RNA–Protein interactions for RNA: ENST00000404006.5

RNF216P1-202, Transcript of ring finger protein 216 pseudogene 1, humanhuman

TSL 1 (best)

Gene RNF216P1, Length 2,201 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216P1-202ENST00000404006 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
RNF216P1-202ENST00000404006 CCDC180Q9P1Z9 1646 aa25.95■■□□□ 1.74
RNF216P1-202ENST00000404006 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
RNF216P1-202ENST00000404006 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
RNF216P1-202ENST00000404006 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
RNF216P1-202ENST00000404006 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
RNF216P1-202ENST00000404006 ABCC9O60706 1549 aa24.67■■□□□ 1.54
RNF216P1-202ENST00000404006 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
RNF216P1-202ENST00000404006 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
RNF216P1-202ENST00000404006 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
RNF216P1-202ENST00000404006 NACADO15069 1562 aa24.16■■□□□ 1.46
RNF216P1-202ENST00000404006 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
RNF216P1-202ENST00000404006 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
RNF216P1-202ENST00000404006 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
RNF216P1-202ENST00000404006 CECR2Q9BXF3 1484 aa23.55■■□□□ 1.36
RNF216P1-202ENST00000404006 PABPN1Q86U42 306 aaKnown RBP eCLIP23.45■■□□□ 1.34
RNF216P1-202ENST00000404006 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.34
RNF216P1-202ENST00000404006 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
RNF216P1-202ENST00000404006 BICRAQ9NZM4 1560 aa23.29■■□□□ 1.32
RNF216P1-202ENST00000404006 WIZO95785 1651 aa23.24■■□□□ 1.31
RNF216P1-202ENST00000404006 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.31
RNF216P1-202ENST00000404006 SMARCA4P51532 1647 aa23.1■■□□□ 1.29
RNF216P1-202ENST00000404006 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
RNF216P1-202ENST00000404006 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
RNF216P1-202ENST00000404006 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
RNF216P1-202ENST00000404006 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
RNF216P1-202ENST00000404006 PEG3Q9GZU2 1588 aa22.68■■□□□ 1.22
RNF216P1-202ENST00000404006 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
RNF216P1-202ENST00000404006 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
RNF216P1-202ENST00000404006 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
RNF216P1-202ENST00000404006 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.21
RNF216P1-202ENST00000404006 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
RNF216P1-202ENST00000404006 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
RNF216P1-202ENST00000404006 EHMT2Q96KQ7 1210 aa22.39■■□□□ 1.17
RNF216P1-202ENST00000404006 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
RNF216P1-202ENST00000404006 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
RNF216P1-202ENST00000404006 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
RNF216P1-202ENST00000404006 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
RNF216P1-202ENST00000404006 SOGA1O94964 1423 aa22.1■■□□□ 1.13
RNF216P1-202ENST00000404006 SYNJ1O43426 1573 aa22.08■■□□□ 1.13
RNF216P1-202ENST00000404006 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
RNF216P1-202ENST00000404006 CFTRP13569 1480 aa21.99■■□□□ 1.11
RNF216P1-202ENST00000404006 CSRNP3Q8WYN3 585 aa21.91■■□□□ 1.1
RNF216P1-202ENST00000404006 CADPSQ9ULU8 1353 aa21.89■■□□□ 1.1
RNF216P1-202ENST00000404006 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
RNF216P1-202ENST00000404006 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
RNF216P1-202ENST00000404006 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
RNF216P1-202ENST00000404006 EEA1Q15075 1411 aa21.83■■□□□ 1.09
RNF216P1-202ENST00000404006 CUX1P39880 1505 aa21.82■■□□□ 1.08
RNF216P1-202ENST00000404006 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
RNF216P1-202ENST00000404006 UBTFP17480 764 aaKnown RBP21.78■■□□□ 1.08
RNF216P1-202ENST00000404006 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
RNF216P1-202ENST00000404006 NESP48681 1621 aa21.76■■□□□ 1.07
RNF216P1-202ENST00000404006 HRCP23327 699 aa21.75■■□□□ 1.07
RNF216P1-202ENST00000404006 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
RNF216P1-202ENST00000404006 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
RNF216P1-202ENST00000404006 GOLGA3Q08378 1498 aa21.67■■□□□ 1.06
RNF216P1-202ENST00000404006 CEP162Q5TB80 1403 aa21.65■■□□□ 1.06
RNF216P1-202ENST00000404006 TNIKQ9UKE5 1360 aa21.65■■□□□ 1.06
RNF216P1-202ENST00000404006 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
RNF216P1-202ENST00000404006 RAPGEF2Q9Y4G8 1499 aa21.6■■□□□ 1.05
RNF216P1-202ENST00000404006 TRIM26Q12899 539 aaPredicted RBP21.6■■□□□ 1.05
RNF216P1-202ENST00000404006 KIF21BO75037 1637 aa21.58■■□□□ 1.05
RNF216P1-202ENST00000404006 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
RNF216P1-202ENST00000404006 FGD5Q6ZNL6 1462 aa21.55■■□□□ 1.04
RNF216P1-202ENST00000404006 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
RNF216P1-202ENST00000404006 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
RNF216P1-202ENST00000404006 CUX2O14529 1486 aa21.5■■□□□ 1.03
RNF216P1-202ENST00000404006 TTBK1Q5TCY1 1321 aaPredicted RBP21.47■■□□□ 1.03
RNF216P1-202ENST00000404006 PRXQ9BXM0 1461 aa21.45■■□□□ 1.02
RNF216P1-202ENST00000404006 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
RNF216P1-202ENST00000404006 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
RNF216P1-202ENST00000404006 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
RNF216P1-202ENST00000404006 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
RNF216P1-202ENST00000404006 CLIP1P30622 1438 aa21.41■■□□□ 1.02
RNF216P1-202ENST00000404006 POLA1P09884 1462 aaPredicted RBP21.4■■□□□ 1.02
RNF216P1-202ENST00000404006 URB2Q14146 1524 aaKnown RBP21.4■■□□□ 1.02
RNF216P1-202ENST00000404006 KIF21AQ7Z4S6 1674 aa21.38■■□□□ 1.01
RNF216P1-202ENST00000404006 IGF1RP08069 1367 aa21.38■■□□□ 1.01
RNF216P1-202ENST00000404006 ERICH3Q5RHP9 1530 aa21.36■■□□□ 1.01
RNF216P1-202ENST00000404006 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
RNF216P1-202ENST00000404006 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
RNF216P1-202ENST00000404006 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
RNF216P1-202ENST00000404006 VPS8Q8N3P4 1428 aa21.21■□□□□ 0.99
RNF216P1-202ENST00000404006 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
RNF216P1-202ENST00000404006 ARAP1Q96P48 1450 aa21.14■□□□□ 0.97
RNF216P1-202ENST00000404006 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
RNF216P1-202ENST00000404006 APLP2Q06481 763 aa21.11■□□□□ 0.97
RNF216P1-202ENST00000404006 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
RNF216P1-202ENST00000404006 ARHGAP35Q9NRY4 1499 aa21.09■□□□□ 0.97
RNF216P1-202ENST00000404006 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
RNF216P1-202ENST00000404006 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
RNF216P1-202ENST00000404006 ABCA5Q8WWZ7 1642 aa21.06■□□□□ 0.96
RNF216P1-202ENST00000404006 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
RNF216P1-202ENST00000404006 CUL7Q14999 1698 aa21.03■□□□□ 0.96
RNF216P1-202ENST00000404006 AQRO60306 1485 aaKnown RBP eCLIP21.03■□□□□ 0.966e-7■■■□□ 18.4
RNF216P1-202ENST00000404006 ZEB1P37275 1124 aaPredicted RBP21.01■□□□□ 0.95
RNF216P1-202ENST00000404006 WDR62O43379 1518 aa20.97■□□□□ 0.95
RNF216P1-202ENST00000404006 KANK4Q5T7N3 995 aaPredicted RBP20.96■□□□□ 0.95
RNF216P1-202ENST00000404006 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms