RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
CLIP4-203ENST00000401617 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
CLIP4-203ENST00000401617 ZCCHC6Q5VYS8 1495 aaKnown RBP23■■□□□ 1.27
CLIP4-203ENST00000401617 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
CLIP4-203ENST00000401617 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
CLIP4-203ENST00000401617 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
CLIP4-203ENST00000401617 MYO15BQ96JP2 1530 aa22.25■■□□□ 1.15
CLIP4-203ENST00000401617 ABCC9O60706 1549 aa22.09■■□□□ 1.13
CLIP4-203ENST00000401617 NACADO15069 1562 aa21.99■■□□□ 1.11
CLIP4-203ENST00000401617 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
CLIP4-203ENST00000401617 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
CLIP4-203ENST00000401617 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
CLIP4-203ENST00000401617 UNC13AQ9UPW8 1703 aa21.36■■□□□ 1.01
CLIP4-203ENST00000401617 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
CLIP4-203ENST00000401617 CECR2Q9BXF3 1484 aa21.19■□□□□ 0.98
CLIP4-203ENST00000401617 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
CLIP4-203ENST00000401617 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
CLIP4-203ENST00000401617 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
CLIP4-203ENST00000401617 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
CLIP4-203ENST00000401617 WIZO95785 1651 aa20.95■□□□□ 0.94
CLIP4-203ENST00000401617 SMARCA4P51532 1647 aa20.93■□□□□ 0.94
CLIP4-203ENST00000401617 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLIP4-203ENST00000401617 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
CLIP4-203ENST00000401617 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
CLIP4-203ENST00000401617 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
CLIP4-203ENST00000401617 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
CLIP4-203ENST00000401617 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
CLIP4-203ENST00000401617 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
CLIP4-203ENST00000401617 BAZ1BQ9UIG0 1483 aaKnown RBP20.38■□□□□ 0.85
CLIP4-203ENST00000401617 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
CLIP4-203ENST00000401617 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
CLIP4-203ENST00000401617 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
CLIP4-203ENST00000401617 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
CLIP4-203ENST00000401617 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
CLIP4-203ENST00000401617 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
CLIP4-203ENST00000401617 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
CLIP4-203ENST00000401617 FAM9AQ8IZU1 332 aaPredicted RBP19.97■□□□□ 0.79
CLIP4-203ENST00000401617 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
CLIP4-203ENST00000401617 CFTRP13569 1480 aa19.92■□□□□ 0.78
CLIP4-203ENST00000401617 PRDM2Q13029 1718 aa19.87■□□□□ 0.77
CLIP4-203ENST00000401617 EEA1Q15075 1411 aa19.87■□□□□ 0.77
CLIP4-203ENST00000401617 SOGA1O94964 1423 aa19.84■□□□□ 0.77
CLIP4-203ENST00000401617 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
CLIP4-203ENST00000401617 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
CLIP4-203ENST00000401617 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
CLIP4-203ENST00000401617 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
CLIP4-203ENST00000401617 CSRNP3Q8WYN3 585 aa19.72■□□□□ 0.75
CLIP4-203ENST00000401617 CUX1P39880 1505 aa19.72■□□□□ 0.75
CLIP4-203ENST00000401617 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
CLIP4-203ENST00000401617 KIF21BO75037 1637 aa19.61■□□□□ 0.73
CLIP4-203ENST00000401617 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
CLIP4-203ENST00000401617 GOLGA3Q08378 1498 aa19.59■□□□□ 0.73
CLIP4-203ENST00000401617 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
CLIP4-203ENST00000401617 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
CLIP4-203ENST00000401617 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
CLIP4-203ENST00000401617 NESP48681 1621 aa19.52■□□□□ 0.71
CLIP4-203ENST00000401617 CEP162Q5TB80 1403 aa19.5■□□□□ 0.71
CLIP4-203ENST00000401617 PCGF6Q9BYE7 350 aa19.46■□□□□ 0.71
CLIP4-203ENST00000401617 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
CLIP4-203ENST00000401617 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
CLIP4-203ENST00000401617 PRXQ9BXM0 1461 aa19.44■□□□□ 0.7
CLIP4-203ENST00000401617 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
CLIP4-203ENST00000401617 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
CLIP4-203ENST00000401617 TRIM26Q12899 539 aaPredicted RBP19.43■□□□□ 0.7
CLIP4-203ENST00000401617 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
CLIP4-203ENST00000401617 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
CLIP4-203ENST00000401617 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
CLIP4-203ENST00000401617 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
CLIP4-203ENST00000401617 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
CLIP4-203ENST00000401617 CUX2O14529 1486 aa19.35■□□□□ 0.69
CLIP4-203ENST00000401617 URB2Q14146 1524 aaKnown RBP19.32■□□□□ 0.68
CLIP4-203ENST00000401617 POLA1P09884 1462 aaPredicted RBP19.31■□□□□ 0.68
CLIP4-203ENST00000401617 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
CLIP4-203ENST00000401617 IGF1RP08069 1367 aa19.3■□□□□ 0.68
CLIP4-203ENST00000401617 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
CLIP4-203ENST00000401617 CLIP1P30622 1438 aa19.28■□□□□ 0.68
CLIP4-203ENST00000401617 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
CLIP4-203ENST00000401617 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
CLIP4-203ENST00000401617 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
CLIP4-203ENST00000401617 HRCP23327 699 aa19.17■□□□□ 0.66
CLIP4-203ENST00000401617 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
CLIP4-203ENST00000401617 ABCA5Q8WWZ7 1642 aa19.12■□□□□ 0.65
CLIP4-203ENST00000401617 PPARGC1BQ86YN6 1023 aaKnown RBP19.12■□□□□ 0.65
CLIP4-203ENST00000401617 CUL7Q14999 1698 aa19.11■□□□□ 0.65
CLIP4-203ENST00000401617 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
CLIP4-203ENST00000401617 TARBP1Q13395 1621 aaKnown RBP19.1■□□□□ 0.65
CLIP4-203ENST00000401617 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
CLIP4-203ENST00000401617 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
CLIP4-203ENST00000401617 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
CLIP4-203ENST00000401617 WDR62O43379 1518 aa19.02■□□□□ 0.64
CLIP4-203ENST00000401617 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
CLIP4-203ENST00000401617 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
CLIP4-203ENST00000401617 CTTNBP2Q8WZ74 1663 aa18.95■□□□□ 0.62
CLIP4-203ENST00000401617 PBRM1Q86U86 1689 aa18.93■□□□□ 0.62
CLIP4-203ENST00000401617 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
CLIP4-203ENST00000401617 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
CLIP4-203ENST00000401617 APLP2Q06481 763 aa18.89■□□□□ 0.62
CLIP4-203ENST00000401617 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
CLIP4-203ENST00000401617 EFCAB5A4FU69 1503 aa18.87■□□□□ 0.61
CLIP4-203ENST00000401617 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms