RNA–Protein interactions for RNA: ENST00000398437.1

ABCG1-204, Transcript of ATP binding cassette subfamily G member 1, humanhuman

TSL 1 (best) BASIC

Gene ABCG1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCG1-204ENST00000398437 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
ABCG1-204ENST00000398437 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.29
ABCG1-204ENST00000398437 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.27
ABCG1-204ENST00000398437 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
ABCG1-204ENST00000398437 HRCP23327 699 aa16.1■□□□□ 0.17
ABCG1-204ENST00000398437 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
ABCG1-204ENST00000398437 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
ABCG1-204ENST00000398437 ZCCHC6Q5VYS8 1495 aaKnown RBP15.87■□□□□ 0.13
ABCG1-204ENST00000398437 PCGF6Q9BYE7 350 aa15.83■□□□□ 0.12
ABCG1-204ENST00000398437 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
ABCG1-204ENST00000398437 ABCC9O60706 1549 aa15.56■□□□□ 0.08
ABCG1-204ENST00000398437 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
ABCG1-204ENST00000398437 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
ABCG1-204ENST00000398437 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
ABCG1-204ENST00000398437 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
ABCG1-204ENST00000398437 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
ABCG1-204ENST00000398437 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
ABCG1-204ENST00000398437 LOC105371045A0A1W2PR82 267 aa15.32■□□□□ 0.04
ABCG1-204ENST00000398437 SCRIBQ14160 1630 aa15.32■□□□□ 0.04
ABCG1-204ENST00000398437 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
ABCG1-204ENST00000398437 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
ABCG1-204ENST00000398437 PABPN1Q86U42 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
ABCG1-204ENST00000398437 MYT1Q01538 1121 aa15.07■□□□□ 0
ABCG1-204ENST00000398437 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
ABCG1-204ENST00000398437 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
ABCG1-204ENST00000398437 CECR2Q9BXF3 1484 aa14.97□□□□□ -0.01
ABCG1-204ENST00000398437 ACIN1Q9UKV3 1341 aaKnown RBP14.91□□□□□ -0.02
ABCG1-204ENST00000398437 NACADO15069 1562 aa14.91□□□□□ -0.02
ABCG1-204ENST00000398437 NEUROD1Q13562 356 aa14.9□□□□□ -0.02
ABCG1-204ENST00000398437 TTBK1Q5TCY1 1321 aaPredicted RBP14.86□□□□□ -0.03
ABCG1-204ENST00000398437 GTF3C3Q9Y5Q9 886 aa14.86□□□□□ -0.03
ABCG1-204ENST00000398437 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
ABCG1-204ENST00000398437 RB1CC1Q8TDY2 1594 aa14.8□□□□□ -0.04
ABCG1-204ENST00000398437 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
ABCG1-204ENST00000398437 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
ABCG1-204ENST00000398437 UNC13AQ9UPW8 1703 aa14.68□□□□□ -0.06
ABCG1-204ENST00000398437 WIZO95785 1651 aa14.67□□□□□ -0.06
ABCG1-204ENST00000398437 UBTFP17480 764 aaKnown RBP14.66□□□□□ -0.06
ABCG1-204ENST00000398437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
ABCG1-204ENST00000398437 DIEXFQ68CQ4 756 aaKnown RBP14.64□□□□□ -0.07
ABCG1-204ENST00000398437 CCER1Q8TC90 406 aaPredicted RBP14.61□□□□□ -0.07
ABCG1-204ENST00000398437 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
ABCG1-204ENST00000398437 YTHDC1Q96MU7 727 aaKnown RBP14.54□□□□□ -0.08
ABCG1-204ENST00000398437 CCDC88BA6NC98 1476 aa14.47□□□□□ -0.09
ABCG1-204ENST00000398437 ABCC8Q09428 1581 aa14.44□□□□□ -0.1
ABCG1-204ENST00000398437 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
ABCG1-204ENST00000398437 BICRAQ9NZM4 1560 aa14.42□□□□□ -0.1
ABCG1-204ENST00000398437 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
ABCG1-204ENST00000398437 SOGA1O94964 1423 aa14.36□□□□□ -0.11
ABCG1-204ENST00000398437 APLP2Q06481 763 aa14.35□□□□□ -0.11
ABCG1-204ENST00000398437 EIF4G1Q04637 1599 aaKnown RBP14.35□□□□□ -0.11
ABCG1-204ENST00000398437 TOP2AP11388 1531 aaKnown RBP14.34□□□□□ -0.11
ABCG1-204ENST00000398437 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
ABCG1-204ENST00000398437 BAZ1BQ9UIG0 1483 aaKnown RBP14.28□□□□□ -0.12
ABCG1-204ENST00000398437 SMARCA2P51531 1590 aa14.27□□□□□ -0.13
ABCG1-204ENST00000398437 RUSC2Q8N2Y8 1516 aa14.26□□□□□ -0.13
ABCG1-204ENST00000398437 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
ABCG1-204ENST00000398437 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
ABCG1-204ENST00000398437 MIER1Q8N108 512 aa14.24□□□□□ -0.13
ABCG1-204ENST00000398437 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.13
ABCG1-204ENST00000398437 BCL11AQ9H165 835 aa14.21□□□□□ -0.14
ABCG1-204ENST00000398437 CEP162Q5TB80 1403 aa14.19□□□□□ -0.14
ABCG1-204ENST00000398437 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
ABCG1-204ENST00000398437 ANP32EQ9BTT0 268 aa14.12□□□□□ -0.15
ABCG1-204ENST00000398437 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
ABCG1-204ENST00000398437 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
ABCG1-204ENST00000398437 ITGAEP38570 1179 aa14.09□□□□□ -0.15
ABCG1-204ENST00000398437 SUPT16HQ9Y5B9 1047 aaKnown RBP14.06□□□□□ -0.16
ABCG1-204ENST00000398437 GOLGA3Q08378 1498 aa14.06□□□□□ -0.16
ABCG1-204ENST00000398437 EEA1Q15075 1411 aa14.05□□□□□ -0.16
ABCG1-204ENST00000398437 CLIP1P30622 1438 aa14.03□□□□□ -0.16
ABCG1-204ENST00000398437 TSHZ2Q9NRE2 1034 aa14.03□□□□□ -0.16
ABCG1-204ENST00000398437 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.16
ABCG1-204ENST00000398437 P3H3Q8IVL6 736 aa14.02□□□□□ -0.17
ABCG1-204ENST00000398437 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
ABCG1-204ENST00000398437 CEP164Q9UPV0 1460 aa13.97□□□□□ -0.17
ABCG1-204ENST00000398437 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
ABCG1-204ENST00000398437 CLSPNQ9HAW4 1339 aa13.91□□□□□ -0.18
ABCG1-204ENST00000398437 BCANQ96GW7 911 aa13.9□□□□□ -0.18
ABCG1-204ENST00000398437 NCAPD3P42695 1498 aa13.88□□□□□ -0.19
ABCG1-204ENST00000398437 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
ABCG1-204ENST00000398437 KANK4Q5T7N3 995 aaPredicted RBP13.84□□□□□ -0.19
ABCG1-204ENST00000398437 CUX2O14529 1486 aa13.82□□□□□ -0.2
ABCG1-204ENST00000398437 FAM50AQ14320 339 aaKnown RBP13.82□□□□□ -0.2
ABCG1-204ENST00000398437 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
ABCG1-204ENST00000398437 VPS8Q8N3P4 1428 aa13.8□□□□□ -0.2
ABCG1-204ENST00000398437 CC2D2AQ9P2K1 1620 aa13.8□□□□□ -0.2
ABCG1-204ENST00000398437 ARID3CA6NKF2 412 aa13.76□□□□□ -0.21
ABCG1-204ENST00000398437 CUX1P39880 1505 aa13.75□□□□□ -0.21
ABCG1-204ENST00000398437 CFTRP13569 1480 aa13.74□□□□□ -0.21
ABCG1-204ENST00000398437 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
ABCG1-204ENST00000398437 FKBP8Q14318 412 aa13.73□□□□□ -0.21
ABCG1-204ENST00000398437 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
ABCG1-204ENST00000398437 HMGXB3Q12766 1538 aa13.71□□□□□ -0.21
ABCG1-204ENST00000398437 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.22
ABCG1-204ENST00000398437 KCNH8Q96L42 1107 aa13.69□□□□□ -0.22
ABCG1-204ENST00000398437 KIF21BO75037 1637 aa13.69□□□□□ -0.22
ABCG1-204ENST00000398437 NESP48681 1621 aa13.69□□□□□ -0.22
ABCG1-204ENST00000398437 IGF1RP08069 1367 aa13.68□□□□□ -0.22
ABCG1-204ENST00000398437 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms