RNA–Protein interactions for RNA: ENST00000396253.7

HPS5-203, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS5, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-203ENST00000396253 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
HPS5-203ENST00000396253 DCAF8L2P0C7V8 631 aa18.36■□□□□ 0.53
HPS5-203ENST00000396253 CCDC180Q9P1Z9 1646 aa17.53■□□□□ 0.4
HPS5-203ENST00000396253 ABCC9O60706 1549 aa17.48■□□□□ 0.39
HPS5-203ENST00000396253 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
HPS5-203ENST00000396253 NACADO15069 1562 aa16.85■□□□□ 0.29
HPS5-203ENST00000396253 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.27
HPS5-203ENST00000396253 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
HPS5-203ENST00000396253 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
HPS5-203ENST00000396253 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.23
HPS5-203ENST00000396253 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
HPS5-203ENST00000396253 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
HPS5-203ENST00000396253 FAM9AQ8IZU1 332 aaPredicted RBP16.41■□□□□ 0.22
HPS5-203ENST00000396253 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
HPS5-203ENST00000396253 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
HPS5-203ENST00000396253 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
HPS5-203ENST00000396253 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
HPS5-203ENST00000396253 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
HPS5-203ENST00000396253 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
HPS5-203ENST00000396253 TRIM41Q8WV44 630 aa15.69■□□□□ 0.1
HPS5-203ENST00000396253 PDS5BQ9NTI5 1447 aa15.61■□□□□ 0.09
HPS5-203ENST00000396253 APLP2Q06481 763 aa15.59■□□□□ 0.09
HPS5-203ENST00000396253 EIF4G1Q04637 1599 aaKnown RBP15.52■□□□□ 0.07
HPS5-203ENST00000396253 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
HPS5-203ENST00000396253 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
HPS5-203ENST00000396253 RSF1Q96T23 1441 aaPredicted RBP15.44■□□□□ 0.06
HPS5-203ENST00000396253 FBLN2P98095 1184 aa15.41■□□□□ 0.06
HPS5-203ENST00000396253 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
HPS5-203ENST00000396253 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
HPS5-203ENST00000396253 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
HPS5-203ENST00000396253 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
HPS5-203ENST00000396253 BICRAQ9NZM4 1560 aa15.33■□□□□ 0.04
HPS5-203ENST00000396253 ABCC8Q09428 1581 aa15.3■□□□□ 0.04
HPS5-203ENST00000396253 HMGXB3Q12766 1538 aa15.29■□□□□ 0.04
HPS5-203ENST00000396253 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.041e-9■■■■■ 69
HPS5-203ENST00000396253 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
HPS5-203ENST00000396253 MROH2BQ7Z745 1585 aa15.26■□□□□ 0.03
HPS5-203ENST00000396253 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
HPS5-203ENST00000396253 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
HPS5-203ENST00000396253 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
HPS5-203ENST00000396253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
HPS5-203ENST00000396253 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
HPS5-203ENST00000396253 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
HPS5-203ENST00000396253 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
HPS5-203ENST00000396253 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
HPS5-203ENST00000396253 UNC13AQ9UPW8 1703 aa15.1■□□□□ 0.01
HPS5-203ENST00000396253 RANGAP1P46060 587 aaPredicted RBP15.08■□□□□ 0
HPS5-203ENST00000396253 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0
HPS5-203ENST00000396253 TTBK1Q5TCY1 1321 aaPredicted RBP15.05■□□□□ -0
HPS5-203ENST00000396253 CCDC88BA6NC98 1476 aa15.04■□□□□ -0
HPS5-203ENST00000396253 LAMC3Q9Y6N6 1575 aa15.04■□□□□ -0
HPS5-203ENST00000396253 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
HPS5-203ENST00000396253 KIF27Q86VH2 1401 aa15.03■□□□□ -0
HPS5-203ENST00000396253 MYT1LQ9UL68 1186 aa15.02■□□□□ -0
HPS5-203ENST00000396253 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
HPS5-203ENST00000396253 EEA1Q15075 1411 aa15.01□□□□□ -0.01
HPS5-203ENST00000396253 WIZO95785 1651 aa14.98□□□□□ -0.01
HPS5-203ENST00000396253 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
HPS5-203ENST00000396253 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
HPS5-203ENST00000396253 SOGA1O94964 1423 aa14.97□□□□□ -0.01
HPS5-203ENST00000396253 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
HPS5-203ENST00000396253 CFTRP13569 1480 aa14.91□□□□□ -0.02
HPS5-203ENST00000396253 CHIC1Q5VXU3 224 aa14.9□□□□□ -0.02
HPS5-203ENST00000396253 CUX2O14529 1486 aa14.88□□□□□ -0.03
HPS5-203ENST00000396253 IFT140Q96RY7 1462 aa14.87□□□□□ -0.03
HPS5-203ENST00000396253 CARMIL2Q6F5E8 1435 aa14.84□□□□□ -0.03
HPS5-203ENST00000396253 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
HPS5-203ENST00000396253 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
HPS5-203ENST00000396253 ESF1Q9H501 851 aaKnown RBP14.73□□□□□ -0.05
HPS5-203ENST00000396253 CARMIL1Q5VZK9 1371 aa14.73□□□□□ -0.05
HPS5-203ENST00000396253 NESP48681 1621 aa14.72□□□□□ -0.05
HPS5-203ENST00000396253 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
HPS5-203ENST00000396253 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
HPS5-203ENST00000396253 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
HPS5-203ENST00000396253 PLEKHD1A6NEE1 506 aa14.66□□□□□ -0.06
HPS5-203ENST00000396253 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
HPS5-203ENST00000396253 TOPBP1Q92547 1522 aa14.64□□□□□ -0.07
HPS5-203ENST00000396253 GOLGA3Q08378 1498 aa14.62□□□□□ -0.07
HPS5-203ENST00000396253 FHAD1B1AJZ9 1412 aa14.59□□□□□ -0.07
HPS5-203ENST00000396253 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
HPS5-203ENST00000396253 JPH4Q96JJ6 628 aa14.56□□□□□ -0.08
HPS5-203ENST00000396253 RAPGEF2Q9Y4G8 1499 aa14.53□□□□□ -0.08
HPS5-203ENST00000396253 MAGI1Q96QZ7 1491 aaPredicted RBP14.52□□□□□ -0.09
HPS5-203ENST00000396253 CYB5RLQ6IPT4 315 aa14.5□□□□□ -0.09
HPS5-203ENST00000396253 ACIN1Q9UKV3 1341 aaKnown RBP14.5□□□□□ -0.09
HPS5-203ENST00000396253 POLA1P09884 1462 aaPredicted RBP14.49□□□□□ -0.09
HPS5-203ENST00000396253 CLIP1P30622 1438 aa14.48□□□□□ -0.09
HPS5-203ENST00000396253 AQRO60306 1485 aaKnown RBP eCLIP14.48□□□□□ -0.095e-6■■■□□ 16.9
HPS5-203ENST00000396253 PTPRGP23470 1445 aa14.46□□□□□ -0.09
HPS5-203ENST00000396253 RAD54L2Q9Y4B4 1467 aa14.46□□□□□ -0.1
HPS5-203ENST00000396253 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
HPS5-203ENST00000396253 KCNH8Q96L42 1107 aa14.44□□□□□ -0.1
HPS5-203ENST00000396253 SYNJ1O43426 1573 aa14.44□□□□□ -0.1
HPS5-203ENST00000396253 WDR62O43379 1518 aa14.43□□□□□ -0.1
HPS5-203ENST00000396253 TSPY4P0CV99 314 aa14.43□□□□□ -0.1
HPS5-203ENST00000396253 TSPY10P0CW01 314 aa14.43□□□□□ -0.1
HPS5-203ENST00000396253 SYNJ2O15056 1496 aa14.42□□□□□ -0.1
HPS5-203ENST00000396253 ABCA10Q8WWZ4 1543 aa14.42□□□□□ -0.1
HPS5-203ENST00000396253 ARID3CA6NKF2 412 aa14.42□□□□□ -0.1
HPS5-203ENST00000396253 FMN1Q68DA7 1419 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms