 aaKnown RBP22.3■■□□□ 1.16
GGA1-206ENST00000406772 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
GGA1-206ENST00000406772 ZNF316A6NFI3 1004 aaPredicted RBP22.16■■□□□ 1.14
GGA1-206ENST00000406772 MIER1Q8N108 512 aa22.11■■□□□ 1.13
GGA1-206ENST00000406772 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
GGA1-206ENST00000406772 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
GGA1-206ENST00000406772 WIZO95785 1651 aa21.97■■□□□ 1.11
GGA1-206ENST00000406772 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
GGA1-206ENST00000406772 APLP2Q06481 763 aa21.93■■□□□ 1.1
GGA1-206ENST00000406772 MYT1Q01538 1121 aa21.9■■□□□ 1.1
GGA1-206ENST00000406772 SOGA1O94964 1423 aa21.9■■□□□ 1.1
GGA1-206ENST00000406772 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.1
GGA1-206ENST00000406772 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
GGA1-206ENST00000406772 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.07
GGA1-206ENST00000406772 ITGAEP38570 1179 aa21.72■■□□□ 1.07
GGA1-206ENST00000406772 TNIKQ9UKE5 1360 aa21.68■■□□□ 1.06
GGA1-206ENST00000406772 BCANQ96GW7 911 aa21.67■■□□□ 1.06
GGA1-206ENST00000406772 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.062e-8■■■□□ 14.7
GGA1-206ENST00000406772 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
GGA1-206ENST00000406772 NACADO15069 1562 aa21.54■■□□□ 1.04
GGA1-206ENST00000406772 SUPT16HQ9Y5B9 1047 aaKnown RBP21.51■■□□□ 1.03
GGA1-206ENST00000406772 BAZ1AQ9NRL2 1556 aaPredicted RBP21.51■■□□□ 1.03
GGA1-206ENST00000406772 CLIP1P30622 1438 aa21.5■■□□□ 1.03
GGA1-206ENST00000406772 GOLGA3Q08378 1498 aa21.5■■□□□ 1.03
GGA1-206ENST00000406772 KCNH8Q96L42 1107 aa21.42■■□□□ 1.02
GGA1-206ENST00000406772 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
GGA1-206ENST00000406772 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1.01
GGA1-206ENST00000406772 EEA1Q15075 1411 aa21.33■■□□□ 1.01
GGA1-206ENST00000406772 SMARCA2P51531 1590 aa21.32■■□□□ 1
GGA1-206ENST00000406772 HIRIP3Q9BW71 556 aaPredicted RBP21.32■■□□□ 1
GGA1-206ENST00000406772 TSHZ2Q9NRE2 1034 aa21.31■■□□□ 1
GGA1-206ENST00000406772 KANK4Q5T7N3 995 aaPredicted RBP21.3■■□□□ 1
GGA1-206ENST00000406772 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
GGA1-206ENST00000406772 FKBP8Q14318 412 aa21.29■■□□□ 1
GGA1-206ENST00000406772 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
GGA1-206ENST00000406772 VPS8Q8N3P4 1428 aa21.26■□□□□ 0.99
GGA1-206ENST00000406772 DDX10Q13206 875 aaKnown RBP21.25■□□□□ 0.99
GGA1-206ENST00000406772 RAPGEF2Q9Y4G8 1499 aa21.23■□□□□ 0.99
GGA1-206ENST00000406772 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
GGA1-206ENST00000406772 DHX57Q6P158 1386 aaKnown RBP21.2■□□□□ 0.98
GGA1-206ENST00000406772 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
GGA1-206ENST00000406772 NEFLP07196 543 aa21.16■□□□□ 0.98
GGA1-206ENST00000406772 ANP32EQ9BTT0 268 aa21.16■□□□□ 0.98
GGA1-206ENST00000406772 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
GGA1-206ENST00000406772 SIN3AQ96ST3 1273 aa21.1■□□□□ 0.97
GGA1-206ENST00000406772 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
GGA1-206ENST00000406772 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
GGA1-206ENST00000406772 CLSPNQ9HAW4 1339 aa21.04■□□□□ 0.96
GGA1-206ENST00000406772 IRX6P78412 446 aaPredicted RBP21.02■□□□□ 0.96
GGA1-206ENST00000406772 KIF21BO75037 1637 aa21.02■□□□□ 0.95
GGA1-206ENST00000406772 BCL11AQ9H165 835 aa20.98■□□□□ 0.95
GGA1-206ENST00000406772 CCNB3Q8WWL7 1395 aa20.92■□□□□ 0.94
GGA1-206ENST00000406772 RBM19Q9Y4C8 960 aaKnown RBP20.91■□□□□ 0.94
GGA1-206ENST00000406772 ANP32CO43423 234 aa20.91■□□□□ 0.94
GGA1-206ENST00000406772 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
GGA1-206ENST00000406772 ERICH6Q7L0X2 663 aa20.9■□□□□ 0.94
GGA1-206ENST00000406772 RAB3GAP2Q9H2M9 1393 aa20.9■□□□□ 0.94
GGA1-206ENST00000406772 UNC13AQ9UPW8 1703 aa20.88■□□□□ 0.93
GGA1-206ENST00000406772 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
GGA1-206ENST00000406772 ARAP1Q96P48 1450 aa20.83■□□□□ 0.92
GGA1-206ENST00000406772 HNRNPUQ00839 825 aaKnown RBP eCLIP20.79■□□□□ 0.92
GGA1-206ENST00000406772 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
GGA1-206ENST00000406772 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
GGA1-206ENST00000406772 SENP3-EIF4A1A0A087X0R7 540 aa20.69■□□□□ 0.9
GGA1-206ENST00000406772 RRBP1Q9P2E9 1410 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms