RNA–Protein interactions for RNA: ENST00000393218.6

LGMN-202, Transcript of legumain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGMN, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-202ENST00000393218 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
LGMN-202ENST00000393218 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
LGMN-202ENST00000393218 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
LGMN-202ENST00000393218 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
LGMN-202ENST00000393218 DCAF8L2P0C7V8 631 aa30.39■■■□□ 2.46
LGMN-202ENST00000393218 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
LGMN-202ENST00000393218 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
LGMN-202ENST00000393218 MYO15BQ96JP2 1530 aa29.61■■■□□ 2.33
LGMN-202ENST00000393218 ABCC9O60706 1549 aa29.44■■■□□ 2.3
LGMN-202ENST00000393218 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
LGMN-202ENST00000393218 NACADO15069 1562 aa29.27■■■□□ 2.28
LGMN-202ENST00000393218 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
LGMN-202ENST00000393218 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
LGMN-202ENST00000393218 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
LGMN-202ENST00000393218 CECR2Q9BXF3 1484 aa28.61■■■□□ 2.17
LGMN-202ENST00000393218 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
LGMN-202ENST00000393218 UNC13AQ9UPW8 1703 aa28.36■■■□□ 2.13
LGMN-202ENST00000393218 WIZO95785 1651 aa28.28■■■□□ 2.12
LGMN-202ENST00000393218 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
LGMN-202ENST00000393218 BICRAQ9NZM4 1560 aa28.07■■■□□ 2.08
LGMN-202ENST00000393218 SMARCA4P51532 1647 aa28.06■■■□□ 2.08
LGMN-202ENST00000393218 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
LGMN-202ENST00000393218 LOC105371045A0A1W2PR82 267 aa28.02■■■□□ 2.08
LGMN-202ENST00000393218 TRIM41Q8WV44 630 aa28.01■■■□□ 2.07
LGMN-202ENST00000393218 TOP2AP11388 1531 aaKnown RBP27.9■■■□□ 2.06
LGMN-202ENST00000393218 CCDC88BA6NC98 1476 aa27.75■■■□□ 2.03
LGMN-202ENST00000393218 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
LGMN-202ENST00000393218 SMARCA2P51531 1590 aa27.71■■■□□ 2.03
LGMN-202ENST00000393218 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.01
LGMN-202ENST00000393218 FAM9AQ8IZU1 332 aaPredicted RBP27.64■■■□□ 2.01
LGMN-202ENST00000393218 ATAD2BQ9ULI0 1458 aa27.48■■□□□ 1.99
LGMN-202ENST00000393218 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
LGMN-202ENST00000393218 ABCC8Q09428 1581 aa27.42■■□□□ 1.98
LGMN-202ENST00000393218 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
LGMN-202ENST00000393218 EHMT2Q96KQ7 1210 aa27.3■■□□□ 1.96
LGMN-202ENST00000393218 HRCP23327 699 aa27.19■■□□□ 1.94
LGMN-202ENST00000393218 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
LGMN-202ENST00000393218 SOGA1O94964 1423 aa27.1■■□□□ 1.93
LGMN-202ENST00000393218 WRNQ14191 1432 aaPredicted RBP eCLIP27.1■■□□□ 1.93
LGMN-202ENST00000393218 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
LGMN-202ENST00000393218 HMGXB3Q12766 1538 aa27.02■■□□□ 1.92
LGMN-202ENST00000393218 EEA1Q15075 1411 aa27■■□□□ 1.91
LGMN-202ENST00000393218 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
LGMN-202ENST00000393218 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
LGMN-202ENST00000393218 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
LGMN-202ENST00000393218 TNIKQ9UKE5 1360 aa26.83■■□□□ 1.89
LGMN-202ENST00000393218 CEP162Q5TB80 1403 aa26.75■■□□□ 1.87
LGMN-202ENST00000393218 TOP2BQ02880 1626 aa26.74■■□□□ 1.87
LGMN-202ENST00000393218 UBTFP17480 764 aaKnown RBP26.73■■□□□ 1.87
LGMN-202ENST00000393218 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
LGMN-202ENST00000393218 CFTRP13569 1480 aa26.7■■□□□ 1.86
LGMN-202ENST00000393218 PPARGC1BQ86YN6 1023 aaKnown RBP26.68■■□□□ 1.86
LGMN-202ENST00000393218 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
LGMN-202ENST00000393218 CEP164Q9UPV0 1460 aa26.64■■□□□ 1.86
LGMN-202ENST00000393218 KIF21BO75037 1637 aa26.62■■□□□ 1.85
LGMN-202ENST00000393218 CC2D2AQ9P2K1 1620 aa26.58■■□□□ 1.85
LGMN-202ENST00000393218 CUX1P39880 1505 aa26.56■■□□□ 1.84
LGMN-202ENST00000393218 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
LGMN-202ENST00000393218 RAPGEF2Q9Y4G8 1499 aa26.47■■□□□ 1.83
LGMN-202ENST00000393218 PRDM2Q13029 1718 aa26.45■■□□□ 1.83
LGMN-202ENST00000393218 ZEB1P37275 1124 aaPredicted RBP26.39■■□□□ 1.82
LGMN-202ENST00000393218 CLIP1P30622 1438 aa26.38■■□□□ 1.81
LGMN-202ENST00000393218 PRXQ9BXM0 1461 aa26.35■■□□□ 1.81
LGMN-202ENST00000393218 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
LGMN-202ENST00000393218 ERICH3Q5RHP9 1530 aa26.3■■□□□ 1.8
LGMN-202ENST00000393218 TTBK1Q5TCY1 1321 aaPredicted RBP26.29■■□□□ 1.8
LGMN-202ENST00000393218 VPS8Q8N3P4 1428 aa26.21■■□□□ 1.79
LGMN-202ENST00000393218 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
LGMN-202ENST00000393218 RANGAP1P46060 587 aaPredicted RBP26.18■■□□□ 1.78
LGMN-202ENST00000393218 FGD5Q6ZNL6 1462 aa26.15■■□□□ 1.78
LGMN-202ENST00000393218 CUX2O14529 1486 aa26.14■■□□□ 1.78
LGMN-202ENST00000393218 IGF1RP08069 1367 aa26.12■■□□□ 1.77
LGMN-202ENST00000393218 NESP48681 1621 aa26.1■■□□□ 1.77
LGMN-202ENST00000393218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.09■■□□□ 1.77
LGMN-202ENST00000393218 APLP2Q06481 763 aa26.04■■□□□ 1.76
LGMN-202ENST00000393218 ARAP1Q96P48 1450 aa26.02■■□□□ 1.76
LGMN-202ENST00000393218 DNMBPQ6XZF7 1577 aa26.01■■□□□ 1.76
LGMN-202ENST00000393218 CCER1Q8TC90 406 aaPredicted RBP26.01■■□□□ 1.75
LGMN-202ENST00000393218 CARMIL1Q5VZK9 1371 aa25.98■■□□□ 1.75
LGMN-202ENST00000393218 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
LGMN-202ENST00000393218 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
LGMN-202ENST00000393218 DNAJC5BQ9UF47 199 aa25.97■■□□□ 1.75
LGMN-202ENST00000393218 RAD54L2Q9Y4B4 1467 aa25.92■■□□□ 1.74
LGMN-202ENST00000393218 POLA1P09884 1462 aaPredicted RBP25.92■■□□□ 1.74
LGMN-202ENST00000393218 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
LGMN-202ENST00000393218 ARHGAP35Q9NRY4 1499 aa25.89■■□□□ 1.74
LGMN-202ENST00000393218 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
LGMN-202ENST00000393218 PDS5BQ9NTI5 1447 aa25.82■■□□□ 1.72
LGMN-202ENST00000393218 HNRNPUL2Q1KMD3 747 aaKnown RBP25.79■■□□□ 1.72
LGMN-202ENST00000393218 KANK4Q5T7N3 995 aaPredicted RBP25.78■■□□□ 1.72
LGMN-202ENST00000393218 WDR97A6NE52 1622 aa25.68■■□□□ 1.7
LGMN-202ENST00000393218 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
LGMN-202ENST00000393218 CUL7Q14999 1698 aa25.66■■□□□ 1.7
LGMN-202ENST00000393218 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
LGMN-202ENST00000393218 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
LGMN-202ENST00000393218 GAPVD1Q14C86 1478 aa25.57■■□□□ 1.68
LGMN-202ENST00000393218 MAP3K1Q13233 1512 aa25.56■■□□□ 1.68
LGMN-202ENST00000393218 RRBP1Q9P2E9 1410 aaKnown RBP25.56■■□□□ 1.68
LGMN-202ENST00000393218 P3H3Q8IVL6 736 aa25.55■■□□□ 1.68
LGMN-202ENST00000393218 FHAD1B1AJZ9 1412 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms