RNA–Protein interactions for RNA: ENST00000392659.2

MRPL47-202, Transcript of mitochondrial ribosomal protein L47, humanhuman

TSL 1 (best) BASIC

Gene MRPL47, Length 673 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47-202ENST00000392659 AEBP2Q6ZN18 517 aaPredicted RBP32.53■■■□□ 2.8
MRPL47-202ENST00000392659 CHIC1Q5VXU3 224 aa31.5■■■□□ 2.63
MRPL47-202ENST00000392659 SENP3Q9H4L4 574 aaPredicted RBP27.83■■■□□ 2.05
MRPL47-202ENST00000392659 PHF23Q9BUL5 403 aaPredicted RBP27.57■■■□□ 2
MRPL47-202ENST00000392659 FOXD1Q16676 465 aa25.76■■□□□ 1.71
MRPL47-202ENST00000392659 PLPPR3Q6T4P5 718 aa25.48■■□□□ 1.67
MRPL47-202ENST00000392659 PPP6R1Q9UPN7 881 aa24.44■■□□□ 1.5
MRPL47-202ENST00000392659 ADRA2BP18089 450 aa24.43■■□□□ 1.5
MRPL47-202ENST00000392659 PIAS4Q8N2W9 510 aaPredicted RBP24.26■■□□□ 1.47
MRPL47-202ENST00000392659 MSH5O43196 834 aa24.04■■□□□ 1.44
MRPL47-202ENST00000392659 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
MRPL47-202ENST00000392659 POTEDQ86YR6 584 aa22.44■■□□□ 1.18
MRPL47-202ENST00000392659 PPP4R3CPQ6ZMV5 832 aa22.34■■□□□ 1.17
MRPL47-202ENST00000392659 MAPK8IP2Q13387 824 aaPredicted RBP22.24■■□□□ 1.15
MRPL47-202ENST00000392659 DMRT2Q9Y5R5 561 aa22.11■■□□□ 1.13
MRPL47-202ENST00000392659 CNKSR2Q8WXI2 1034 aa21.85■■□□□ 1.09
MRPL47-202ENST00000392659 NCBP3Q53F19 620 aaKnown RBP21.76■■□□□ 1.07
MRPL47-202ENST00000392659 RNF216Q9NWF9 866 aaPredicted RBP21.52■■□□□ 1.04
MRPL47-202ENST00000392659 HOXD11P31277 338 aaPredicted RBP21.5■■□□□ 1.03
MRPL47-202ENST00000392659 KCNA4P22459 653 aa21.35■■□□□ 1.01
MRPL47-202ENST00000392659 NPM3O75607 178 aaKnown RBP21.31■■□□□ 1
MRPL47-202ENST00000392659 DCAF8L1A6NGE4 600 aa21.19■□□□□ 0.98
MRPL47-202ENST00000392659 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
MRPL47-202ENST00000392659 NISCHQ9Y2I1 1504 aa20.72■□□□□ 0.91
MRPL47-202ENST00000392659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.88
MRPL47-202ENST00000392659 RNF39Q9H2S5 420 aa20.49■□□□□ 0.87
MRPL47-202ENST00000392659 SLC4A1APQ9BWU0 796 aaKnown RBP20.33■□□□□ 0.85
MRPL47-202ENST00000392659 C1QBPQ07021 282 aaKnown RBP20.29■□□□□ 0.84
MRPL47-202ENST00000392659 CACNB1Q02641 598 aaPredicted RBP20.26■□□□□ 0.83
MRPL47-202ENST00000392659 SLC4A2P04920 1241 aa20.18■□□□□ 0.82
MRPL47-202ENST00000392659 U3KPZ7 1027 aaPredicted RBP20.08■□□□□ 0.81
MRPL47-202ENST00000392659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
MRPL47-202ENST00000392659 HNRNPUL2Q1KMD3 747 aaKnown RBP19.86■□□□□ 0.77
MRPL47-202ENST00000392659 FOXD4L1Q9NU39 408 aa19.84■□□□□ 0.77
MRPL47-202ENST00000392659 APLP2Q06481 763 aa19.79■□□□□ 0.76
MRPL47-202ENST00000392659 MYCNP04198 464 aaPredicted RBP19.77■□□□□ 0.76
MRPL47-202ENST00000392659 SAMD1Q6SPF0 538 aaPredicted RBP19.74■□□□□ 0.75
MRPL47-202ENST00000392659 CAPN15O75808 1086 aa19.63■□□□□ 0.73
MRPL47-202ENST00000392659 SPINK5Q9NQ38 1064 aaPredicted RBP19.61■□□□□ 0.73
MRPL47-202ENST00000392659 ZBTB22O15209 634 aa19.59■□□□□ 0.73
MRPL47-202ENST00000392659 ZNF219Q9P2Y4 722 aaPredicted RBP19.49■□□□□ 0.71
MRPL47-202ENST00000392659 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
MRPL47-202ENST00000392659 DSG3P32926 999 aa19.35■□□□□ 0.69
MRPL47-202ENST00000392659 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
MRPL47-202ENST00000392659 ATXN8OSP0DMR3 200 aa19.23■□□□□ 0.67
MRPL47-202ENST00000392659 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
MRPL47-202ENST00000392659 ABCB7O75027 752 aa19.16■□□□□ 0.66
MRPL47-202ENST00000392659 ATF5Q9Y2D1 282 aaPredicted RBP19.13■□□□□ 0.65
MRPL47-202ENST00000392659 POLA2Q14181 598 aa19.02■□□□□ 0.64
MRPL47-202ENST00000392659 ZBTB12Q9Y330 459 aaPredicted RBP18.81■□□□□ 0.6
MRPL47-202ENST00000392659 RBM42Q9BTD8 480 aaKnown RBP18.57■□□□□ 0.56
MRPL47-202ENST00000392659 FBLN2P98095 1184 aa18.54■□□□□ 0.56
MRPL47-202ENST00000392659 ABCC9O60706 1549 aa18.47■□□□□ 0.55
MRPL47-202ENST00000392659 OSCARQ8IYS5 282 aa18.37■□□□□ 0.53
MRPL47-202ENST00000392659 MKRN4PQ13434 485 aaPredicted RBP18.31■□□□□ 0.52
MRPL47-202ENST00000392659 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
MRPL47-202ENST00000392659 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
MRPL47-202ENST00000392659 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
MRPL47-202ENST00000392659 AKT1S1Q96B36 256 aa18.21■□□□□ 0.51
MRPL47-202ENST00000392659 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
MRPL47-202ENST00000392659 ZNF692Q9BU19 519 aaPredicted RBP18.05■□□□□ 0.48
MRPL47-202ENST00000392659 REM2Q8IYK8 340 aaPredicted RBP17.99■□□□□ 0.47
MRPL47-202ENST00000392659 SSUH2Q9Y2M2 353 aa17.97■□□□□ 0.47
MRPL47-202ENST00000392659 CHRDL2Q6WN34 429 aa17.87■□□□□ 0.45
MRPL47-202ENST00000392659 SPDYE4A6NLX3 237 aa17.81■□□□□ 0.44
MRPL47-202ENST00000392659 PITPNM1O00562 1244 aa17.77■□□□□ 0.44
MRPL47-202ENST00000392659 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
MRPL47-202ENST00000392659 SPDYE1Q8NFV5 336 aaPredicted RBP17.77■□□□□ 0.44
MRPL47-202ENST00000392659 POTEHQ6S545 545 aa17.73■□□□□ 0.43
MRPL47-202ENST00000392659 CLEC11AQ9Y240 323 aa17.65■□□□□ 0.42
MRPL47-202ENST00000392659 FXR2P51116 673 aaKnown RBP eCLIP17.53■□□□□ 0.4
MRPL47-202ENST00000392659 PIP4P2Q8N4L2 257 aa17.53■□□□□ 0.4
MRPL47-202ENST00000392659 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
MRPL47-202ENST00000392659 PRR29P0C7W0 189 aa17.48■□□□□ 0.39
MRPL47-202ENST00000392659 FKBP8Q14318 412 aa17.43■□□□□ 0.38
MRPL47-202ENST00000392659 PROM2Q8N271 834 aa17.43■□□□□ 0.38
MRPL47-202ENST00000392659 DCAF8L2P0C7V8 631 aa17.39■□□□□ 0.37
MRPL47-202ENST00000392659 PRKAR2AP13861 404 aaKnown RBP17.34■□□□□ 0.37
MRPL47-202ENST00000392659 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
MRPL47-202ENST00000392659 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
MRPL47-202ENST00000392659 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
MRPL47-202ENST00000392659 HAX1O00165 279 aa17.11■□□□□ 0.33
MRPL47-202ENST00000392659 CREBZFQ9NS37 354 aa17.1■□□□□ 0.33
MRPL47-202ENST00000392659 NACADO15069 1562 aa17.07■□□□□ 0.32
MRPL47-202ENST00000392659 FARP1Q9Y4F1 1045 aaPredicted RBP17.07■□□□□ 0.32
MRPL47-202ENST00000392659 FBXO3Q9UK99 471 aa17.03■□□□□ 0.32
MRPL47-202ENST00000392659 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
MRPL47-202ENST00000392659 PLEKHG5O94827 1062 aa17■□□□□ 0.31
MRPL47-202ENST00000392659 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.31
MRPL47-202ENST00000392659 C19orf67A6NJJ6 358 aa16.95■□□□□ 0.3
MRPL47-202ENST00000392659 MIER1Q8N108 512 aa16.94■□□□□ 0.3
MRPL47-202ENST00000392659 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
MRPL47-202ENST00000392659 PLCD3Q8N3E9 789 aa16.89■□□□□ 0.29
MRPL47-202ENST00000392659 SP7Q8TDD2 431 aaPredicted RBP16.88■□□□□ 0.29
MRPL47-202ENST00000392659 MNX1P50219 401 aaPredicted RBP16.85■□□□□ 0.29
MRPL47-202ENST00000392659 CD44P16070 742 aaKnown RBP16.84■□□□□ 0.29
MRPL47-202ENST00000392659 ZBTB47Q9UFB7 747 aaPredicted RBP16.82■□□□□ 0.28
MRPL47-202ENST00000392659 EVX2Q03828 476 aa16.8■□□□□ 0.28
MRPL47-202ENST00000392659 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
MRPL47-202ENST00000392659 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms