RNA–Protein interactions for RNA: ENST00000397857.5

ITGB2-208, Transcript of integrin subunit beta 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ITGB2, Length 2,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-208ENST00000397857 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
ITGB2-208ENST00000397857 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
ITGB2-208ENST00000397857 DCAF8L2P0C7V8 631 aa25.55■■□□□ 1.68
ITGB2-208ENST00000397857 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
ITGB2-208ENST00000397857 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
ITGB2-208ENST00000397857 PELP1Q8IZL8 1130 aaKnown RBP24.88■■□□□ 1.57
ITGB2-208ENST00000397857 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
ITGB2-208ENST00000397857 MYT1Q01538 1121 aa24.48■■□□□ 1.51
ITGB2-208ENST00000397857 ABCC9O60706 1549 aa24.47■■□□□ 1.51
ITGB2-208ENST00000397857 DCAF1Q9Y4B6 1507 aa24.09■■□□□ 1.45
ITGB2-208ENST00000397857 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
ITGB2-208ENST00000397857 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
ITGB2-208ENST00000397857 NACADO15069 1562 aa23.56■■□□□ 1.36
ITGB2-208ENST00000397857 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
ITGB2-208ENST00000397857 CECR2Q9BXF3 1484 aa23.52■■□□□ 1.36
ITGB2-208ENST00000397857 MYO15BQ96JP2 1530 aa23.52■■□□□ 1.36
ITGB2-208ENST00000397857 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
ITGB2-208ENST00000397857 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
ITGB2-208ENST00000397857 RB1CC1Q8TDY2 1594 aa23.36■■□□□ 1.33
ITGB2-208ENST00000397857 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
ITGB2-208ENST00000397857 LOC105371045A0A1W2PR82 267 aa23.21■■□□□ 1.31
ITGB2-208ENST00000397857 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
ITGB2-208ENST00000397857 FAM9AQ8IZU1 332 aaPredicted RBP23.1■■□□□ 1.29
ITGB2-208ENST00000397857 WIZO95785 1651 aa23.1■■□□□ 1.29
ITGB2-208ENST00000397857 HRCP23327 699 aa23.05■■□□□ 1.28
ITGB2-208ENST00000397857 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
ITGB2-208ENST00000397857 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
ITGB2-208ENST00000397857 PRKCSHP14314 528 aaPredicted RBP22.91■■□□□ 1.26
ITGB2-208ENST00000397857 BICRAQ9NZM4 1560 aa22.86■■□□□ 1.25
ITGB2-208ENST00000397857 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
ITGB2-208ENST00000397857 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
ITGB2-208ENST00000397857 SCAF1Q9H7N4 1312 aaKnown RBP22.64■■□□□ 1.22
ITGB2-208ENST00000397857 CCDC88BA6NC98 1476 aa22.62■■□□□ 1.21
ITGB2-208ENST00000397857 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.2
ITGB2-208ENST00000397857 ABCC8Q09428 1581 aa22.52■■□□□ 1.2
ITGB2-208ENST00000397857 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
ITGB2-208ENST00000397857 ERICH6Q7L0X2 663 aa22.49■■□□□ 1.19
ITGB2-208ENST00000397857 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
ITGB2-208ENST00000397857 BCL11AQ9H165 835 aa22.44■■□□□ 1.18
ITGB2-208ENST00000397857 PPARGC1BQ86YN6 1023 aaKnown RBP22.42■■□□□ 1.18
ITGB2-208ENST00000397857 APLP2Q06481 763 aa22.38■■□□□ 1.17
ITGB2-208ENST00000397857 ATAD2BQ9ULI0 1458 aa22.38■■□□□ 1.17
ITGB2-208ENST00000397857 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
ITGB2-208ENST00000397857 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
ITGB2-208ENST00000397857 SOGA1O94964 1423 aa22.23■■□□□ 1.15
ITGB2-208ENST00000397857 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
ITGB2-208ENST00000397857 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
ITGB2-208ENST00000397857 RANGAP1P46060 587 aaPredicted RBP22.12■■□□□ 1.13
ITGB2-208ENST00000397857 SLC24A1O60721 1099 aa22.09■■□□□ 1.13
ITGB2-208ENST00000397857 WRNQ14191 1432 aaPredicted RBP eCLIP22.05■■□□□ 1.12
ITGB2-208ENST00000397857 UBTFP17480 764 aaKnown RBP22.04■■□□□ 1.12
ITGB2-208ENST00000397857 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
ITGB2-208ENST00000397857 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
ITGB2-208ENST00000397857 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
ITGB2-208ENST00000397857 TRIM26Q12899 539 aaPredicted RBP21.95■■□□□ 1.1
ITGB2-208ENST00000397857 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
ITGB2-208ENST00000397857 CENPBP07199 599 aaPredicted RBP21.86■■□□□ 1.09
ITGB2-208ENST00000397857 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
ITGB2-208ENST00000397857 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
ITGB2-208ENST00000397857 CEP162Q5TB80 1403 aa21.75■■□□□ 1.07
ITGB2-208ENST00000397857 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
ITGB2-208ENST00000397857 CFTRP13569 1480 aa21.64■■□□□ 1.06
ITGB2-208ENST00000397857 NESP48681 1621 aa21.64■■□□□ 1.06
ITGB2-208ENST00000397857 RAPGEF2Q9Y4G8 1499 aa21.64■■□□□ 1.05
ITGB2-208ENST00000397857 CUX1P39880 1505 aa21.64■■□□□ 1.05
ITGB2-208ENST00000397857 TNIKQ9UKE5 1360 aa21.62■■□□□ 1.05
ITGB2-208ENST00000397857 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
ITGB2-208ENST00000397857 GOLGA3Q08378 1498 aa21.59■■□□□ 1.05
ITGB2-208ENST00000397857 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
ITGB2-208ENST00000397857 EEA1Q15075 1411 aa21.56■■□□□ 1.04
ITGB2-208ENST00000397857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.53■■□□□ 1.04
ITGB2-208ENST00000397857 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
ITGB2-208ENST00000397857 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
ITGB2-208ENST00000397857 CLIP1P30622 1438 aa21.45■■□□□ 1.03
ITGB2-208ENST00000397857 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
ITGB2-208ENST00000397857 CUX2O14529 1486 aa21.41■■□□□ 1.02
ITGB2-208ENST00000397857 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
ITGB2-208ENST00000397857 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
ITGB2-208ENST00000397857 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
ITGB2-208ENST00000397857 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
ITGB2-208ENST00000397857 ANP32EQ9BTT0 268 aa21.37■■□□□ 1.01
ITGB2-208ENST00000397857 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
ITGB2-208ENST00000397857 P3H3Q8IVL6 736 aa21.36■■□□□ 1.01
ITGB2-208ENST00000397857 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
ITGB2-208ENST00000397857 KIF21BO75037 1637 aa21.33■■□□□ 1
ITGB2-208ENST00000397857 DAXXQ9UER7 740 aaPredicted RBP21.3■■□□□ 1
ITGB2-208ENST00000397857 IGF1RP08069 1367 aa21.29■■□□□ 1
ITGB2-208ENST00000397857 PRXQ9BXM0 1461 aa21.29■■□□□ 1
ITGB2-208ENST00000397857 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
ITGB2-208ENST00000397857 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
ITGB2-208ENST00000397857 KANK4Q5T7N3 995 aaPredicted RBP21.24■□□□□ 0.99
ITGB2-208ENST00000397857 ATP1B4Q9UN42 357 aaPredicted RBP21.23■□□□□ 0.99
ITGB2-208ENST00000397857 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
ITGB2-208ENST00000397857 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
ITGB2-208ENST00000397857 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
ITGB2-208ENST00000397857 TOPBP1Q92547 1522 aa21.17■□□□□ 0.98
ITGB2-208ENST00000397857 POLA1P09884 1462 aaPredicted RBP21.17■□□□□ 0.98
ITGB2-208ENST00000397857 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
ITGB2-208ENST00000397857 URB2Q14146 1524 aaKnown RBP21.15■□□□□ 0.98
ITGB2-208ENST00000397857 PRDM2Q13029 1718 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms