RNA–Protein interactions for RNA: ENST00000394908.8

FLOT2-202, Transcript of flotillin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FLOT2, Length 2,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT2-202ENST00000394908 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
FLOT2-202ENST00000394908 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
FLOT2-202ENST00000394908 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
FLOT2-202ENST00000394908 SHROOM4Q9ULL8 1493 aa32.44■■■□□ 2.78
FLOT2-202ENST00000394908 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
FLOT2-202ENST00000394908 DCAF1Q9Y4B6 1507 aa31.61■■■□□ 2.65
FLOT2-202ENST00000394908 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
FLOT2-202ENST00000394908 ABCC9O60706 1549 aa31.3■■■□□ 2.6
FLOT2-202ENST00000394908 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
FLOT2-202ENST00000394908 SCRIBQ14160 1630 aa30.93■■■□□ 2.54
FLOT2-202ENST00000394908 NACADO15069 1562 aa30.75■■■□□ 2.51
FLOT2-202ENST00000394908 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
FLOT2-202ENST00000394908 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
FLOT2-202ENST00000394908 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
FLOT2-202ENST00000394908 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
FLOT2-202ENST00000394908 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
FLOT2-202ENST00000394908 UNC13AQ9UPW8 1703 aa29.9■■■□□ 2.38
FLOT2-202ENST00000394908 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
FLOT2-202ENST00000394908 WIZO95785 1651 aa29.75■■■□□ 2.35
FLOT2-202ENST00000394908 BAZ1AQ9NRL2 1556 aaPredicted RBP29.66■■■□□ 2.34
FLOT2-202ENST00000394908 BICRAQ9NZM4 1560 aa29.61■■■□□ 2.33
FLOT2-202ENST00000394908 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
FLOT2-202ENST00000394908 TRIM41Q8WV44 630 aa29.37■■■□□ 2.29
FLOT2-202ENST00000394908 LOC105371045A0A1W2PR82 267 aa29.36■■■□□ 2.29
FLOT2-202ENST00000394908 TOP2AP11388 1531 aaKnown RBP29.26■■■□□ 2.27
FLOT2-202ENST00000394908 CCDC88BA6NC98 1476 aa29.15■■■□□ 2.26
FLOT2-202ENST00000394908 FAM9AQ8IZU1 332 aaPredicted RBP29.13■■■□□ 2.25
FLOT2-202ENST00000394908 SMARCA2P51531 1590 aa29.08■■■□□ 2.25
FLOT2-202ENST00000394908 EIF4G1Q04637 1599 aaKnown RBP29.01■■■□□ 2.24
FLOT2-202ENST00000394908 PEG3Q9GZU2 1588 aa28.96■■■□□ 2.23
FLOT2-202ENST00000394908 ATAD2BQ9ULI0 1458 aa28.94■■■□□ 2.22
FLOT2-202ENST00000394908 EHMT2Q96KQ7 1210 aa28.93■■■□□ 2.22
FLOT2-202ENST00000394908 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
FLOT2-202ENST00000394908 BAZ1BQ9UIG0 1483 aaKnown RBP28.82■■■□□ 2.2
FLOT2-202ENST00000394908 PCGF6Q9BYE7 350 aa28.62■■■□□ 2.17
FLOT2-202ENST00000394908 NCAPD3P42695 1498 aa28.48■■■□□ 2.15
FLOT2-202ENST00000394908 SOGA1O94964 1423 aa28.47■■■□□ 2.15
FLOT2-202ENST00000394908 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
FLOT2-202ENST00000394908 HMGXB3Q12766 1538 aa28.4■■■□□ 2.14
FLOT2-202ENST00000394908 RUSC2Q8N2Y8 1516 aa28.37■■■□□ 2.13
FLOT2-202ENST00000394908 SYNJ1O43426 1573 aa28.33■■■□□ 2.13
FLOT2-202ENST00000394908 CSRNP3Q8WYN3 585 aa28.23■■■□□ 2.11
FLOT2-202ENST00000394908 TRIM26Q12899 539 aaPredicted RBP28.2■■■□□ 2.1
FLOT2-202ENST00000394908 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
FLOT2-202ENST00000394908 EEA1Q15075 1411 aa28.13■■■□□ 2.09
FLOT2-202ENST00000394908 PPARGC1BQ86YN6 1023 aaKnown RBP28.11■■■□□ 2.09
FLOT2-202ENST00000394908 UBTFP17480 764 aaKnown RBP28.08■■■□□ 2.09
FLOT2-202ENST00000394908 HRCP23327 699 aa28.07■■■□□ 2.08
FLOT2-202ENST00000394908 CFTRP13569 1480 aa28.07■■■□□ 2.08
FLOT2-202ENST00000394908 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
FLOT2-202ENST00000394908 CEP162Q5TB80 1403 aa27.98■■■□□ 2.07
FLOT2-202ENST00000394908 TNIKQ9UKE5 1360 aa27.97■■■□□ 2.07
FLOT2-202ENST00000394908 GOLGA3Q08378 1498 aa27.93■■■□□ 2.06
FLOT2-202ENST00000394908 CUX1P39880 1505 aa27.93■■■□□ 2.06
FLOT2-202ENST00000394908 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
FLOT2-202ENST00000394908 BIVM-ERCC5R4GMW8 1640 aa27.91■■■□□ 2.06
FLOT2-202ENST00000394908 CEP164Q9UPV0 1460 aa27.85■■■□□ 2.05
FLOT2-202ENST00000394908 TTBK1Q5TCY1 1321 aaPredicted RBP27.8■■■□□ 2.04
FLOT2-202ENST00000394908 RAPGEF2Q9Y4G8 1499 aa27.79■■■□□ 2.04
FLOT2-202ENST00000394908 KIF21BO75037 1637 aa27.77■■■□□ 2.04
FLOT2-202ENST00000394908 RANGAP1P46060 587 aaPredicted RBP27.76■■■□□ 2.03
FLOT2-202ENST00000394908 DNAJC5BQ9UF47 199 aa27.73■■■□□ 2.03
FLOT2-202ENST00000394908 PRDM2Q13029 1718 aa27.7■■■□□ 2.03
FLOT2-202ENST00000394908 NESP48681 1621 aa27.68■■■□□ 2.02
FLOT2-202ENST00000394908 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
FLOT2-202ENST00000394908 KIF27Q86VH2 1401 aa27.63■■■□□ 2.01
FLOT2-202ENST00000394908 CLIP1P30622 1438 aa27.61■■■□□ 2.01
FLOT2-202ENST00000394908 PRXQ9BXM0 1461 aa27.58■■■□□ 2.01
FLOT2-202ENST00000394908 FGD5Q6ZNL6 1462 aa27.55■■■□□ 2
FLOT2-202ENST00000394908 CUX2O14529 1486 aa27.53■■■□□ 2
FLOT2-202ENST00000394908 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
FLOT2-202ENST00000394908 IGF1RP08069 1367 aa27.42■■□□□ 1.98
FLOT2-202ENST00000394908 VPS8Q8N3P4 1428 aa27.39■■□□□ 1.97
FLOT2-202ENST00000394908 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
FLOT2-202ENST00000394908 TOPBP1Q92547 1522 aa27.37■■□□□ 1.97
FLOT2-202ENST00000394908 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
FLOT2-202ENST00000394908 DNMBPQ6XZF7 1577 aa27.35■■□□□ 1.97
FLOT2-202ENST00000394908 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
FLOT2-202ENST00000394908 CARMIL1Q5VZK9 1371 aa27.28■■□□□ 1.96
FLOT2-202ENST00000394908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.28■■□□□ 1.96
FLOT2-202ENST00000394908 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
FLOT2-202ENST00000394908 APLP2Q06481 763 aa27.26■■□□□ 1.95
FLOT2-202ENST00000394908 ARAP1Q96P48 1450 aa27.24■■□□□ 1.95
FLOT2-202ENST00000394908 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
FLOT2-202ENST00000394908 ABCA10Q8WWZ4 1543 aa27.2■■□□□ 1.94
FLOT2-202ENST00000394908 ZEB1P37275 1124 aaPredicted RBP27.2■■□□□ 1.94
FLOT2-202ENST00000394908 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.94
FLOT2-202ENST00000394908 ARHGAP35Q9NRY4 1499 aa27.14■■□□□ 1.94
FLOT2-202ENST00000394908 CCER1Q8TC90 406 aaPredicted RBP27.12■■□□□ 1.93
FLOT2-202ENST00000394908 TDRD9Q8NDG6 1382 aaKnown RBP27.11■■□□□ 1.93
FLOT2-202ENST00000394908 KANK4Q5T7N3 995 aaPredicted RBP27.06■■□□□ 1.92
FLOT2-202ENST00000394908 HNRNPUL2Q1KMD3 747 aaKnown RBP27.05■■□□□ 1.92
FLOT2-202ENST00000394908 P3H3Q8IVL6 736 aa27.02■■□□□ 1.92
FLOT2-202ENST00000394908 WDR97A6NE52 1622 aa26.96■■□□□ 1.91
FLOT2-202ENST00000394908 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
FLOT2-202ENST00000394908 ABCA5Q8WWZ7 1642 aa26.89■■□□□ 1.9
FLOT2-202ENST00000394908 CUL7Q14999 1698 aa26.89■■□□□ 1.89
FLOT2-202ENST00000394908 TARBP1Q13395 1621 aaKnown RBP26.84■■□□□ 1.89
FLOT2-202ENST00000394908 MRC2Q9UBG0 1479 aa26.84■■□□□ 1.89
FLOT2-202ENST00000394908 ATP1B4Q9UN42 357 aaPredicted RBP26.83■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms