RNA–Protein interactions for RNA: ENST00000399247.6

HLA-F-AS1-207, HLA-F antisense RNA 1, humanhuman

Gene HLA-F-AS1, Length 1,905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-AS1-207ENST00000399247 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
HLA-F-AS1-207ENST00000399247 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
HLA-F-AS1-207ENST00000399247 ZCCHC6Q5VYS8 1495 aaKnown RBP20.16■□□□□ 0.82
HLA-F-AS1-207ENST00000399247 SHROOM4Q9ULL8 1493 aa19.89■□□□□ 0.77
HLA-F-AS1-207ENST00000399247 DCAF1Q9Y4B6 1507 aa19.75■□□□□ 0.75
HLA-F-AS1-207ENST00000399247 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
HLA-F-AS1-207ENST00000399247 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
HLA-F-AS1-207ENST00000399247 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
HLA-F-AS1-207ENST00000399247 HRCP23327 699 aa19.26■□□□□ 0.67
HLA-F-AS1-207ENST00000399247 NACADO15069 1562 aa19.03■□□□□ 0.64
HLA-F-AS1-207ENST00000399247 ABCC9O60706 1549 aa18.99■□□□□ 0.63
HLA-F-AS1-207ENST00000399247 SCRIBQ14160 1630 aa18.98■□□□□ 0.63
HLA-F-AS1-207ENST00000399247 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
HLA-F-AS1-207ENST00000399247 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
HLA-F-AS1-207ENST00000399247 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
HLA-F-AS1-207ENST00000399247 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.6
HLA-F-AS1-207ENST00000399247 RB1CC1Q8TDY2 1594 aa18.73■□□□□ 0.59
HLA-F-AS1-207ENST00000399247 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
HLA-F-AS1-207ENST00000399247 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
HLA-F-AS1-207ENST00000399247 TRIM26Q12899 539 aaPredicted RBP18.51■□□□□ 0.55
HLA-F-AS1-207ENST00000399247 PELP1Q8IZL8 1130 aaKnown RBP18.51■□□□□ 0.55
HLA-F-AS1-207ENST00000399247 MROH2BQ7Z745 1585 aa18.49■□□□□ 0.55
HLA-F-AS1-207ENST00000399247 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
HLA-F-AS1-207ENST00000399247 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
HLA-F-AS1-207ENST00000399247 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
HLA-F-AS1-207ENST00000399247 WIZO95785 1651 aa18.35■□□□□ 0.53
HLA-F-AS1-207ENST00000399247 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
HLA-F-AS1-207ENST00000399247 SMARCA4P51532 1647 aa18.24■□□□□ 0.51
HLA-F-AS1-207ENST00000399247 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
HLA-F-AS1-207ENST00000399247 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
HLA-F-AS1-207ENST00000399247 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
HLA-F-AS1-207ENST00000399247 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
HLA-F-AS1-207ENST00000399247 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
HLA-F-AS1-207ENST00000399247 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.48
HLA-F-AS1-207ENST00000399247 SMARCA2P51531 1590 aa18.02■□□□□ 0.47
HLA-F-AS1-207ENST00000399247 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
HLA-F-AS1-207ENST00000399247 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
HLA-F-AS1-207ENST00000399247 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
HLA-F-AS1-207ENST00000399247 MYT1Q01538 1121 aa17.85■□□□□ 0.45
HLA-F-AS1-207ENST00000399247 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.44
HLA-F-AS1-207ENST00000399247 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
HLA-F-AS1-207ENST00000399247 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
HLA-F-AS1-207ENST00000399247 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
HLA-F-AS1-207ENST00000399247 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
HLA-F-AS1-207ENST00000399247 EEA1Q15075 1411 aa17.67■□□□□ 0.42
HLA-F-AS1-207ENST00000399247 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
HLA-F-AS1-207ENST00000399247 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
HLA-F-AS1-207ENST00000399247 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
HLA-F-AS1-207ENST00000399247 SOGA1O94964 1423 aa17.6■□□□□ 0.41
HLA-F-AS1-207ENST00000399247 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
HLA-F-AS1-207ENST00000399247 HMGXB3Q12766 1538 aa17.58■□□□□ 0.41
HLA-F-AS1-207ENST00000399247 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
HLA-F-AS1-207ENST00000399247 NEUROD1Q13562 356 aa17.55■□□□□ 0.4
HLA-F-AS1-207ENST00000399247 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
HLA-F-AS1-207ENST00000399247 SYNJ1O43426 1573 aa17.52■□□□□ 0.39
HLA-F-AS1-207ENST00000399247 TNIKQ9UKE5 1360 aa17.51■□□□□ 0.39
HLA-F-AS1-207ENST00000399247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
HLA-F-AS1-207ENST00000399247 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
HLA-F-AS1-207ENST00000399247 GTF3C3Q9Y5Q9 886 aa17.47■□□□□ 0.39
HLA-F-AS1-207ENST00000399247 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
HLA-F-AS1-207ENST00000399247 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
HLA-F-AS1-207ENST00000399247 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
HLA-F-AS1-207ENST00000399247 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
HLA-F-AS1-207ENST00000399247 KIF21BO75037 1637 aa17.38■□□□□ 0.37
HLA-F-AS1-207ENST00000399247 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
HLA-F-AS1-207ENST00000399247 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
HLA-F-AS1-207ENST00000399247 CFTRP13569 1480 aa17.35■□□□□ 0.37
HLA-F-AS1-207ENST00000399247 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.36
HLA-F-AS1-207ENST00000399247 CUX1P39880 1505 aa17.24■□□□□ 0.35
HLA-F-AS1-207ENST00000399247 PRDM2Q13029 1718 aa17.22■□□□□ 0.35
HLA-F-AS1-207ENST00000399247 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
HLA-F-AS1-207ENST00000399247 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
HLA-F-AS1-207ENST00000399247 CLIP1P30622 1438 aa17.19■□□□□ 0.34
HLA-F-AS1-207ENST00000399247 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
HLA-F-AS1-207ENST00000399247 ERICH3Q5RHP9 1530 aa17.18■□□□□ 0.34
HLA-F-AS1-207ENST00000399247 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
HLA-F-AS1-207ENST00000399247 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
HLA-F-AS1-207ENST00000399247 VPS8Q8N3P4 1428 aa17.11■□□□□ 0.33
HLA-F-AS1-207ENST00000399247 CLSPNQ9HAW4 1339 aa17.1■□□□□ 0.33
HLA-F-AS1-207ENST00000399247 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.31
HLA-F-AS1-207ENST00000399247 MIER1Q8N108 512 aa17.02■□□□□ 0.31
HLA-F-AS1-207ENST00000399247 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.31
HLA-F-AS1-207ENST00000399247 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
HLA-F-AS1-207ENST00000399247 APLP2Q06481 763 aa16.98■□□□□ 0.31
HLA-F-AS1-207ENST00000399247 CUX2O14529 1486 aa16.97■□□□□ 0.31
HLA-F-AS1-207ENST00000399247 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
HLA-F-AS1-207ENST00000399247 IGF1RP08069 1367 aa16.96■□□□□ 0.31
HLA-F-AS1-207ENST00000399247 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
HLA-F-AS1-207ENST00000399247 RANGAP1P46060 587 aaPredicted RBP16.92■□□□□ 0.3
HLA-F-AS1-207ENST00000399247 DNMBPQ6XZF7 1577 aa16.91■□□□□ 0.3
HLA-F-AS1-207ENST00000399247 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
HLA-F-AS1-207ENST00000399247 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
HLA-F-AS1-207ENST00000399247 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
HLA-F-AS1-207ENST00000399247 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
HLA-F-AS1-207ENST00000399247 NESP48681 1621 aa16.85■□□□□ 0.29
HLA-F-AS1-207ENST00000399247 ARHGAP35Q9NRY4 1499 aa16.84■□□□□ 0.29
HLA-F-AS1-207ENST00000399247 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
HLA-F-AS1-207ENST00000399247 POLA1P09884 1462 aaPredicted RBP16.82■□□□□ 0.28
HLA-F-AS1-207ENST00000399247 RAD54L2Q9Y4B4 1467 aa16.78■□□□□ 0.28
HLA-F-AS1-207ENST00000399247 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms