RNA–Protein interactions for RNA: ENST00000396170.5

PTPN5-204, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 2 BASIC

Gene PTPN5, Length 3,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-204ENST00000396170 NISCHQ9Y2I1 1504 aa29.62■■■□□ 2.33
PTPN5-204ENST00000396170 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
PTPN5-204ENST00000396170 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
PTPN5-204ENST00000396170 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
PTPN5-204ENST00000396170 ABCC9O60706 1549 aa25.97■■□□□ 1.75
PTPN5-204ENST00000396170 EHMT2Q96KQ7 1210 aa25.86■■□□□ 1.73
PTPN5-204ENST00000396170 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
PTPN5-204ENST00000396170 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
PTPN5-204ENST00000396170 RANGAP1P46060 587 aaPredicted RBP24.83■■□□□ 1.56
PTPN5-204ENST00000396170 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
PTPN5-204ENST00000396170 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
PTPN5-204ENST00000396170 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
PTPN5-204ENST00000396170 CCDC180Q9P1Z9 1646 aa24.51■■□□□ 1.51
PTPN5-204ENST00000396170 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
PTPN5-204ENST00000396170 PPARGC1BQ86YN6 1023 aaKnown RBP24.25■■□□□ 1.47
PTPN5-204ENST00000396170 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.47
PTPN5-204ENST00000396170 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
PTPN5-204ENST00000396170 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
PTPN5-204ENST00000396170 HRCP23327 699 aa24.16■■□□□ 1.46
PTPN5-204ENST00000396170 ATP1B4Q9UN42 357 aaPredicted RBP24.12■■□□□ 1.45
PTPN5-204ENST00000396170 PCGF6Q9BYE7 350 aa24.12■■□□□ 1.45
PTPN5-204ENST00000396170 APLP2Q06481 763 aa23.9■■□□□ 1.42
PTPN5-204ENST00000396170 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
PTPN5-204ENST00000396170 PELP1Q8IZL8 1130 aaKnown RBP23.73■■□□□ 1.39
PTPN5-204ENST00000396170 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
PTPN5-204ENST00000396170 NACADO15069 1562 aa23.68■■□□□ 1.38
PTPN5-204ENST00000396170 FBLN2P98095 1184 aa23.58■■□□□ 1.36
PTPN5-204ENST00000396170 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
PTPN5-204ENST00000396170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.45■■□□□ 1.34
PTPN5-204ENST00000396170 HNRNPUL2Q1KMD3 747 aaKnown RBP23.45■■□□□ 1.34
PTPN5-204ENST00000396170 ITGAEP38570 1179 aa23.38■■□□□ 1.33
PTPN5-204ENST00000396170 P3H3Q8IVL6 736 aa23.33■■□□□ 1.32
PTPN5-204ENST00000396170 ARID3CA6NKF2 412 aa23.32■■□□□ 1.32
PTPN5-204ENST00000396170 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
PTPN5-204ENST00000396170 SCAF1Q9H7N4 1312 aaKnown RBP23.24■■□□□ 1.31
PTPN5-204ENST00000396170 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
PTPN5-204ENST00000396170 BAZ1BQ9UIG0 1483 aaKnown RBP23.12■■□□□ 1.29
PTPN5-204ENST00000396170 CSRNP3Q8WYN3 585 aa23.12■■□□□ 1.29
PTPN5-204ENST00000396170 CCER1Q8TC90 406 aaPredicted RBP23.05■■□□□ 1.28
PTPN5-204ENST00000396170 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
PTPN5-204ENST00000396170 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
PTPN5-204ENST00000396170 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
PTPN5-204ENST00000396170 WIZO95785 1651 aa22.88■■□□□ 1.25
PTPN5-204ENST00000396170 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
PTPN5-204ENST00000396170 MYT1Q01538 1121 aa22.81■■□□□ 1.24
PTPN5-204ENST00000396170 TRIM26Q12899 539 aaPredicted RBP22.8■■□□□ 1.24
PTPN5-204ENST00000396170 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
PTPN5-204ENST00000396170 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.23
PTPN5-204ENST00000396170 WRNQ14191 1432 aaPredicted RBP eCLIP22.7■■□□□ 1.23
PTPN5-204ENST00000396170 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
PTPN5-204ENST00000396170 GTF3C3Q9Y5Q9 886 aa22.67■■□□□ 1.22
PTPN5-204ENST00000396170 ERCC6Q03468 1493 aa22.67■■□□□ 1.22
PTPN5-204ENST00000396170 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
PTPN5-204ENST00000396170 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
PTPN5-204ENST00000396170 NEUROD1Q13562 356 aa22.59■■□□□ 1.21
PTPN5-204ENST00000396170 SOGA1O94964 1423 aa22.57■■□□□ 1.2
PTPN5-204ENST00000396170 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
PTPN5-204ENST00000396170 SMARCA4P51532 1647 aa22.52■■□□□ 1.2
PTPN5-204ENST00000396170 ZEB1P37275 1124 aaPredicted RBP22.52■■□□□ 1.19
PTPN5-204ENST00000396170 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
PTPN5-204ENST00000396170 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
PTPN5-204ENST00000396170 YTHDC1Q96MU7 727 aaKnown RBP22.49■■□□□ 1.19
PTPN5-204ENST00000396170 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
PTPN5-204ENST00000396170 CNGB1Q14028 1251 aaPredicted RBP22.44■■□□□ 1.18
PTPN5-204ENST00000396170 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
PTPN5-204ENST00000396170 EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
PTPN5-204ENST00000396170 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
PTPN5-204ENST00000396170 TRIM52Q96A61 297 aa22.35■■□□□ 1.17
PTPN5-204ENST00000396170 TOP2AP11388 1531 aaKnown RBP22.34■■□□□ 1.17
PTPN5-204ENST00000396170 CUX2O14529 1486 aa22.34■■□□□ 1.17
PTPN5-204ENST00000396170 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.16
PTPN5-204ENST00000396170 POLR3GLQ9BT43 218 aa22.32■■□□□ 1.16
PTPN5-204ENST00000396170 KCNH8Q96L42 1107 aa22.3■■□□□ 1.16
PTPN5-204ENST00000396170 NESP48681 1621 aa22.28■■□□□ 1.16
PTPN5-204ENST00000396170 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
PTPN5-204ENST00000396170 CHIC2Q9UKJ5 165 aa22.27■■□□□ 1.16
PTPN5-204ENST00000396170 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
PTPN5-204ENST00000396170 RUSC2Q8N2Y8 1516 aa22.24■■□□□ 1.15
PTPN5-204ENST00000396170 CLIP1P30622 1438 aa22.24■■□□□ 1.15
PTPN5-204ENST00000396170 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
PTPN5-204ENST00000396170 CC2D2AQ9P2K1 1620 aa22.16■■□□□ 1.14
PTPN5-204ENST00000396170 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
PTPN5-204ENST00000396170 CARMIL1Q5VZK9 1371 aa22.16■■□□□ 1.14
PTPN5-204ENST00000396170 DIEXFQ68CQ4 756 aaKnown RBP22.15■■□□□ 1.14
PTPN5-204ENST00000396170 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
PTPN5-204ENST00000396170 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
PTPN5-204ENST00000396170 NCAPD3P42695 1498 aa22.12■■□□□ 1.13
PTPN5-204ENST00000396170 NPM1P06748 294 aaKnown RBP eCLIP22.12■■□□□ 1.13
PTPN5-204ENST00000396170 CDK11AQ9UQ88 783 aaPredicted RBP22.07■■□□□ 1.12
PTPN5-204ENST00000396170 SENP3Q9H4L4 574 aaPredicted RBP22.06■■□□□ 1.12
PTPN5-204ENST00000396170 GOLGA3Q08378 1498 aa22.06■■□□□ 1.12
PTPN5-204ENST00000396170 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
PTPN5-204ENST00000396170 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
PTPN5-204ENST00000396170 CEP164Q9UPV0 1460 aa22.02■■□□□ 1.12
PTPN5-204ENST00000396170 MTUS2Q5JR59 1369 aa22.02■■□□□ 1.11
PTPN5-204ENST00000396170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.97■■□□□ 1.11
PTPN5-204ENST00000396170 EEA1Q15075 1411 aa21.94■■□□□ 1.1
PTPN5-204ENST00000396170 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
PTPN5-204ENST00000396170 TNIKQ9UKE5 1360 aa21.92■■□□□ 1.1
PTPN5-204ENST00000396170 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms