RNA–Protein interactions for RNA: ENST00000396184.7

PDE1C-203, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 8,852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-203ENST00000396184 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
PDE1C-203ENST00000396184 MYT1Q01538 1121 aa11.29□□□□□ -0.6
PDE1C-203ENST00000396184 ERICH6Q7L0X2 663 aa10.96□□□□□ -0.66
PDE1C-203ENST00000396184 DCAF8L2P0C7V8 631 aa10.83□□□□□ -0.68
PDE1C-203ENST00000396184 CENPBP07199 599 aaPredicted RBP10.81□□□□□ -0.68
PDE1C-203ENST00000396184 CCER1Q8TC90 406 aaPredicted RBP10.79□□□□□ -0.68
PDE1C-203ENST00000396184 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
PDE1C-203ENST00000396184 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
PDE1C-203ENST00000396184 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
PDE1C-203ENST00000396184 EHMT2Q96KQ7 1210 aa10.57□□□□□ -0.72
PDE1C-203ENST00000396184 ZEB1P37275 1124 aaPredicted RBP10.5□□□□□ -0.73
PDE1C-203ENST00000396184 YTHDC1Q96MU7 727 aaKnown RBP10.47□□□□□ -0.73
PDE1C-203ENST00000396184 NEFLP07196 543 aa10.46□□□□□ -0.73
PDE1C-203ENST00000396184 APLP2Q06481 763 aa10.36□□□□□ -0.75
PDE1C-203ENST00000396184 SHROOM4Q9ULL8 1493 aa10.29□□□□□ -0.76
PDE1C-203ENST00000396184 DAXXQ9UER7 740 aaPredicted RBP10.25□□□□□ -0.77
PDE1C-203ENST00000396184 RTL5Q5HYW3 569 aaPredicted RBP10.22□□□□□ -0.77
PDE1C-203ENST00000396184 HRCP23327 699 aa10.19□□□□□ -0.78
PDE1C-203ENST00000396184 FAM9AQ8IZU1 332 aaPredicted RBP10.16□□□□□ -0.78
PDE1C-203ENST00000396184 ZNF316A6NFI3 1004 aaPredicted RBP10.02□□□□□ -0.81
PDE1C-203ENST00000396184 EIF5BO60841 1220 aaKnown RBP10.02□□□□□ -0.81
PDE1C-203ENST00000396184 PPARGC1BQ86YN6 1023 aaKnown RBP10□□□□□ -0.81
PDE1C-203ENST00000396184 GTF3C3Q9Y5Q9 886 aa10□□□□□ -0.81
PDE1C-203ENST00000396184 TRIM26Q12899 539 aaPredicted RBP9.98□□□□□ -0.81
PDE1C-203ENST00000396184 GLIPR1L2Q4G1C9 344 aa9.97□□□□□ -0.81
PDE1C-203ENST00000396184 RANGAP1P46060 587 aaPredicted RBP9.92□□□□□ -0.82
PDE1C-203ENST00000396184 DIEXFQ68CQ4 756 aaKnown RBP9.9□□□□□ -0.82
PDE1C-203ENST00000396184 BCANQ96GW7 911 aa9.86□□□□□ -0.83
PDE1C-203ENST00000396184 TRIM41Q8WV44 630 aa9.85□□□□□ -0.83
PDE1C-203ENST00000396184 CLSPNQ9HAW4 1339 aa9.84□□□□□ -0.83
PDE1C-203ENST00000396184 CDK11AQ9UQ88 783 aaPredicted RBP9.81□□□□□ -0.84
PDE1C-203ENST00000396184 ATP1B4Q9UN42 357 aaPredicted RBP9.8□□□□□ -0.84
PDE1C-203ENST00000396184 UBTFP17480 764 aaKnown RBP9.78□□□□□ -0.84
PDE1C-203ENST00000396184 ACIN1Q9UKV3 1341 aaKnown RBP9.77□□□□□ -0.85
PDE1C-203ENST00000396184 POLR3GLQ9BT43 218 aa9.76□□□□□ -0.85
PDE1C-203ENST00000396184 CNGB1Q14028 1251 aaPredicted RBP9.73□□□□□ -0.85
PDE1C-203ENST00000396184 MYT1LQ9UL68 1186 aa9.72□□□□□ -0.85
PDE1C-203ENST00000396184 ANP32AP39687 249 aaKnown RBP9.69□□□□□ -0.86
PDE1C-203ENST00000396184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.69□□□□□ -0.86
PDE1C-203ENST00000396184 NISCHQ9Y2I1 1504 aa9.65□□□□□ -0.86
PDE1C-203ENST00000396184 HNRNPUL2Q1KMD3 747 aaKnown RBP9.63□□□□□ -0.87
PDE1C-203ENST00000396184 ITGAEP38570 1179 aa9.63□□□□□ -0.87
PDE1C-203ENST00000396184 NBR1Q14596 966 aa9.61□□□□□ -0.87
PDE1C-203ENST00000396184 NPM2Q86SE8 214 aaKnown RBP9.59□□□□□ -0.87
PDE1C-203ENST00000396184 ANP32BQ92688 251 aaKnown RBP9.59□□□□□ -0.87
PDE1C-203ENST00000396184 BCL11AQ9H165 835 aa9.58□□□□□ -0.88
PDE1C-203ENST00000396184 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
PDE1C-203ENST00000396184 SCAF1Q9H7N4 1312 aaKnown RBP9.57□□□□□ -0.88
PDE1C-203ENST00000396184 ANP32EQ9BTT0 268 aa9.52□□□□□ -0.88
PDE1C-203ENST00000396184 ANP32CO43423 234 aa9.52□□□□□ -0.89
PDE1C-203ENST00000396184 FKBP8Q14318 412 aa9.49□□□□□ -0.89
PDE1C-203ENST00000396184 TNNT2P45379 298 aaPredicted RBP9.49□□□□□ -0.89
PDE1C-203ENST00000396184 ARXQ96QS3 562 aa9.47□□□□□ -0.89
PDE1C-203ENST00000396184 NEUROD1Q13562 356 aa9.47□□□□□ -0.89
PDE1C-203ENST00000396184 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.89
PDE1C-203ENST00000396184 SLC4A1APQ9BWU0 796 aaKnown RBP9.45□□□□□ -0.9
PDE1C-203ENST00000396184 RTN4Q9NQC3 1192 aaKnown RBP9.44□□□□□ -0.9
PDE1C-203ENST00000396184 HSP90AA1P07900 732 aaKnown RBP9.41□□□□□ -0.9
PDE1C-203ENST00000396184 CANXP27824 592 aaKnown RBP9.41□□□□□ -0.9
PDE1C-203ENST00000396184 CDK11BP21127 795 aaKnown RBP9.41□□□□□ -0.9
PDE1C-203ENST00000396184 CHIC1Q5VXU3 224 aa9.4□□□□□ -0.9
PDE1C-203ENST00000396184 NAP1L5Q96NT1 182 aaPredicted RBP9.36□□□□□ -0.91
PDE1C-203ENST00000396184 UPF2Q9HAU5 1272 aaKnown RBP9.35□□□□□ -0.91
PDE1C-203ENST00000396184 ERICH6BQ5W0A0 696 aa9.34□□□□□ -0.91
PDE1C-203ENST00000396184 TRIM44Q96DX7 344 aaPredicted RBP9.34□□□□□ -0.91
PDE1C-203ENST00000396184 AMER1Q5JTC6 1135 aaPredicted RBP9.33□□□□□ -0.92
PDE1C-203ENST00000396184 NEFMP07197 916 aa9.32□□□□□ -0.92
PDE1C-203ENST00000396184 CCDC136Q96JN2 1154 aa9.29□□□□□ -0.92
PDE1C-203ENST00000396184 FAM50AQ14320 339 aaKnown RBP9.27□□□□□ -0.93
PDE1C-203ENST00000396184 HNRNPUQ00839 825 aaKnown RBP eCLIP9.27□□□□□ -0.93
PDE1C-203ENST00000396184 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.27□□□□□ -0.93
PDE1C-203ENST00000396184 NCLP19338 710 aaKnown RBP9.25□□□□□ -0.93
PDE1C-203ENST00000396184 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
PDE1C-203ENST00000396184 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
PDE1C-203ENST00000396184 DEKP35659 375 aaKnown RBP9.24□□□□□ -0.93
PDE1C-203ENST00000396184 DNTTIP2Q5QJE6 756 aaKnown RBP9.21□□□□□ -0.93
PDE1C-203ENST00000396184 DDRGK1Q96HY6 314 aa9.21□□□□□ -0.94
PDE1C-203ENST00000396184 IRX6P78412 446 aaPredicted RBP9.21□□□□□ -0.94
PDE1C-203ENST00000396184 FAM9BQ8IZU0 186 aa9.17□□□□□ -0.94
PDE1C-203ENST00000396184 PPM1GO15355 546 aaPredicted RBP9.17□□□□□ -0.94
PDE1C-203ENST00000396184 NOP58Q9Y2X3 529 aaKnown RBP9.17□□□□□ -0.94
PDE1C-203ENST00000396184 SLC24A1O60721 1099 aa9.17□□□□□ -0.94
PDE1C-203ENST00000396184 PTMAP06454 111 aaKnown RBP9.17□□□□□ -0.94
PDE1C-203ENST00000396184 BECN1Q14457 450 aa9.17□□□□□ -0.94
PDE1C-203ENST00000396184 ARID4BQ4LE39 1312 aaPredicted RBP9.16□□□□□ -0.94
PDE1C-203ENST00000396184 LAS1LQ9Y4W2 734 aaKnown RBP9.16□□□□□ -0.94
PDE1C-203ENST00000396184 CSRNP3Q8WYN3 585 aa9.15□□□□□ -0.94
PDE1C-203ENST00000396184 MIER1Q8N108 512 aa9.15□□□□□ -0.94
PDE1C-203ENST00000396184 DDX10Q13206 875 aaKnown RBP9.13□□□□□ -0.95
PDE1C-203ENST00000396184 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.13□□□□□ -0.95
PDE1C-203ENST00000396184 GOLGA6L22H0YM25 854 aa9.13□□□□□ -0.95
PDE1C-203ENST00000396184 SALL2Q9Y467 1007 aaPredicted RBP9.11□□□□□ -0.95
PDE1C-203ENST00000396184 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
PDE1C-203ENST00000396184 TNNT3P45378 269 aaPredicted RBP9.07□□□□□ -0.96
PDE1C-203ENST00000396184 ARID3AQ99856 593 aa9.07□□□□□ -0.96
PDE1C-203ENST00000396184 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
PDE1C-203ENST00000396184 MSNP26038 577 aaKnown RBP9.05□□□□□ -0.96
PDE1C-203ENST00000396184 L1TD1Q5T7N2 865 aaKnown RBP9.04□□□□□ -0.96
PDE1C-203ENST00000396184 HSP90AA2PQ14568 343 aaPredicted RBP9.03□□□□□ -0.96
PDE1C-203ENST00000396184 CHAF1AQ13111 956 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms