RNA–Protein interactions for RNA: ENST00000395456.6

LAT-203, Transcript of linker for activation of T cells, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAT, Length 1,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAT-203ENST00000395456 NISCHQ9Y2I1 1504 aa38.3■■■■□ 3.72
LAT-203ENST00000395456 CCDC180Q9P1Z9 1646 aa33.24■■■□□ 2.91
LAT-203ENST00000395456 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
LAT-203ENST00000395456 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
LAT-203ENST00000395456 ABCC9O60706 1549 aa31.72■■■□□ 2.67
LAT-203ENST00000395456 SHROOM4Q9ULL8 1493 aa31.44■■■□□ 2.62
LAT-203ENST00000395456 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
LAT-203ENST00000395456 MYO15BQ96JP2 1530 aa31.21■■■□□ 2.59
LAT-203ENST00000395456 NACADO15069 1562 aa30.83■■■□□ 2.53
LAT-203ENST00000395456 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
LAT-203ENST00000395456 SCRIBQ14160 1630 aa30.52■■■□□ 2.48
LAT-203ENST00000395456 RB1CC1Q8TDY2 1594 aa30.43■■■□□ 2.46
LAT-203ENST00000395456 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
LAT-203ENST00000395456 DNAJC5BQ9UF47 199 aa29.85■■■□□ 2.37
LAT-203ENST00000395456 UNC13AQ9UPW8 1703 aa29.84■■■□□ 2.37
LAT-203ENST00000395456 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
LAT-203ENST00000395456 MROH2BQ7Z745 1585 aa29.57■■■□□ 2.32
LAT-203ENST00000395456 BAZ1AQ9NRL2 1556 aaPredicted RBP29.55■■■□□ 2.32
LAT-203ENST00000395456 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
LAT-203ENST00000395456 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
LAT-203ENST00000395456 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
LAT-203ENST00000395456 WIZO95785 1651 aa29.37■■■□□ 2.29
LAT-203ENST00000395456 SMARCA4P51532 1647 aa29.35■■■□□ 2.29
LAT-203ENST00000395456 TOP2AP11388 1531 aaKnown RBP29.11■■■□□ 2.25
LAT-203ENST00000395456 PEG3Q9GZU2 1588 aa29.01■■■□□ 2.24
LAT-203ENST00000395456 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
LAT-203ENST00000395456 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
LAT-203ENST00000395456 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
LAT-203ENST00000395456 TRIM41Q8WV44 630 aa28.73■■■□□ 2.19
LAT-203ENST00000395456 ATAD2BQ9ULI0 1458 aa28.73■■■□□ 2.19
LAT-203ENST00000395456 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
LAT-203ENST00000395456 BAZ1BQ9UIG0 1483 aaKnown RBP28.59■■■□□ 2.17
LAT-203ENST00000395456 HMGXB3Q12766 1538 aa28.44■■■□□ 2.14
LAT-203ENST00000395456 NCAPD3P42695 1498 aa28.43■■■□□ 2.14
LAT-203ENST00000395456 LOC105371045A0A1W2PR82 267 aa28.37■■■□□ 2.13
LAT-203ENST00000395456 ABCC8Q09428 1581 aa28.3■■■□□ 2.12
LAT-203ENST00000395456 FAM9AQ8IZU1 332 aaPredicted RBP28.13■■■□□ 2.09
LAT-203ENST00000395456 WRNQ14191 1432 aaPredicted RBP eCLIP28.11■■■□□ 2.09
LAT-203ENST00000395456 EEA1Q15075 1411 aa28.04■■■□□ 2.08
LAT-203ENST00000395456 SYNJ1O43426 1573 aa27.96■■■□□ 2.07
LAT-203ENST00000395456 CFTRP13569 1480 aa27.92■■■□□ 2.06
LAT-203ENST00000395456 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
LAT-203ENST00000395456 SOGA1O94964 1423 aa27.88■■■□□ 2.05
LAT-203ENST00000395456 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
LAT-203ENST00000395456 BIVM-ERCC5R4GMW8 1640 aa27.84■■■□□ 2.05
LAT-203ENST00000395456 CSRNP3Q8WYN3 585 aa27.78■■■□□ 2.04
LAT-203ENST00000395456 RUSC2Q8N2Y8 1516 aa27.74■■■□□ 2.03
LAT-203ENST00000395456 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
LAT-203ENST00000395456 EHMT2Q96KQ7 1210 aa27.64■■■□□ 2.02
LAT-203ENST00000395456 TNIKQ9UKE5 1360 aa27.64■■■□□ 2.02
LAT-203ENST00000395456 CUX1P39880 1505 aa27.63■■■□□ 2.01
LAT-203ENST00000395456 KIF21BO75037 1637 aa27.63■■■□□ 2.01
LAT-203ENST00000395456 GOLGA3Q08378 1498 aa27.62■■■□□ 2.01
LAT-203ENST00000395456 PCGF6Q9BYE7 350 aa27.59■■■□□ 2.01
LAT-203ENST00000395456 CEP164Q9UPV0 1460 aa27.58■■■□□ 2.01
LAT-203ENST00000395456 TRIM26Q12899 539 aaPredicted RBP27.56■■■□□ 2
LAT-203ENST00000395456 CEP162Q5TB80 1403 aa27.48■■□□□ 1.99
LAT-203ENST00000395456 DNAJC5Q9H3Z4 198 aa27.48■■□□□ 1.99
LAT-203ENST00000395456 CUX2O14529 1486 aa27.42■■□□□ 1.98
LAT-203ENST00000395456 UBTFP17480 764 aaKnown RBP27.41■■□□□ 1.98
LAT-203ENST00000395456 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
LAT-203ENST00000395456 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
LAT-203ENST00000395456 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
LAT-203ENST00000395456 KIF27Q86VH2 1401 aa27.38■■□□□ 1.97
LAT-203ENST00000395456 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
LAT-203ENST00000395456 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
LAT-203ENST00000395456 RAPGEF2Q9Y4G8 1499 aa27.3■■□□□ 1.96
LAT-203ENST00000395456 DNMBPQ6XZF7 1577 aa27.27■■□□□ 1.96
LAT-203ENST00000395456 HRCP23327 699 aa27.26■■□□□ 1.95
LAT-203ENST00000395456 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
LAT-203ENST00000395456 NESP48681 1621 aa27.25■■□□□ 1.95
LAT-203ENST00000395456 CLIP1P30622 1438 aa27.17■■□□□ 1.94
LAT-203ENST00000395456 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
LAT-203ENST00000395456 PDS5BQ9NTI5 1447 aa27.15■■□□□ 1.94
LAT-203ENST00000395456 IGF1RP08069 1367 aa27.07■■□□□ 1.92
LAT-203ENST00000395456 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
LAT-203ENST00000395456 POLA1P09884 1462 aaPredicted RBP27.05■■□□□ 1.92
LAT-203ENST00000395456 THOC2Q8NI27 1593 aaKnown RBP27.03■■□□□ 1.92
LAT-203ENST00000395456 VPS8Q8N3P4 1428 aa27.02■■□□□ 1.92
LAT-203ENST00000395456 URB2Q14146 1524 aaKnown RBP27.01■■□□□ 1.91
LAT-203ENST00000395456 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
LAT-203ENST00000395456 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
LAT-203ENST00000395456 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
LAT-203ENST00000395456 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
LAT-203ENST00000395456 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
LAT-203ENST00000395456 CUL7Q14999 1698 aa26.88■■□□□ 1.89
LAT-203ENST00000395456 ARAP1Q96P48 1450 aa26.84■■□□□ 1.89
LAT-203ENST00000395456 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
LAT-203ENST00000395456 ZEB1P37275 1124 aaPredicted RBP26.78■■□□□ 1.88
LAT-203ENST00000395456 APLP2Q06481 763 aa26.76■■□□□ 1.87
LAT-203ENST00000395456 MRC2Q9UBG0 1479 aa26.76■■□□□ 1.87
LAT-203ENST00000395456 ARHGAP35Q9NRY4 1499 aa26.75■■□□□ 1.87
LAT-203ENST00000395456 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
LAT-203ENST00000395456 RANGAP1P46060 587 aaPredicted RBP26.72■■□□□ 1.87
LAT-203ENST00000395456 GAPVD1Q14C86 1478 aa26.7■■□□□ 1.86
LAT-203ENST00000395456 WDR62O43379 1518 aa26.65■■□□□ 1.86
LAT-203ENST00000395456 CTTNBP2Q8WZ74 1663 aa26.64■■□□□ 1.85
LAT-203ENST00000395456 TDRD9Q8NDG6 1382 aaKnown RBP26.62■■□□□ 1.85
LAT-203ENST00000395456 TTBK1Q5TCY1 1321 aaPredicted RBP26.6■■□□□ 1.85
LAT-203ENST00000395456 EFCAB5A4FU69 1503 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms