RNA–Protein interactions for RNA: ENST00000396194.6

GEM-202, Transcript of GTP binding protein overexpressed in skeletal muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GEM, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEM-202ENST00000396194 NISCHQ9Y2I1 1504 aa35.25■■■■□ 3.23
GEM-202ENST00000396194 CCDC180Q9P1Z9 1646 aa30.38■■■□□ 2.45
GEM-202ENST00000396194 ZCCHC6Q5VYS8 1495 aaKnown RBP29.73■■■□□ 2.35
GEM-202ENST00000396194 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
GEM-202ENST00000396194 DCAF1Q9Y4B6 1507 aa29.12■■■□□ 2.25
GEM-202ENST00000396194 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
GEM-202ENST00000396194 SUPT5HO00267 1087 aaKnown RBP28.55■■■□□ 2.16
GEM-202ENST00000396194 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
GEM-202ENST00000396194 ABCC9O60706 1549 aa28.24■■■□□ 2.11
GEM-202ENST00000396194 NACADO15069 1562 aa28.18■■■□□ 2.1
GEM-202ENST00000396194 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
GEM-202ENST00000396194 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
GEM-202ENST00000396194 CHIC1Q5VXU3 224 aa27.63■■■□□ 2.01
GEM-202ENST00000396194 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
GEM-202ENST00000396194 CECR2Q9BXF3 1484 aa27.36■■□□□ 1.97
GEM-202ENST00000396194 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
GEM-202ENST00000396194 UNC13AQ9UPW8 1703 aa27.21■■□□□ 1.95
GEM-202ENST00000396194 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
GEM-202ENST00000396194 WIZO95785 1651 aa27.07■■□□□ 1.92
GEM-202ENST00000396194 SMARCA4P51532 1647 aa26.95■■□□□ 1.9
GEM-202ENST00000396194 BICRAQ9NZM4 1560 aa26.91■■□□□ 1.9
GEM-202ENST00000396194 TOP2AP11388 1531 aaKnown RBP26.8■■□□□ 1.88
GEM-202ENST00000396194 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
GEM-202ENST00000396194 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
GEM-202ENST00000396194 LOC105371045A0A1W2PR82 267 aa26.62■■□□□ 1.85
GEM-202ENST00000396194 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
GEM-202ENST00000396194 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
GEM-202ENST00000396194 PEG3Q9GZU2 1588 aa26.57■■□□□ 1.84
GEM-202ENST00000396194 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
GEM-202ENST00000396194 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
GEM-202ENST00000396194 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.81
GEM-202ENST00000396194 BAZ1BQ9UIG0 1483 aaKnown RBP26.27■■□□□ 1.8
GEM-202ENST00000396194 ABCC8Q09428 1581 aa26.22■■□□□ 1.79
GEM-202ENST00000396194 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.77
GEM-202ENST00000396194 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
GEM-202ENST00000396194 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
GEM-202ENST00000396194 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
GEM-202ENST00000396194 EEA1Q15075 1411 aa25.97■■□□□ 1.75
GEM-202ENST00000396194 EHMT2Q96KQ7 1210 aa25.96■■□□□ 1.75
GEM-202ENST00000396194 TRIM26Q12899 539 aaPredicted RBP25.95■■□□□ 1.74
GEM-202ENST00000396194 HRCP23327 699 aa25.9■■□□□ 1.74
GEM-202ENST00000396194 SOGA1O94964 1423 aa25.89■■□□□ 1.73
GEM-202ENST00000396194 SYNJ1O43426 1573 aa25.83■■□□□ 1.72
GEM-202ENST00000396194 CSRNP3Q8WYN3 585 aa25.79■■□□□ 1.72
GEM-202ENST00000396194 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
GEM-202ENST00000396194 TNIKQ9UKE5 1360 aa25.7■■□□□ 1.7
GEM-202ENST00000396194 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
GEM-202ENST00000396194 GOLGA3Q08378 1498 aa25.65■■□□□ 1.7
GEM-202ENST00000396194 CFTRP13569 1480 aa25.63■■□□□ 1.69
GEM-202ENST00000396194 BIVM-ERCC5R4GMW8 1640 aa25.61■■□□□ 1.69
GEM-202ENST00000396194 CEP162Q5TB80 1403 aa25.61■■□□□ 1.69
GEM-202ENST00000396194 CEP164Q9UPV0 1460 aa25.58■■□□□ 1.69
GEM-202ENST00000396194 KIF21BO75037 1637 aa25.56■■□□□ 1.68
GEM-202ENST00000396194 UBTFP17480 764 aaKnown RBP25.56■■□□□ 1.68
GEM-202ENST00000396194 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
GEM-202ENST00000396194 PRDM2Q13029 1718 aa25.47■■□□□ 1.67
GEM-202ENST00000396194 CUX1P39880 1505 aa25.44■■□□□ 1.66
GEM-202ENST00000396194 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
GEM-202ENST00000396194 PPARGC1BQ86YN6 1023 aaKnown RBP25.34■■□□□ 1.65
GEM-202ENST00000396194 RAPGEF2Q9Y4G8 1499 aa25.33■■□□□ 1.64
GEM-202ENST00000396194 KIF27Q86VH2 1401 aa25.29■■□□□ 1.64
GEM-202ENST00000396194 ZEB1P37275 1124 aaPredicted RBP25.28■■□□□ 1.64
GEM-202ENST00000396194 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
GEM-202ENST00000396194 CLIP1P30622 1438 aa25.27■■□□□ 1.64
GEM-202ENST00000396194 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
GEM-202ENST00000396194 FANCD2Q9BXW9 1451 aa25.14■■□□□ 1.62
GEM-202ENST00000396194 VPS8Q8N3P4 1428 aa25.13■■□□□ 1.61
GEM-202ENST00000396194 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
GEM-202ENST00000396194 CUX2O14529 1486 aa25.07■■□□□ 1.6
GEM-202ENST00000396194 TTBK1Q5TCY1 1321 aaPredicted RBP25.02■■□□□ 1.6
GEM-202ENST00000396194 LAMC3Q9Y6N6 1575 aa25.02■■□□□ 1.6
GEM-202ENST00000396194 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
GEM-202ENST00000396194 APLP2Q06481 763 aa24.99■■□□□ 1.59
GEM-202ENST00000396194 IGF1RP08069 1367 aa24.98■■□□□ 1.59
GEM-202ENST00000396194 NESP48681 1621 aa24.98■■□□□ 1.59
GEM-202ENST00000396194 RANGAP1P46060 587 aaPredicted RBP24.97■■□□□ 1.59
GEM-202ENST00000396194 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
GEM-202ENST00000396194 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
GEM-202ENST00000396194 CARMIL1Q5VZK9 1371 aa24.89■■□□□ 1.57
GEM-202ENST00000396194 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
GEM-202ENST00000396194 POLA1P09884 1462 aaPredicted RBP24.87■■□□□ 1.57
GEM-202ENST00000396194 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
GEM-202ENST00000396194 CCER1Q8TC90 406 aaPredicted RBP24.84■■□□□ 1.57
GEM-202ENST00000396194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.57
GEM-202ENST00000396194 RAD54L2Q9Y4B4 1467 aa24.8■■□□□ 1.56
GEM-202ENST00000396194 ARHGAP35Q9NRY4 1499 aa24.79■■□□□ 1.56
GEM-202ENST00000396194 URB2Q14146 1524 aaKnown RBP24.77■■□□□ 1.56
GEM-202ENST00000396194 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
GEM-202ENST00000396194 CUL7Q14999 1698 aa24.7■■□□□ 1.55
GEM-202ENST00000396194 WDR97A6NE52 1622 aa24.67■■□□□ 1.54
GEM-202ENST00000396194 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.54
GEM-202ENST00000396194 ABCA5Q8WWZ7 1642 aa24.59■■□□□ 1.53
GEM-202ENST00000396194 HNRNPUL2Q1KMD3 747 aaKnown RBP24.59■■□□□ 1.53
GEM-202ENST00000396194 KANK4Q5T7N3 995 aaPredicted RBP24.58■■□□□ 1.52
GEM-202ENST00000396194 MAP3K1Q13233 1512 aa24.56■■□□□ 1.52
GEM-202ENST00000396194 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
GEM-202ENST00000396194 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
GEM-202ENST00000396194 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
GEM-202ENST00000396194 EFCAB5A4FU69 1503 aa24.52■■□□□ 1.52
GEM-202ENST00000396194 CTTNBP2Q8WZ74 1663 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms