RNA–Protein interactions for RNA: ENST00000400470.3

RAB6A-203, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-203ENST00000400470 AEBP2Q6ZN18 517 aaPredicted RBP22.22■■□□□ 1.15
RAB6A-203ENST00000400470 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
RAB6A-203ENST00000400470 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
RAB6A-203ENST00000400470 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
RAB6A-203ENST00000400470 FOXD1Q16676 465 aa17.59■□□□□ 0.41
RAB6A-203ENST00000400470 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
RAB6A-203ENST00000400470 PPP6R1Q9UPN7 881 aa16.64■□□□□ 0.25
RAB6A-203ENST00000400470 ADRA2BP18089 450 aa16.58■□□□□ 0.24
RAB6A-203ENST00000400470 PIAS4Q8N2W9 510 aaPredicted RBP16.44■□□□□ 0.22
RAB6A-203ENST00000400470 MSH5O43196 834 aa16.3■□□□□ 0.2
RAB6A-203ENST00000400470 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
RAB6A-203ENST00000400470 MAPK8IP2Q13387 824 aaPredicted RBP15.18■□□□□ 0.02
RAB6A-203ENST00000400470 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
RAB6A-203ENST00000400470 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
RAB6A-203ENST00000400470 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
RAB6A-203ENST00000400470 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
RAB6A-203ENST00000400470 HOXD11P31277 338 aaPredicted RBP14.54□□□□□ -0.08
RAB6A-203ENST00000400470 RNF216Q9NWF9 866 aaPredicted RBP14.47□□□□□ -0.09
RAB6A-203ENST00000400470 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
RAB6A-203ENST00000400470 DCAF8L1A6NGE4 600 aa14.32□□□□□ -0.12
RAB6A-203ENST00000400470 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
RAB6A-203ENST00000400470 KCNA4P22459 653 aa14.24□□□□□ -0.13
RAB6A-203ENST00000400470 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
RAB6A-203ENST00000400470 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
RAB6A-203ENST00000400470 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
RAB6A-203ENST00000400470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAB6A-203ENST00000400470 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
RAB6A-203ENST00000400470 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
RAB6A-203ENST00000400470 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
RAB6A-203ENST00000400470 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
RAB6A-203ENST00000400470 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
RAB6A-203ENST00000400470 CAPN15O75808 1086 aa13.25□□□□□ -0.29
RAB6A-203ENST00000400470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
RAB6A-203ENST00000400470 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
RAB6A-203ENST00000400470 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
RAB6A-203ENST00000400470 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
RAB6A-203ENST00000400470 DSG3P32926 999 aa13.17□□□□□ -0.3
RAB6A-203ENST00000400470 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
RAB6A-203ENST00000400470 ZBTB22O15209 634 aa13.13□□□□□ -0.31
RAB6A-203ENST00000400470 APLP2Q06481 763 aa13.13□□□□□ -0.31
RAB6A-203ENST00000400470 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
RAB6A-203ENST00000400470 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
RAB6A-203ENST00000400470 ABCB7O75027 752 aa13□□□□□ -0.33
RAB6A-203ENST00000400470 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
RAB6A-203ENST00000400470 POLA2Q14181 598 aa12.81□□□□□ -0.36
RAB6A-203ENST00000400470 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
RAB6A-203ENST00000400470 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
RAB6A-203ENST00000400470 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
RAB6A-203ENST00000400470 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
RAB6A-203ENST00000400470 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
RAB6A-203ENST00000400470 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
RAB6A-203ENST00000400470 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
RAB6A-203ENST00000400470 FBLN2P98095 1184 aa12.32□□□□□ -0.44
RAB6A-203ENST00000400470 AKT1S1Q96B36 256 aa12.28□□□□□ -0.44
RAB6A-203ENST00000400470 POTEHQ6S545 545 aa12.24□□□□□ -0.45
RAB6A-203ENST00000400470 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
RAB6A-203ENST00000400470 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
RAB6A-203ENST00000400470 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
RAB6A-203ENST00000400470 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
RAB6A-203ENST00000400470 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
RAB6A-203ENST00000400470 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
RAB6A-203ENST00000400470 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
RAB6A-203ENST00000400470 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
RAB6A-203ENST00000400470 PIP4P2Q8N4L2 257 aa11.95□□□□□ -0.5
RAB6A-203ENST00000400470 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.5
RAB6A-203ENST00000400470 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
RAB6A-203ENST00000400470 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
RAB6A-203ENST00000400470 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
RAB6A-203ENST00000400470 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
RAB6A-203ENST00000400470 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
RAB6A-203ENST00000400470 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
RAB6A-203ENST00000400470 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
RAB6A-203ENST00000400470 HAX1O00165 279 aa11.63□□□□□ -0.55
RAB6A-203ENST00000400470 PROM2Q8N271 834 aa11.63□□□□□ -0.55
RAB6A-203ENST00000400470 STAG3Q9UJ98 1225 aa11.6□□□□□ -0.55
RAB6A-203ENST00000400470 EVX2Q03828 476 aa11.59□□□□□ -0.55
RAB6A-203ENST00000400470 SP7Q8TDD2 431 aaPredicted RBP11.57□□□□□ -0.56
RAB6A-203ENST00000400470 C19orf67A6NJJ6 358 aa11.53□□□□□ -0.56
RAB6A-203ENST00000400470 CREBZFQ9NS37 354 aa11.53□□□□□ -0.56
RAB6A-203ENST00000400470 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
RAB6A-203ENST00000400470 FKBP8Q14318 412 aa11.47□□□□□ -0.57
RAB6A-203ENST00000400470 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
RAB6A-203ENST00000400470 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
RAB6A-203ENST00000400470 GABBR2O75899 941 aa11.29□□□□□ -0.6
RAB6A-203ENST00000400470 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
RAB6A-203ENST00000400470 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
RAB6A-203ENST00000400470 MIER1Q8N108 512 aa11.23□□□□□ -0.61
RAB6A-203ENST00000400470 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
RAB6A-203ENST00000400470 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
RAB6A-203ENST00000400470 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
RAB6A-203ENST00000400470 PLEKHG5O94827 1062 aa11.14□□□□□ -0.63
RAB6A-203ENST00000400470 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
RAB6A-203ENST00000400470 CLCN6P51797 869 aa11.12□□□□□ -0.63
RAB6A-203ENST00000400470 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
RAB6A-203ENST00000400470 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
RAB6A-203ENST00000400470 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
RAB6A-203ENST00000400470 TSPYL2Q9H2G4 693 aaPredicted RBP11.09□□□□□ -0.63
RAB6A-203ENST00000400470 GALR2O43603 387 aaPredicted RBP11.08□□□□□ -0.64
RAB6A-203ENST00000400470 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
RAB6A-203ENST00000400470 NUBP1P53384 320 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms