RNA–Protein interactions for RNA: ENST00000393337.7

ZNF44-204, Transcript of zinc finger protein 44, humanhuman

TSL 1 (best)

Gene ZNF44, Length 3,236 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF44-204ENST00000393337 NISCHQ9Y2I1 1504 aa19.36■□□□□ 0.69
ZNF44-204ENST00000393337 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
ZNF44-204ENST00000393337 DCAF8L2P0C7V8 631 aa16.58■□□□□ 0.24
ZNF44-204ENST00000393337 CCDC180Q9P1Z9 1646 aa16.44■□□□□ 0.22
ZNF44-204ENST00000393337 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.2
ZNF44-204ENST00000393337 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
ZNF44-204ENST00000393337 ABCC9O60706 1549 aa15.87■□□□□ 0.13
ZNF44-204ENST00000393337 PELP1Q8IZL8 1130 aaKnown RBP15.72■□□□□ 0.11
ZNF44-204ENST00000393337 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
ZNF44-204ENST00000393337 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
ZNF44-204ENST00000393337 HRCP23327 699 aa15.61■□□□□ 0.09
ZNF44-204ENST00000393337 PPARGC1BQ86YN6 1023 aaKnown RBP15.42■□□□□ 0.06
ZNF44-204ENST00000393337 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.05
ZNF44-204ENST00000393337 NACADO15069 1562 aa15.36■□□□□ 0.05
ZNF44-204ENST00000393337 MYO15BQ96JP2 1530 aa15.34■□□□□ 0.05
ZNF44-204ENST00000393337 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
ZNF44-204ENST00000393337 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
ZNF44-204ENST00000393337 PCGF6Q9BYE7 350 aa15.24■□□□□ 0.03
ZNF44-204ENST00000393337 MYT1Q01538 1121 aa15.23■□□□□ 0.03
ZNF44-204ENST00000393337 RB1CC1Q8TDY2 1594 aa15.22■□□□□ 0.03
ZNF44-204ENST00000393337 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
ZNF44-204ENST00000393337 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
ZNF44-204ENST00000393337 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
ZNF44-204ENST00000393337 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ 0
ZNF44-204ENST00000393337 EHMT2Q96KQ7 1210 aa15.02□□□□□ -0.01
ZNF44-204ENST00000393337 FAM9AQ8IZU1 332 aaPredicted RBP15□□□□□ -0.01
ZNF44-204ENST00000393337 WIZO95785 1651 aa15□□□□□ -0.01
ZNF44-204ENST00000393337 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
ZNF44-204ENST00000393337 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
ZNF44-204ENST00000393337 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
ZNF44-204ENST00000393337 BICRAQ9NZM4 1560 aa14.83□□□□□ -0.04
ZNF44-204ENST00000393337 SMARCA4P51532 1647 aa14.79□□□□□ -0.04
ZNF44-204ENST00000393337 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
ZNF44-204ENST00000393337 TOP2AP11388 1531 aaKnown RBP14.67□□□□□ -0.06
ZNF44-204ENST00000393337 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
ZNF44-204ENST00000393337 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
ZNF44-204ENST00000393337 ACIN1Q9UKV3 1341 aaKnown RBP14.56□□□□□ -0.08
ZNF44-204ENST00000393337 ATAD2BQ9ULI0 1458 aa14.55□□□□□ -0.08
ZNF44-204ENST00000393337 GTF3C3Q9Y5Q9 886 aa14.54□□□□□ -0.08
ZNF44-204ENST00000393337 NEUROD1Q13562 356 aa14.53□□□□□ -0.08
ZNF44-204ENST00000393337 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.09
ZNF44-204ENST00000393337 EIF4G1Q04637 1599 aaKnown RBP14.5□□□□□ -0.09
ZNF44-204ENST00000393337 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
ZNF44-204ENST00000393337 TRIM26Q12899 539 aaPredicted RBP14.48□□□□□ -0.09
ZNF44-204ENST00000393337 SOGA1O94964 1423 aa14.44□□□□□ -0.1
ZNF44-204ENST00000393337 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
ZNF44-204ENST00000393337 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
ZNF44-204ENST00000393337 RUSC2Q8N2Y8 1516 aa14.4□□□□□ -0.1
ZNF44-204ENST00000393337 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
ZNF44-204ENST00000393337 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
ZNF44-204ENST00000393337 CENPBP07199 599 aaPredicted RBP14.36□□□□□ -0.11
ZNF44-204ENST00000393337 RANGAP1P46060 587 aaPredicted RBP14.34□□□□□ -0.11
ZNF44-204ENST00000393337 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
ZNF44-204ENST00000393337 BCL11AQ9H165 835 aa14.3□□□□□ -0.12
ZNF44-204ENST00000393337 SYNJ1O43426 1573 aa14.27□□□□□ -0.12
ZNF44-204ENST00000393337 NCAPD3P42695 1498 aa14.26□□□□□ -0.13
ZNF44-204ENST00000393337 HMGXB3Q12766 1538 aa14.17□□□□□ -0.14
ZNF44-204ENST00000393337 CEP162Q5TB80 1403 aa14.17□□□□□ -0.14
ZNF44-204ENST00000393337 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
ZNF44-204ENST00000393337 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.15
ZNF44-204ENST00000393337 DIEXFQ68CQ4 756 aaKnown RBP14.12□□□□□ -0.15
ZNF44-204ENST00000393337 EEA1Q15075 1411 aa14.11□□□□□ -0.15
ZNF44-204ENST00000393337 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
ZNF44-204ENST00000393337 YTHDC1Q96MU7 727 aaKnown RBP14.09□□□□□ -0.15
ZNF44-204ENST00000393337 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
ZNF44-204ENST00000393337 CFTRP13569 1480 aa14.08□□□□□ -0.16
ZNF44-204ENST00000393337 RAPGEF2Q9Y4G8 1499 aa14.06□□□□□ -0.16
ZNF44-204ENST00000393337 CUX1P39880 1505 aa14.06□□□□□ -0.16
ZNF44-204ENST00000393337 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
ZNF44-204ENST00000393337 PRKCSHP14314 528 aaPredicted RBP14.04□□□□□ -0.16
ZNF44-204ENST00000393337 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
ZNF44-204ENST00000393337 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
ZNF44-204ENST00000393337 NESP48681 1621 aa14.02□□□□□ -0.17
ZNF44-204ENST00000393337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
ZNF44-204ENST00000393337 CLIP1P30622 1438 aa13.99□□□□□ -0.17
ZNF44-204ENST00000393337 ANP32EQ9BTT0 268 aa13.98□□□□□ -0.17
ZNF44-204ENST00000393337 BIVM-ERCC5R4GMW8 1640 aa13.95□□□□□ -0.18
ZNF44-204ENST00000393337 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
ZNF44-204ENST00000393337 KIF27Q86VH2 1401 aa13.93□□□□□ -0.18
ZNF44-204ENST00000393337 CUX2O14529 1486 aa13.93□□□□□ -0.18
ZNF44-204ENST00000393337 FANCD2Q9BXW9 1451 aa13.92□□□□□ -0.18
ZNF44-204ENST00000393337 APLP2Q06481 763 aa13.92□□□□□ -0.18
ZNF44-204ENST00000393337 KIF21BO75037 1637 aa13.92□□□□□ -0.18
ZNF44-204ENST00000393337 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.19
ZNF44-204ENST00000393337 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
ZNF44-204ENST00000393337 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
ZNF44-204ENST00000393337 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
ZNF44-204ENST00000393337 P3H3Q8IVL6 736 aa13.86□□□□□ -0.19
ZNF44-204ENST00000393337 IGF1RP08069 1367 aa13.84□□□□□ -0.19
ZNF44-204ENST00000393337 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
ZNF44-204ENST00000393337 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
ZNF44-204ENST00000393337 CARMIL1Q5VZK9 1371 aa13.8□□□□□ -0.2
ZNF44-204ENST00000393337 KANK4Q5T7N3 995 aaPredicted RBP13.78□□□□□ -0.2
ZNF44-204ENST00000393337 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.2
ZNF44-204ENST00000393337 PRDM2Q13029 1718 aa13.77□□□□□ -0.2
ZNF44-204ENST00000393337 TOPBP1Q92547 1522 aa13.77□□□□□ -0.21
ZNF44-204ENST00000393337 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
ZNF44-204ENST00000393337 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
ZNF44-204ENST00000393337 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
ZNF44-204ENST00000393337 URB2Q14146 1524 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms