RNA–Protein interactions for RNA: ENST00000394323.2

ERV3-1-201, Transcript of endogenous retrovirus group 3 member 1, envelope, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ERV3-1, Length 2,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERV3-1-201ENST00000394323 NISCHQ9Y2I1 1504 aa19.27■□□□□ 0.67
ERV3-1-201ENST00000394323 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
ERV3-1-201ENST00000394323 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.18
ERV3-1-201ENST00000394323 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
ERV3-1-201ENST00000394323 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
ERV3-1-201ENST00000394323 ABCC9O60706 1549 aa15.92■□□□□ 0.14
ERV3-1-201ENST00000394323 NACADO15069 1562 aa15.9■□□□□ 0.14
ERV3-1-201ENST00000394323 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
ERV3-1-201ENST00000394323 UNC13AQ9UPW8 1703 aa15.45■□□□□ 0.06
ERV3-1-201ENST00000394323 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
ERV3-1-201ENST00000394323 SCRIBQ14160 1630 aa15.36■□□□□ 0.05
ERV3-1-201ENST00000394323 BICRAQ9NZM4 1560 aa15.3■□□□□ 0.04
ERV3-1-201ENST00000394323 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
ERV3-1-201ENST00000394323 BAZ1AQ9NRL2 1556 aaPredicted RBP14.92□□□□□ -0.02
ERV3-1-201ENST00000394323 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
ERV3-1-201ENST00000394323 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
ERV3-1-201ENST00000394323 CECR2Q9BXF3 1484 aa14.83□□□□□ -0.04
ERV3-1-201ENST00000394323 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
ERV3-1-201ENST00000394323 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
ERV3-1-201ENST00000394323 MROH2BQ7Z745 1585 aa14.78□□□□□ -0.04
ERV3-1-201ENST00000394323 RSF1Q96T23 1441 aaPredicted RBP14.77□□□□□ -0.05
ERV3-1-201ENST00000394323 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
ERV3-1-201ENST00000394323 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
ERV3-1-201ENST00000394323 ATAD2BQ9ULI0 1458 aa14.64□□□□□ -0.07
ERV3-1-201ENST00000394323 WIZO95785 1651 aa14.63□□□□□ -0.07
ERV3-1-201ENST00000394323 TOP2AP11388 1531 aaKnown RBP14.63□□□□□ -0.07
ERV3-1-201ENST00000394323 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
ERV3-1-201ENST00000394323 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
ERV3-1-201ENST00000394323 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
ERV3-1-201ENST00000394323 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
ERV3-1-201ENST00000394323 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
ERV3-1-201ENST00000394323 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
ERV3-1-201ENST00000394323 CFTRP13569 1480 aa14.2□□□□□ -0.14
ERV3-1-201ENST00000394323 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
ERV3-1-201ENST00000394323 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
ERV3-1-201ENST00000394323 CADPSQ9ULU8 1353 aa14.11□□□□□ -0.15
ERV3-1-201ENST00000394323 BIVM-ERCC5R4GMW8 1640 aa14□□□□□ -0.17
ERV3-1-201ENST00000394323 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
ERV3-1-201ENST00000394323 NESP48681 1621 aa13.94□□□□□ -0.18
ERV3-1-201ENST00000394323 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
ERV3-1-201ENST00000394323 TOP2BQ02880 1626 aa13.94□□□□□ -0.18
ERV3-1-201ENST00000394323 KIF21AQ7Z4S6 1674 aa13.93□□□□□ -0.18
ERV3-1-201ENST00000394323 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
ERV3-1-201ENST00000394323 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
ERV3-1-201ENST00000394323 CEP164Q9UPV0 1460 aa13.89□□□□□ -0.19
ERV3-1-201ENST00000394323 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
ERV3-1-201ENST00000394323 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
ERV3-1-201ENST00000394323 CUX1P39880 1505 aa13.88□□□□□ -0.19
ERV3-1-201ENST00000394323 WDR62O43379 1518 aa13.87□□□□□ -0.19
ERV3-1-201ENST00000394323 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.19
ERV3-1-201ENST00000394323 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
ERV3-1-201ENST00000394323 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
ERV3-1-201ENST00000394323 TOPBP1Q92547 1522 aa13.81□□□□□ -0.2
ERV3-1-201ENST00000394323 CHIC1Q5VXU3 224 aa13.8□□□□□ -0.2
ERV3-1-201ENST00000394323 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
ERV3-1-201ENST00000394323 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
ERV3-1-201ENST00000394323 FGD5Q6ZNL6 1462 aa13.71□□□□□ -0.22
ERV3-1-201ENST00000394323 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
ERV3-1-201ENST00000394323 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
ERV3-1-201ENST00000394323 EEA1Q15075 1411 aa13.7□□□□□ -0.22
ERV3-1-201ENST00000394323 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
ERV3-1-201ENST00000394323 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
ERV3-1-201ENST00000394323 CUX2O14529 1486 aa13.66□□□□□ -0.22
ERV3-1-201ENST00000394323 IFT140Q96RY7 1462 aa13.65□□□□□ -0.22
ERV3-1-201ENST00000394323 TRIM41Q8WV44 630 aa13.6□□□□□ -0.23
ERV3-1-201ENST00000394323 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
ERV3-1-201ENST00000394323 KIF21BO75037 1637 aa13.56□□□□□ -0.24
ERV3-1-201ENST00000394323 SOGA1O94964 1423 aa13.56□□□□□ -0.24
ERV3-1-201ENST00000394323 CUL7Q14999 1698 aa13.55□□□□□ -0.24
ERV3-1-201ENST00000394323 KIF27Q86VH2 1401 aa13.54□□□□□ -0.24
ERV3-1-201ENST00000394323 PBRM1Q86U86 1689 aa13.54□□□□□ -0.24
ERV3-1-201ENST00000394323 RAD54L2Q9Y4B4 1467 aa13.53□□□□□ -0.24
ERV3-1-201ENST00000394323 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
ERV3-1-201ENST00000394323 PRXQ9BXM0 1461 aa13.5□□□□□ -0.25
ERV3-1-201ENST00000394323 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
ERV3-1-201ENST00000394323 ADAMTS12P58397 1594 aa13.47□□□□□ -0.25
ERV3-1-201ENST00000394323 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.25
ERV3-1-201ENST00000394323 GRIN2BQ13224 1484 aa13.45□□□□□ -0.26
ERV3-1-201ENST00000394323 IGF1RP08069 1367 aa13.43□□□□□ -0.26
ERV3-1-201ENST00000394323 MAGI1Q96QZ7 1491 aaPredicted RBP13.43□□□□□ -0.26
ERV3-1-201ENST00000394323 ZNF608Q9ULD9 1512 aaPredicted RBP13.43□□□□□ -0.26
ERV3-1-201ENST00000394323 GOLGA3Q08378 1498 aa13.38□□□□□ -0.27
ERV3-1-201ENST00000394323 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
ERV3-1-201ENST00000394323 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
ERV3-1-201ENST00000394323 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
ERV3-1-201ENST00000394323 AQRO60306 1485 aaKnown RBP eCLIP13.35□□□□□ -0.272e-11■■■■□ 19.6
ERV3-1-201ENST00000394323 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
ERV3-1-201ENST00000394323 CTTNBP2Q8WZ74 1663 aa13.33□□□□□ -0.28
ERV3-1-201ENST00000394323 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
ERV3-1-201ENST00000394323 SNAPC4Q5SXM2 1469 aa13.33□□□□□ -0.28
ERV3-1-201ENST00000394323 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
ERV3-1-201ENST00000394323 TNIKQ9UKE5 1360 aa13.3□□□□□ -0.28
ERV3-1-201ENST00000394323 GRIN2AQ12879 1464 aa13.28□□□□□ -0.28
ERV3-1-201ENST00000394323 NUP160Q12769 1436 aa13.28□□□□□ -0.28
ERV3-1-201ENST00000394323 CHD1O14646 1710 aa13.25□□□□□ -0.29
ERV3-1-201ENST00000394323 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
ERV3-1-201ENST00000394323 SAMD9Q5K651 1589 aa13.22□□□□□ -0.29
ERV3-1-201ENST00000394323 SHROOM2Q13796 1616 aa13.22□□□□□ -0.29
ERV3-1-201ENST00000394323 EFCAB5A4FU69 1503 aa13.21□□□□□ -0.29
ERV3-1-201ENST00000394323 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms