RNA–Protein interactions for RNA: ENST00000398892.7

USP19-203, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP19, Length 4,622 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-203ENST00000398892 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
USP19-203ENST00000398892 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
USP19-203ENST00000398892 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
USP19-203ENST00000398892 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
USP19-203ENST00000398892 PCGF6Q9BYE7 350 aa23.99■■□□□ 1.43
USP19-203ENST00000398892 EHMT2Q96KQ7 1210 aa23.93■■□□□ 1.42
USP19-203ENST00000398892 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
USP19-203ENST00000398892 FAM9AQ8IZU1 332 aaPredicted RBP23.4■■□□□ 1.34
USP19-203ENST00000398892 CENPBP07199 599 aaPredicted RBP23.23■■□□□ 1.31
USP19-203ENST00000398892 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
USP19-203ENST00000398892 TTBK1Q5TCY1 1321 aaPredicted RBP23.22■■□□□ 1.31
USP19-203ENST00000398892 HRCP23327 699 aa23.18■■□□□ 1.3
USP19-203ENST00000398892 CCER1Q8TC90 406 aaPredicted RBP23.05■■□□□ 1.28
USP19-203ENST00000398892 APLP2Q06481 763 aa22.99■■□□□ 1.27
USP19-203ENST00000398892 MYT1Q01538 1121 aa22.91■■□□□ 1.26
USP19-203ENST00000398892 PPARGC1BQ86YN6 1023 aaKnown RBP22.88■■□□□ 1.25
USP19-203ENST00000398892 TRIM41Q8WV44 630 aa22.87■■□□□ 1.25
USP19-203ENST00000398892 YTHDC1Q96MU7 727 aaKnown RBP22.84■■□□□ 1.25
USP19-203ENST00000398892 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
USP19-203ENST00000398892 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
USP19-203ENST00000398892 ERICH6Q7L0X2 663 aa22.63■■□□□ 1.21
USP19-203ENST00000398892 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
USP19-203ENST00000398892 RANGAP1P46060 587 aaPredicted RBP22.57■■□□□ 1.2
USP19-203ENST00000398892 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
USP19-203ENST00000398892 NEFLP07196 543 aa22.34■■□□□ 1.17
USP19-203ENST00000398892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
USP19-203ENST00000398892 DIEXFQ68CQ4 756 aaKnown RBP22.15■■□□□ 1.14
USP19-203ENST00000398892 ATP1B4Q9UN42 357 aaPredicted RBP22.07■■□□□ 1.12
USP19-203ENST00000398892 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
USP19-203ENST00000398892 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
USP19-203ENST00000398892 ITGAEP38570 1179 aa21.84■■□□□ 1.09
USP19-203ENST00000398892 ABCC9O60706 1549 aa21.82■■□□□ 1.08
USP19-203ENST00000398892 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
USP19-203ENST00000398892 BCANQ96GW7 911 aa21.62■■□□□ 1.05
USP19-203ENST00000398892 ZNF316A6NFI3 1004 aaPredicted RBP21.53■■□□□ 1.04
USP19-203ENST00000398892 CNGB1Q14028 1251 aaPredicted RBP21.52■■□□□ 1.03
USP19-203ENST00000398892 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
USP19-203ENST00000398892 POLR3GLQ9BT43 218 aa21.48■■□□□ 1.03
USP19-203ENST00000398892 DAXXQ9UER7 740 aaPredicted RBP21.45■■□□□ 1.02
USP19-203ENST00000398892 NEUROD1Q13562 356 aa21.44■■□□□ 1.02
USP19-203ENST00000398892 RTL5Q5HYW3 569 aaPredicted RBP21.39■■□□□ 1.01
USP19-203ENST00000398892 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
USP19-203ENST00000398892 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
USP19-203ENST00000398892 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
USP19-203ENST00000398892 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
USP19-203ENST00000398892 CDK11AQ9UQ88 783 aaPredicted RBP21.2■□□□□ 0.98
USP19-203ENST00000398892 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
USP19-203ENST00000398892 ANP32CO43423 234 aa21.14■□□□□ 0.97
USP19-203ENST00000398892 FKBP8Q14318 412 aa21.04■□□□□ 0.96
USP19-203ENST00000398892 MYO15BQ96JP2 1530 aa21.02■□□□□ 0.96
USP19-203ENST00000398892 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
USP19-203ENST00000398892 CLSPNQ9HAW4 1339 aa20.99■□□□□ 0.95
USP19-203ENST00000398892 MIER1Q8N108 512 aa20.97■□□□□ 0.95
USP19-203ENST00000398892 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
USP19-203ENST00000398892 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
USP19-203ENST00000398892 DDX10Q13206 875 aaKnown RBP20.81■□□□□ 0.92
USP19-203ENST00000398892 ANP32AP39687 249 aaKnown RBP20.79■□□□□ 0.92
USP19-203ENST00000398892 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
USP19-203ENST00000398892 NPM2Q86SE8 214 aaKnown RBP20.73■□□□□ 0.91
USP19-203ENST00000398892 HNRNPUQ00839 825 aaKnown RBP eCLIP20.73■□□□□ 0.91
USP19-203ENST00000398892 EIF5BO60841 1220 aaKnown RBP20.69■□□□□ 0.9
USP19-203ENST00000398892 MYT1LQ9UL68 1186 aa20.67■□□□□ 0.9
USP19-203ENST00000398892 SLC4A1APQ9BWU0 796 aaKnown RBP20.66■□□□□ 0.9
USP19-203ENST00000398892 NBR1Q14596 966 aa20.65■□□□□ 0.9
USP19-203ENST00000398892 ANP32EQ9BTT0 268 aa20.63■□□□□ 0.89
USP19-203ENST00000398892 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
USP19-203ENST00000398892 IRX6P78412 446 aaPredicted RBP20.58■□□□□ 0.89
USP19-203ENST00000398892 FAM9BQ8IZU0 186 aa20.57■□□□□ 0.88
USP19-203ENST00000398892 HIRIP3Q9BW71 556 aaPredicted RBP20.52■□□□□ 0.88
USP19-203ENST00000398892 TONSLQ96HA7 1378 aa20.48■□□□□ 0.87
USP19-203ENST00000398892 ZBTB47Q9UFB7 747 aaPredicted RBP20.47■□□□□ 0.87
USP19-203ENST00000398892 CCDC136Q96JN2 1154 aa20.45■□□□□ 0.86
USP19-203ENST00000398892 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
USP19-203ENST00000398892 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
USP19-203ENST00000398892 SALL2Q9Y467 1007 aaPredicted RBP20.39■□□□□ 0.85
USP19-203ENST00000398892 CANXP27824 592 aaKnown RBP20.38■□□□□ 0.85
USP19-203ENST00000398892 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
USP19-203ENST00000398892 RB1CC1Q8TDY2 1594 aa20.37■□□□□ 0.85
USP19-203ENST00000398892 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
USP19-203ENST00000398892 NACADO15069 1562 aa20.35■□□□□ 0.85
USP19-203ENST00000398892 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
USP19-203ENST00000398892 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
USP19-203ENST00000398892 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
USP19-203ENST00000398892 TMC1Q8TDI8 760 aa20.24■□□□□ 0.83
USP19-203ENST00000398892 CLIP1P30622 1438 aa20.23■□□□□ 0.83
USP19-203ENST00000398892 ARXQ96QS3 562 aa20.2■□□□□ 0.82
USP19-203ENST00000398892 CHIC2Q9UKJ5 165 aa20.19■□□□□ 0.82
USP19-203ENST00000398892 ZNF777Q9ULD5 760 aaPredicted RBP20.16■□□□□ 0.82
USP19-203ENST00000398892 SENP3-EIF4A1A0A087X0R7 540 aa20.15■□□□□ 0.82
USP19-203ENST00000398892 GLIPR1L2Q4G1C9 344 aa20.13■□□□□ 0.81
USP19-203ENST00000398892 RBM19Q9Y4C8 960 aaKnown RBP20.12■□□□□ 0.81
USP19-203ENST00000398892 RTN4Q9NQC3 1192 aaKnown RBP20.1■□□□□ 0.81
USP19-203ENST00000398892 UPF2Q9HAU5 1272 aaKnown RBP20.09■□□□□ 0.81
USP19-203ENST00000398892 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.81
USP19-203ENST00000398892 EIF4G2P78344 907 aaKnown RBP eCLIP20.08■□□□□ 0.81
USP19-203ENST00000398892 HSP90AA1P07900 732 aaKnown RBP20.07■□□□□ 0.8
USP19-203ENST00000398892 TSHZ2Q9NRE2 1034 aa20.06■□□□□ 0.8
USP19-203ENST00000398892 ANP32BQ92688 251 aaKnown RBP20.06■□□□□ 0.8
USP19-203ENST00000398892 SIN3AQ96ST3 1273 aa20.04■□□□□ 0.8
USP19-203ENST00000398892 PPP4R2Q9NY27 417 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms